RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	ITGA7	Q13683	1181 aa		9.37	□□□□□ -0.91
NVL-223	ENST00000496393	TTLL4	Q14679	1199 aa		9.37	□□□□□ -0.91
NVL-223	ENST00000496393	FSCN1	Q16658	493 aa	Known RBP	9.37	□□□□□ -0.91
NVL-223	ENST00000496393	DEFB128	Q7Z7B8	93 aa		9.37	□□□□□ -0.91
NVL-223	ENST00000496393	FBXO16	Q8IX29	292 aa	Predicted RBP	9.37	□□□□□ -0.91
NVL-223	ENST00000496393	PPP1R13L	Q8WUF5	828 aa		9.37	□□□□□ -0.91
NVL-223	ENST00000496393	CEP95	Q96GE4	821 aa		9.37	□□□□□ -0.91
NVL-223	ENST00000496393	HAUS7	Q99871	368 aa		9.37	□□□□□ -0.91
NVL-223	ENST00000496393	AP5M1	Q9H0R1	490 aa		9.37	□□□□□ -0.91
NVL-223	ENST00000496393	EPHX3	Q9H6B9	360 aa		9.37	□□□□□ -0.91
NVL-223	ENST00000496393	A1CF	Q9NQ94	594 aa	Known RBP	9.37	□□□□□ -0.91
NVL-223	ENST00000496393	PDGFC	Q9NRA1	345 aa		9.37	□□□□□ -0.91
NVL-223	ENST00000496393	RNF146	Q9NTX7	359 aa		9.37	□□□□□ -0.91
NVL-223	ENST00000496393	NYAP2	Q9P242	653 aa		9.37	□□□□□ -0.91
NVL-223	ENST00000496393	SCN5A	Q14524	2016 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	EPOP	A6NHQ4	379 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	CA3	P07451	260 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	CYP2C9	P11712	490 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	ATP2A2	P16615	1042 aa	Known RBP	9.36	□□□□□ -0.91
NVL-223	ENST00000496393	SMPD1	P17405	629 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	ATP5J	P18859	108 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	SNAP25	P60880	206 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	IK	Q13123	557 aa	Predicted RBP	9.36	□□□□□ -0.91
NVL-223	ENST00000496393	UBE3C	Q15386	1083 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	SLFN13	Q68D06	897 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	PLPP6	Q8IY26	295 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	FAM133A	Q8N9E0	248 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	SLC43A3	Q8NBI5	491 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	CHST13	Q8NET6	341 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	VWCE	Q96DN2	955 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	AGBL1	Q96MI9	1066 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	C1QTNF1	Q9BXJ1	281 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	ACAD9	Q9H845	621 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	TRMT13	Q9NUP7	481 aa	Known RBP	9.36	□□□□□ -0.91
NVL-223	ENST00000496393	FBXO40	Q9UH90	709 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	FEM1B	Q9UK73	627 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	GNE	Q9Y223	722 aa	Known RBP	9.36	□□□□□ -0.91
NVL-223	ENST00000496393	XIRP2	A4UGR9	3374 aa		9.36	□□□□□ -0.91
NVL-223	ENST00000496393	IGKV6D-41	A0A0C4DH26	115 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	FAM86C2P	A6NEL3	165 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	TMEM232	C9JQI7	657 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	RBAK-RBAKDN	I3L0D1	243 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	GTPBP6	O43824	516 aa	Predicted RBP	9.35	□□□□□ -0.91
NVL-223	ENST00000496393	SMARCA5	O60264	1052 aa	Predicted RBP	9.35	□□□□□ -0.91
NVL-223	ENST00000496393	ARHGEF15	O94989	841 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	ALAS1	P13196	640 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	TDO2	P48775	406 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	RASGRP2	Q7LDG7	609 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	SPRED2	Q7Z698	418 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	SIRT2	Q8IXJ6	389 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	ARNTL2	Q8WYA1	636 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	PURB	Q96QR8	312 aa	Known RBP	9.35	□□□□□ -0.91
NVL-223	ENST00000496393	STRBP	Q96SI9	672 aa	Known RBP	9.35	□□□□□ -0.91
NVL-223	ENST00000496393	LRFN3	Q9BTN0	628 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	9.35	□□□□□ -0.91
NVL-223	ENST00000496393	HCST	Q9UBK5	93 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	MTMR7	Q9Y216	660 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	COG6	Q9Y2V7	657 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	PCDHA11	Q9Y5I1	949 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	MTCH2	Q9Y6C9	303 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	COL4A4	P53420	1690 aa	Predicted RBP	9.35	□□□□□ -0.91
NVL-223	ENST00000496393	LCT	P09848	1927 aa		9.35	□□□□□ -0.91
NVL-223	ENST00000496393	GSG1L2	A8MUP6	293 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	CCER2	I3L3R5	266 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	ERC2	O15083	957 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	HR	O43593	1189 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	ZEB2	O60315	1214 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	HMMR	O75330	724 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	CABYR	O75952	493 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	BMP3	P12645	472 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	OAZ1	P54368	228 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	NKX3-2	P78367	333 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	FOXK1	P85037	733 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	AAK1	Q2M2I8	961 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	SBK1	Q52WX2	424 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	MUM1L1	Q5H9M0	696 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	FAM47C	Q5HY64	1035 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	TMEM67	Q5HYA8	995 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	TSHZ3	Q63HK5	1081 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	ZSCAN25	Q6NSZ9	544 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	9.34	□□□□□ -0.91
NVL-223	ENST00000496393	RPUSD2	Q8IZ73	545 aa	Known RBP	9.34	□□□□□ -0.91
NVL-223	ENST00000496393	ZNF444	Q8N0Y2	327 aa	Predicted RBP	9.34	□□□□□ -0.91
NVL-223	ENST00000496393	TRERF1	Q96PN7	1200 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	9.34	□□□□□ -0.91
NVL-223	ENST00000496393	MTMR4	Q9NYA4	1195 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	HCN4	Q9Y3Q4	1203 aa		9.34	□□□□□ -0.91
NVL-223	ENST00000496393	ZNF536	O15090	1300 aa		9.33	□□□□□ -0.92
NVL-223	ENST00000496393	TNKS	O95271	1327 aa		9.33	□□□□□ -0.92
NVL-223	ENST00000496393	ASB14	A6NK59	587 aa		9.33	□□□□□ -0.92
NVL-223	ENST00000496393		M0R2C6	588 aa		9.33	□□□□□ -0.92
NVL-223	ENST00000496393	GPAA1	O43292	621 aa		9.33	□□□□□ -0.92
NVL-223	ENST00000496393	RAB11FIP3	O75154	756 aa		9.33	□□□□□ -0.92
NVL-223	ENST00000496393	TTLL1	O95922	423 aa		9.33	□□□□□ -0.92
NVL-223	ENST00000496393	APP	P05067	770 aa		9.33	□□□□□ -0.92
NVL-223	ENST00000496393	MYL3	P08590	195 aa		9.33	□□□□□ -0.92
NVL-223	ENST00000496393	STAT2	P52630	851 aa		9.33	□□□□□ -0.92
NVL-223	ENST00000496393	CHMP4BP1	P59074	171 aa		9.33	□□□□□ -0.92
NVL-223	ENST00000496393	HNRNPU	Q00839	825 aa	Known RBP eCLIP	9.33	□□□□□ -0.92
NVL-223	ENST00000496393	DSG2	Q14126	1118 aa		9.33	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms