RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 ANKLE1Q8NAG6 615 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 FAM184AQ8NB25 1140 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 IPO9Q96P70 1041 aaKnown RBP9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 MAP3K14Q99558 947 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 LZTS2Q9BRK4 669 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 TINF2Q9BSI4 451 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 HTATIP2Q9BUP3 242 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 SLC26A6Q9BXS9 759 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 MAF1Q9H063 256 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 MRPL11Q9Y3B7 192 aaKnown RBP9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 RIPK3Q9Y572 518 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 ABCB11O95342 1321 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 SYNGAP1Q96PV0 1343 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 ZNFX1Q9P2E3 1918 aaKnown RBP9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 ZNF536O15090 1300 aa9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 FARP2O94887 1054 aaPredicted RBP9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 SLC34A2O95436 690 aa9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 CDC27P30260 824 aa9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 CYP2C19P33261 490 aa9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 TRIM32Q13049 653 aa9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 GRM4Q14833 912 aa9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 ZNF792Q3KQV3 632 aa9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 USH1GQ495M9 461 aa9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 MAP3K21Q5TCX8 1036 aa9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 RNF207Q6ZRF8 634 aa9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 FBXO11Q86XK2 927 aa9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 FBXL16Q8N461 479 aa9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 PHKBQ93100 1093 aa9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 AMNQ9BXJ7 453 aa9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 AGXT2Q9BYV1 514 aa9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 CPVLQ9H3G5 476 aa9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 RBM28Q9NW13 759 aaKnown RBP9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 SEC63Q9UGP8 760 aaKnown RBP9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 DDX20Q9UHI6 824 aaKnown RBP9.43□□□□□ -0.9
SMARCD3-215ENST00000496530 LOC102724159A0A0B4J2E5 919 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 PALM3A6NDB9 673 aaPredicted RBP9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 ZBTB5O15062 677 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 SEPT4O43236 478 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 CDKL5O76039 1030 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 PLEKHA8P1O95397 391 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 AKR1A1P14550 325 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 CCND3P30281 292 aaPredicted RBP9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 TROAPQ12815 778 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 PPP2R5BQ15173 497 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 PWP2Q15269 919 aaKnown RBP9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 NECAB2Q7Z6G3 386 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 HOMER1Q86YM7 354 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 TRIM22Q8IYM9 498 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 SRBD1Q8N5C6 995 aaKnown RBP9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 SAMD3Q8N6K7 520 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 ARRDC4Q8NCT1 418 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 RRP36Q96EU6 259 aaKnown RBP9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 SPC25Q9HBM1 224 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 A1CFQ9NQ94 594 aaKnown RBP9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 FLRT1Q9NZU1 646 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 ORC3Q9UBD5 711 aaPredicted RBP9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 MAD2L2Q9UI95 211 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 MYH6P13533 1939 aa9.42□□□□□ -0.9
SMARCD3-215ENST00000496530 DNAJC25-GNG10A0A024R161 153 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 KBTBD13C9JR72 458 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 JAK2O60674 1132 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 RARBP10826 455 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 CYBAP13498 195 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 CALML3P27482 149 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 SMARCA1P28370 1054 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 GJB2P29033 226 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 EVCP57679 992 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 QRICH1Q2TAL8 776 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 MUM1L1Q5H9M0 696 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 FOXD4L5Q5VV16 416 aaPredicted RBP9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 LARP1BQ659C4 914 aaKnown RBP9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 MAMDC4Q6UXC1 1216 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 RGS22Q8NE09 1264 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 DNERQ8NFT8 737 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 FOXD4L4Q8WXT5 416 aaPredicted RBP9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 GTF3C6Q969F1 213 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 CRISPLD2Q9H0B8 497 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 ABHD16BQ9H3Z7 469 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 JMJD4Q9H9V9 463 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 FAM217BQ9NTX9 383 aaPredicted RBP9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 MAP3K20Q9NYL2 800 aaKnown RBP9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 CYP39A1Q9NYL5 469 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 PCDH10Q9P2E7 1040 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 ZHX1Q9UKY1 873 aaPredicted RBP9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 FAM184BQ9ULE4 1060 aa9.41□□□□□ -0.9
SMARCD3-215ENST00000496530 PNMA6FA0A0J9YX94 578 aa9.4□□□□□ -0.9
SMARCD3-215ENST00000496530 H3BQV1 296 aa9.4□□□□□ -0.9
SMARCD3-215ENST00000496530 MYCNP04198 464 aaPredicted RBP9.4□□□□□ -0.9
SMARCD3-215ENST00000496530 RCAN1P53805 252 aa9.4□□□□□ -0.9
SMARCD3-215ENST00000496530 GUCY1B3Q02153 619 aa9.4□□□□□ -0.9
SMARCD3-215ENST00000496530 TRIM29Q14134 588 aa9.4□□□□□ -0.9
SMARCD3-215ENST00000496530 ARMCX2Q7L311 632 aa9.4□□□□□ -0.9
SMARCD3-215ENST00000496530 RNF180Q86T96 592 aa9.4□□□□□ -0.9
SMARCD3-215ENST00000496530 DPF3Q92784 378 aa9.4□□□□□ -0.9
SMARCD3-215ENST00000496530 CUL5Q93034 780 aa9.4□□□□□ -0.9
SMARCD3-215ENST00000496530 PIGSQ96S52 555 aa9.4□□□□□ -0.9
SMARCD3-215ENST00000496530 LLPHQ9BRT6 129 aaKnown RBP9.4□□□□□ -0.9
SMARCD3-215ENST00000496530 SPZ1Q9BXG8 430 aa9.4□□□□□ -0.9
SMARCD3-215ENST00000496530 RIOX1Q9H6W3 641 aa9.4□□□□□ -0.9
SMARCD3-215ENST00000496530 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms