RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 TAF6LQ9Y6J9 622 aa16.72■□□□□ 0.27
VTI1A-209ENST00000496445 A0A0U1RQG5 324 aaPredicted RBP16.71■□□□□ 0.27
VTI1A-209ENST00000496445 CYP21A2P08686 494 aa16.71■□□□□ 0.27
VTI1A-209ENST00000496445 CALML3P27482 149 aa16.71■□□□□ 0.27
VTI1A-209ENST00000496445 CDK7P50613 346 aa16.71■□□□□ 0.27
VTI1A-209ENST00000496445 RPS6P62753 249 aaKnown RBP16.71■□□□□ 0.27
VTI1A-209ENST00000496445 SEC23AQ15436 765 aa16.71■□□□□ 0.27
VTI1A-209ENST00000496445 SHHQ15465 462 aa16.71■□□□□ 0.27
VTI1A-209ENST00000496445 USH1GQ495M9 461 aa16.71■□□□□ 0.27
VTI1A-209ENST00000496445 ASPRV1Q53RT3 343 aa16.71■□□□□ 0.27
VTI1A-209ENST00000496445 RNF207Q6ZRF8 634 aa16.71■□□□□ 0.27
VTI1A-209ENST00000496445 ADGRF4Q8IZF3 695 aa16.71■□□□□ 0.27
VTI1A-209ENST00000496445 ADD3Q9UEY8 706 aaKnown RBP16.71■□□□□ 0.27
VTI1A-209ENST00000496445 TBX21Q9UL17 535 aa16.71■□□□□ 0.27
VTI1A-209ENST00000496445 PNMA2Q9UL42 364 aa16.71■□□□□ 0.27
VTI1A-209ENST00000496445 KIAA1217Q5T5P2 1943 aa16.7■□□□□ 0.26
VTI1A-209ENST00000496445 LOC102724159A0A0B4J2E5 919 aa16.7■□□□□ 0.26
VTI1A-209ENST00000496445 SGSM2O43147 1006 aa16.7■□□□□ 0.26
VTI1A-209ENST00000496445 EDNRBP24530 442 aa16.7■□□□□ 0.26
VTI1A-209ENST00000496445 EPHB4P54760 987 aa16.7■□□□□ 0.26
VTI1A-209ENST00000496445 PWP2Q15269 919 aaKnown RBP16.7■□□□□ 0.26
VTI1A-209ENST00000496445 FSCN1Q16658 493 aaKnown RBP16.7■□□□□ 0.26
VTI1A-209ENST00000496445 NOL8Q76FK4 1167 aaKnown RBP16.7■□□□□ 0.26
VTI1A-209ENST00000496445 UBAC1Q9BSL1 405 aa16.7■□□□□ 0.26
VTI1A-209ENST00000496445 TMEM39AQ9NV64 488 aa16.7■□□□□ 0.26
VTI1A-209ENST00000496445 DCDC2CA8MYV0 355 aa16.69■□□□□ 0.26
VTI1A-209ENST00000496445 ARVCFO00192 962 aa16.69■□□□□ 0.26
VTI1A-209ENST00000496445 PARP1P09874 1014 aaKnown RBP16.69■□□□□ 0.26
VTI1A-209ENST00000496445 QRICH1Q2TAL8 776 aa16.69■□□□□ 0.26
VTI1A-209ENST00000496445 DUSP28Q4G0W2 176 aa16.69■□□□□ 0.26
VTI1A-209ENST00000496445 IFIT1BQ5T764 474 aaKnown RBP16.69■□□□□ 0.26
VTI1A-209ENST00000496445 IQSEC1Q6DN90 963 aa16.69■□□□□ 0.26
VTI1A-209ENST00000496445 CXCL17Q6UXB2 119 aa16.69■□□□□ 0.26
VTI1A-209ENST00000496445 KIAA1211Q6ZU35 1233 aa16.69■□□□□ 0.26
VTI1A-209ENST00000496445 STOX1Q6ZVD7 989 aa16.69■□□□□ 0.26
VTI1A-209ENST00000496445 FAM126BQ8IXS8 530 aa16.69■□□□□ 0.26
VTI1A-209ENST00000496445 STAG2Q8N3U4 1231 aa16.69■□□□□ 0.26
VTI1A-209ENST00000496445 DEFB123Q8N688 67 aa16.69■□□□□ 0.26
VTI1A-209ENST00000496445 RUFY2Q8WXA3 655 aa16.69■□□□□ 0.26
VTI1A-209ENST00000496445 MROH7Q68CQ1 1323 aa16.69■□□□□ 0.26
VTI1A-209ENST00000496445 RBM47A0AV96 593 aaKnown RBP16.68■□□□□ 0.26
VTI1A-209ENST00000496445 DYNC1LI2O43237 492 aaPredicted RBP16.68■□□□□ 0.26
VTI1A-209ENST00000496445 RAG1P15918 1043 aa16.68■□□□□ 0.26
VTI1A-209ENST00000496445 SLC43A3Q8NBI5 491 aa16.68■□□□□ 0.26
VTI1A-209ENST00000496445 JMJD4Q9H9V9 463 aa16.68■□□□□ 0.26
VTI1A-209ENST00000496445 SENP2Q9HC62 589 aa16.68■□□□□ 0.26
VTI1A-209ENST00000496445 MAD2L2Q9UI95 211 aa16.68■□□□□ 0.26
VTI1A-209ENST00000496445 Q9Y3F1 56 aa16.68■□□□□ 0.26
VTI1A-209ENST00000496445 SPTBN5Q9NRC6 3674 aaKnown RBP16.68■□□□□ 0.26
VTI1A-209ENST00000496445 GRIN2DO15399 1336 aa16.68■□□□□ 0.26
VTI1A-209ENST00000496445 ABCB11O95342 1321 aa16.68■□□□□ 0.26
VTI1A-209ENST00000496445 SCN10AQ9Y5Y9 1956 aa16.68■□□□□ 0.26
VTI1A-209ENST00000496445 RGS22Q8NE09 1264 aa16.67■□□□□ 0.26
VTI1A-209ENST00000496445 DNERQ8NFT8 737 aa16.67■□□□□ 0.26
VTI1A-209ENST00000496445 TBC1D5Q92609 795 aa16.67■□□□□ 0.26
VTI1A-209ENST00000496445 VTI1AQ96AJ9 217 aa16.67■□□□□ 0.26
VTI1A-209ENST00000496445 WDR11Q9BZH6 1224 aa16.67■□□□□ 0.26
VTI1A-209ENST00000496445 AP5M1Q9H0R1 490 aa16.67■□□□□ 0.26
VTI1A-209ENST00000496445 COL20A1Q9P218 1284 aa16.67■□□□□ 0.26
VTI1A-209ENST00000496445 E7EWF7 191 aa16.66■□□□□ 0.26
VTI1A-209ENST00000496445 TIMP1P01033 207 aa16.66■□□□□ 0.26
VTI1A-209ENST00000496445 CD4P01730 458 aa16.66■□□□□ 0.26
VTI1A-209ENST00000496445 FPGSQ05932 587 aa16.66■□□□□ 0.26
VTI1A-209ENST00000496445 SLC35G1Q2M3R5 365 aa16.66■□□□□ 0.26
VTI1A-209ENST00000496445 MTMR8Q96EF0 704 aa16.66■□□□□ 0.26
VTI1A-209ENST00000496445 MTMR10Q9NXD2 777 aa16.66■□□□□ 0.26
VTI1A-209ENST00000496445 BAZ2BQ9UIF8 2168 aaKnown RBP16.66■□□□□ 0.26
VTI1A-209ENST00000496445 CHD9Q3L8U1 2897 aa16.65■□□□□ 0.26
VTI1A-209ENST00000496445 A0A0C4DFX4 3053 aa16.65■□□□□ 0.26
VTI1A-209ENST00000496445 PALM3A6NDB9 673 aaPredicted RBP16.65■□□□□ 0.26
VTI1A-209ENST00000496445 OPLAHO14841 1288 aa16.65■□□□□ 0.26
VTI1A-209ENST00000496445 PPP1R11O60927 126 aaPredicted RBP16.65■□□□□ 0.26
VTI1A-209ENST00000496445 CABYRO75952 493 aa16.65■□□□□ 0.26
VTI1A-209ENST00000496445 ANTXR2P58335 489 aa16.65■□□□□ 0.26
VTI1A-209ENST00000496445 PSMC6P62333 389 aa16.65■□□□□ 0.26
VTI1A-209ENST00000496445 PDE4DQ08499 809 aa16.65■□□□□ 0.26
VTI1A-209ENST00000496445 TRDNQ13061 729 aa16.65■□□□□ 0.26
VTI1A-209ENST00000496445 SYTL5Q8TDW5 730 aaPredicted RBP16.65■□□□□ 0.26
VTI1A-209ENST00000496445 MAP4K1Q92918 833 aa16.65■□□□□ 0.26
VTI1A-209ENST00000496445 VAT1LQ9HCJ6 419 aa16.65■□□□□ 0.26
VTI1A-209ENST00000496445 DHX16O60231 1041 aaKnown RBP16.64■□□□□ 0.25
VTI1A-209ENST00000496445 ARIH2O95376 493 aa16.64■□□□□ 0.25
VTI1A-209ENST00000496445 ITGA7Q13683 1181 aa16.64■□□□□ 0.25
VTI1A-209ENST00000496445 GRM4Q14833 912 aa16.64■□□□□ 0.25
VTI1A-209ENST00000496445 MFSD5Q6N075 450 aa16.64■□□□□ 0.25
VTI1A-209ENST00000496445 CHST3Q7LGC8 479 aa16.64■□□□□ 0.25
VTI1A-209ENST00000496445 SKAP1Q86WV1 359 aa16.64■□□□□ 0.25
VTI1A-209ENST00000496445 FBXO11Q86XK2 927 aa16.64■□□□□ 0.25
VTI1A-209ENST00000496445 MB21D2Q8IYB1 491 aaPredicted RBP16.64■□□□□ 0.25
VTI1A-209ENST00000496445 COPS5Q92905 334 aa16.64■□□□□ 0.25
VTI1A-209ENST00000496445 TAAR1Q96RJ0 339 aa16.64■□□□□ 0.25
VTI1A-209ENST00000496445 MAF1Q9H063 256 aa16.64■□□□□ 0.25
VTI1A-209ENST00000496445 RBM8AQ9Y5S9 174 aaKnown RBP16.64■□□□□ 0.25
VTI1A-209ENST00000496445 TANC1Q9C0D5 1861 aa16.63■□□□□ 0.25
VTI1A-209ENST00000496445 KLRF2D3W0D1 207 aa16.63■□□□□ 0.25
VTI1A-209ENST00000496445 IFIT3O14879 490 aaKnown RBP16.63■□□□□ 0.25
VTI1A-209ENST00000496445 TLR3O15455 904 aaKnown RBP16.63■□□□□ 0.25
VTI1A-209ENST00000496445 ZEB2O60315 1214 aa16.63■□□□□ 0.25
VTI1A-209ENST00000496445 PURAQ00577 322 aaKnown RBP16.63■□□□□ 0.25
VTI1A-209ENST00000496445 PPP2R5BQ15173 497 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms