RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	GRIN3A	Q8TCU5	1115 aa		5.5	□□□□□ -1.53
VPS52-222	ENST00000495981	APPBP2	Q92624	585 aa		5.5	□□□□□ -1.53
VPS52-222	ENST00000495981	DPF3	Q92784	378 aa		5.5	□□□□□ -1.53
VPS52-222	ENST00000495981	JARID2	Q92833	1246 aa	Predicted RBP	5.5	□□□□□ -1.53
VPS52-222	ENST00000495981	BHMT	Q93088	406 aa		5.5	□□□□□ -1.53
VPS52-222	ENST00000495981	ZFP42	Q96MM3	310 aa		5.5	□□□□□ -1.53
VPS52-222	ENST00000495981	POP1	Q99575	1024 aa	Known RBP	5.5	□□□□□ -1.53
VPS52-222	ENST00000495981	MIR1-1HG	Q9H1L0	117 aa		5.5	□□□□□ -1.53
VPS52-222	ENST00000495981	EFCC1	Q9HA90	598 aa		5.5	□□□□□ -1.53
VPS52-222	ENST00000495981	FZD1	Q9UP38	647 aa		5.5	□□□□□ -1.53
VPS52-222	ENST00000495981	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	5.5	□□□□□ -1.53
VPS52-222	ENST00000495981	PRKAB1	Q9Y478	270 aa		5.5	□□□□□ -1.53
VPS52-222	ENST00000495981	PAPPA2	Q9BXP8	1791 aa		5.5	□□□□□ -1.53
VPS52-222	ENST00000495981	ABCC4	O15439	1325 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	CDHR2	Q9BYE9	1310 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	UPK3BL1	B0FP48	263 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	UPK3BL2	E5RIL1	263 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981		H7C1D1	291 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	GJB6	O95452	261 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	PARN	O95453	639 aa	Known RBP	5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	B3GALT4	O96024	378 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	IBSP	P21815	317 aa	Predicted RBP	5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	GPT	P24298	496 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	GYS2	P54840	703 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	CASP7	P55210	303 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	CHMP4BP1	P59074	171 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	ANAPC15	P60006	121 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	KIAA2012	Q0VF49	1180 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	DBN1	Q16643	649 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	CWF19L2	Q2TBE0	894 aa	Known RBP	5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	SUSD4	Q5VX71	490 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	GK5	Q6ZS86	529 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	VN1R5	Q7Z5H4	357 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	ZNF34	Q8IZ26	560 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	OR6P1	Q8NGX9	317 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	ASAP3	Q8TDY4	903 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	RTF1	Q92541	710 aa	Known RBP	5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	DPF2	Q92785	391 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	DCPS	Q96C86	337 aa	Known RBP	5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	ABHD17A	Q96GS6	310 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	PNMA5	Q96PV4	448 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	FERD3L	Q96RJ6	166 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	EHMT1	Q9H9B1	1298 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	METTL14	Q9HCE5	456 aa	Known RBP	5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	MIS18A	Q9NYP9	233 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	MARK1	Q9P0L2	795 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	GPN3	Q9UHW5	284 aa	Predicted RBP	5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	R3HCC1	Q9Y3T6	440 aa	Known RBP	5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	PTCH2	Q9Y6C5	1203 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	RTL9	Q8NET4	1388 aa		5.49	□□□□□ -1.53
VPS52-222	ENST00000495981	ARAP2	Q8WZ64	1704 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	MYH3	P11055	1940 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981		B2RBV5	119 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	LCE2B	O14633	110 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	NME2	P22392	152 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	MCM4	P33991	863 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	PLA2G5	P39877	138 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	ZNF165	P49910	485 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	ZNF252P-AS1	Q0IIN9	211 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	SCARF1	Q14162	830 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	TNIP1	Q15025	636 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	TAF7	Q15545	349 aa	Predicted RBP	5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	KIF4B	Q2VIQ3	1234 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	PLEKHG6	Q3KR16	790 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	C2orf27A	Q580R0	203 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	ANGEL2	Q5VTE6	544 aa	Known RBP	5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	MRM1	Q6IN84	353 aa	Known RBP	5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	KIF6	Q6ZMV9	814 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	RUFY4	Q6ZNE9	571 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	HFE2	Q6ZVN8	426 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	SPATC1	Q76KD6	591 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	PDZD3	Q86UT5	571 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	HOMER1	Q86YM7	354 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	GUCD1	Q96NT3	240 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	CRAMP1	Q96RY5	1269 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	PTPN18	Q99952	460 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	NYX	Q9GZU5	481 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	NUCKS1	Q9H1E3	243 aa	Known RBP	5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	CLEC4M	Q9H2X3	399 aa	Predicted RBP	5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	SOX13	Q9UN79	622 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	CYP8B1	Q9UNU6	501 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	NUDC	Q9Y266	331 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	ATP6V0A2	Q9Y487	856 aa		5.48	□□□□□ -1.53
VPS52-222	ENST00000495981	SLC35F4	A4IF30	521 aa		5.47	□□□□□ -1.53
VPS52-222	ENST00000495981	ATE1	O95260	518 aa		5.47	□□□□□ -1.53
VPS52-222	ENST00000495981	VIL1	P09327	827 aa	Known RBP	5.47	□□□□□ -1.53
VPS52-222	ENST00000495981	MYL6B	P14649	208 aa		5.47	□□□□□ -1.53
VPS52-222	ENST00000495981	MASP1	P48740	699 aa		5.47	□□□□□ -1.53
VPS52-222	ENST00000495981	CDK8	P49336	464 aa		5.47	□□□□□ -1.53
VPS52-222	ENST00000495981	PCDH1	Q08174	1060 aa		5.47	□□□□□ -1.53
VPS52-222	ENST00000495981	CRHR2	Q13324	411 aa		5.47	□□□□□ -1.53
VPS52-222	ENST00000495981	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	5.47	□□□□□ -1.53
VPS52-222	ENST00000495981	SLC4A8	Q2Y0W8	1093 aa		5.47	□□□□□ -1.53
VPS52-222	ENST00000495981	ARSH	Q5FYA8	562 aa		5.47	□□□□□ -1.53
VPS52-222	ENST00000495981	FBXW10	Q5XX13	1052 aa		5.47	□□□□□ -1.53
VPS52-222	ENST00000495981	LARP1B	Q659C4	914 aa	Known RBP	5.47	□□□□□ -1.53
VPS52-222	ENST00000495981	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	5.47	□□□□□ -1.53
VPS52-222	ENST00000495981	C16orf86	Q6ZW13	317 aa		5.47	□□□□□ -1.53
VPS52-222	ENST00000495981	NOL8	Q76FK4	1167 aa	Known RBP	5.47	□□□□□ -1.53
VPS52-222	ENST00000495981	SULF2	Q8IWU5	870 aa		5.47	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms