RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 SOWAHBA6NEL2 793 aa22.27■■□□□ 1.16
CTDSP1-213ENST00000496785 PLEKHA8P1O95397 391 aa22.27■■□□□ 1.16
CTDSP1-213ENST00000496785 CENPFP49454 3210 aa22.27■■□□□ 1.16
CTDSP1-213ENST00000496785 METAP2P50579 478 aaKnown RBP eCLIP22.27■■□□□ 1.16
CTDSP1-213ENST00000496785 SLC35G1Q2M3R5 365 aa22.27■■□□□ 1.16
CTDSP1-213ENST00000496785 RAB11FIP4Q86YS3 637 aa22.27■■□□□ 1.16
CTDSP1-213ENST00000496785 SRBD1Q8N5C6 995 aaKnown RBP22.27■■□□□ 1.16
CTDSP1-213ENST00000496785 ZHX1Q9UKY1 873 aaPredicted RBP22.27■■□□□ 1.16
CTDSP1-213ENST00000496785 FAM184BQ9ULE4 1060 aa22.27■■□□□ 1.16
CTDSP1-213ENST00000496785 SNAI1O95863 264 aaPredicted RBP22.26■■□□□ 1.15
CTDSP1-213ENST00000496785 ALDH5A1P51649 535 aaPredicted RBP22.26■■□□□ 1.15
CTDSP1-213ENST00000496785 APOBRQ0VD83 1088 aa22.26■■□□□ 1.15
CTDSP1-213ENST00000496785 ACVR2BQ13705 512 aa22.26■■□□□ 1.15
CTDSP1-213ENST00000496785 LHX8Q68G74 356 aa22.26■■□□□ 1.15
CTDSP1-213ENST00000496785 PPP1R11O60927 126 aaPredicted RBP22.25■■□□□ 1.15
CTDSP1-213ENST00000496785 CFBP00751 764 aa22.25■■□□□ 1.15
CTDSP1-213ENST00000496785 ZNF865P0CJ78 1059 aaPredicted RBP22.25■■□□□ 1.15
CTDSP1-213ENST00000496785 RARBP10826 455 aa22.25■■□□□ 1.15
CTDSP1-213ENST00000496785 GHRHRQ02643 423 aa22.25■■□□□ 1.15
CTDSP1-213ENST00000496785 PRAMEF19Q5SWL8 479 aa22.25■■□□□ 1.15
CTDSP1-213ENST00000496785 ARRDC4Q8NCT1 418 aa22.25■■□□□ 1.15
CTDSP1-213ENST00000496785 NID2Q14112 1375 aa22.25■■□□□ 1.15
CTDSP1-213ENST00000496785 SMCHD1A6NHR9 2005 aa22.24■■□□□ 1.15
CTDSP1-213ENST00000496785 NECAB2Q7Z6G3 386 aa22.24■■□□□ 1.15
CTDSP1-213ENST00000496785 MORC4Q8TE76 937 aa22.24■■□□□ 1.15
CTDSP1-213ENST00000496785 PIBF1Q8WXW3 757 aa22.24■■□□□ 1.15
CTDSP1-213ENST00000496785 HTATIP2Q9BUP3 242 aa22.24■■□□□ 1.15
CTDSP1-213ENST00000496785 UPF3BQ9BZI7 483 aaKnown RBP22.24■■□□□ 1.15
CTDSP1-213ENST00000496785 VTA1Q9NP79 307 aa22.24■■□□□ 1.15
CTDSP1-213ENST00000496785 PDRG1Q9NUG6 133 aa22.24■■□□□ 1.15
CTDSP1-213ENST00000496785 HSD17B4P51659 736 aa22.23■■□□□ 1.15
CTDSP1-213ENST00000496785 EVCP57679 992 aa22.23■■□□□ 1.15
CTDSP1-213ENST00000496785 PDE4DQ08499 809 aa22.23■■□□□ 1.15
CTDSP1-213ENST00000496785 C8orf34Q49A92 452 aa22.23■■□□□ 1.15
CTDSP1-213ENST00000496785 CCDC82Q8N4S0 544 aa22.23■■□□□ 1.15
CTDSP1-213ENST00000496785 SYTL5Q8TDW5 730 aaPredicted RBP22.23■■□□□ 1.15
CTDSP1-213ENST00000496785 NSUN6Q8TEA1 469 aaKnown RBP22.23■■□□□ 1.15
CTDSP1-213ENST00000496785 RBM27Q9P2N5 1060 aaKnown RBP22.23■■□□□ 1.15
CTDSP1-213ENST00000496785 GCOM1H8Y6P7 765 aaPredicted RBP22.22■■□□□ 1.15
CTDSP1-213ENST00000496785 hCG_1984214I3L0E3 225 aa22.22■■□□□ 1.15
CTDSP1-213ENST00000496785 POLR2MP0CAP2 368 aa22.22■■□□□ 1.15
CTDSP1-213ENST00000496785 ANKRD1Q15327 319 aa22.22■■□□□ 1.15
CTDSP1-213ENST00000496785 CMTR1Q8N1G2 835 aaKnown RBP22.22■■□□□ 1.15
CTDSP1-213ENST00000496785 ZNF713Q8N859 430 aaPredicted RBP22.22■■□□□ 1.15
CTDSP1-213ENST00000496785 CUL5Q93034 780 aa22.22■■□□□ 1.15
CTDSP1-213ENST00000496785 IL17RAQ96F46 866 aa22.22■■□□□ 1.15
CTDSP1-213ENST00000496785 XPNPEP3Q9NQH7 507 aa22.22■■□□□ 1.15
CTDSP1-213ENST00000496785 ASTN1O14525 1302 aa22.22■■□□□ 1.15
CTDSP1-213ENST00000496785 CNTNAP5Q8WYK1 1306 aa22.22■■□□□ 1.15
CTDSP1-213ENST00000496785 KBTBD13C9JR72 458 aa22.21■■□□□ 1.15
CTDSP1-213ENST00000496785 UBE2Q1Q7Z7E8 422 aa22.21■■□□□ 1.15
CTDSP1-213ENST00000496785 TEX2Q8IWB9 1127 aa22.21■■□□□ 1.15
CTDSP1-213ENST00000496785 IWS1Q96ST2 819 aa22.21■■□□□ 1.15
CTDSP1-213ENST00000496785 RMDN3Q96TC7 470 aa22.21■■□□□ 1.15
CTDSP1-213ENST00000496785 SPC25Q9HBM1 224 aa22.21■■□□□ 1.15
CTDSP1-213ENST00000496785 FRMPD3Q5JV73 1810 aa22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 DNM1LO00429 736 aa22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 OPLAHO14841 1288 aa22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 DUSP11O75319 330 aaKnown RBP22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 EDNRBP24530 442 aa22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 TOB2Q14106 344 aaPredicted RBP22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 CCDC144BQ3MJ40 725 aa22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 ARHGEF16Q5VV41 709 aa22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 RNF180Q86T96 592 aa22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 TBC1D5Q92609 795 aa22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 ZNF274Q96GC6 653 aaPredicted RBP22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 PAWRQ96IZ0 340 aaKnown RBP22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 PURBQ96QR8 312 aaKnown RBP22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 KATNBL1Q9H079 304 aa22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 ALDH8A1Q9H2A2 487 aaPredicted RBP22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 C11orf49Q9H6J7 331 aa22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 UPF2Q9HAU5 1272 aaKnown RBP22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 BAZ2BQ9UIF8 2168 aaKnown RBP22.2■■□□□ 1.14
CTDSP1-213ENST00000496785 LCTP09848 1927 aa22.19■■□□□ 1.14
CTDSP1-213ENST00000496785 SEC24BO95487 1268 aa22.19■■□□□ 1.14
CTDSP1-213ENST00000496785 PDIA3P30101 505 aaKnown RBP22.19■■□□□ 1.14
CTDSP1-213ENST00000496785 CDC27P30260 824 aa22.19■■□□□ 1.14
CTDSP1-213ENST00000496785 AKAP17AQ02040 695 aaKnown RBP22.19■■□□□ 1.14
CTDSP1-213ENST00000496785 ANO1Q5XXA6 986 aa22.19■■□□□ 1.14
CTDSP1-213ENST00000496785 IQSEC1Q6DN90 963 aa22.19■■□□□ 1.14
CTDSP1-213ENST00000496785 PPP1R18Q6NYC8 613 aa22.19■■□□□ 1.14
CTDSP1-213ENST00000496785 CPLX2Q6PUV4 134 aaKnown RBP22.19■■□□□ 1.14
CTDSP1-213ENST00000496785 MCM3APO60318 1980 aa22.18■■□□□ 1.14
CTDSP1-213ENST00000496785 ADD1P35611 737 aaKnown RBP22.18■■□□□ 1.14
CTDSP1-213ENST00000496785 TNFAIP2Q03169 654 aa22.18■■□□□ 1.14
CTDSP1-213ENST00000496785 HEATR3Q7Z4Q2 680 aa22.18■■□□□ 1.14
CTDSP1-213ENST00000496785 FBXO16Q8IX29 292 aaPredicted RBP22.18■■□□□ 1.14
CTDSP1-213ENST00000496785 SMARCC2Q8TAQ2 1214 aa22.18■■□□□ 1.14
CTDSP1-213ENST00000496785 TAAR1Q96RJ0 339 aa22.18■■□□□ 1.14
CTDSP1-213ENST00000496785 FAM217BQ9NTX9 383 aaPredicted RBP22.18■■□□□ 1.14
CTDSP1-213ENST00000496785 GTF3C3Q9Y5Q9 886 aa22.18■■□□□ 1.14
CTDSP1-213ENST00000496785 FUT2Q10981 343 aa22.17■■□□□ 1.14
CTDSP1-213ENST00000496785 STXBP2Q15833 593 aa22.17■■□□□ 1.14
CTDSP1-213ENST00000496785 NOL8Q76FK4 1167 aaKnown RBP22.17■■□□□ 1.14
CTDSP1-213ENST00000496785 EEPD1Q7L9B9 569 aa22.17■■□□□ 1.14
CTDSP1-213ENST00000496785 GLT8D2Q9H1C3 349 aa22.17■■□□□ 1.14
CTDSP1-213ENST00000496785 PXMP2Q9NR77 195 aa22.17■■□□□ 1.14
CTDSP1-213ENST00000496785 COL20A1Q9P218 1284 aa22.17■■□□□ 1.14
CTDSP1-213ENST00000496785 V9GY48 417 aaPredicted RBP22.17■■□□□ 1.14
CTDSP1-213ENST00000496785 LRRC37A2A6NM11 1700 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms