RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 MTFR1Q15390 333 aa23.15■■□□□ 1.3
LMO4-204ENST00000495705 CPLX2Q6PUV4 134 aaKnown RBP23.15■■□□□ 1.3
LMO4-204ENST00000495705 ZNF713Q8N859 430 aaPredicted RBP23.15■■□□□ 1.3
LMO4-204ENST00000495705 FGD4Q96M96 766 aa23.15■■□□□ 1.3
LMO4-204ENST00000495705 LARP6Q9BRS8 491 aaKnown RBP23.15■■□□□ 1.3
LMO4-204ENST00000495705 HMX1Q9NP08 348 aaPredicted RBP23.15■■□□□ 1.3
LMO4-204ENST00000495705 NRBP1Q9UHY1 535 aa23.15■■□□□ 1.3
LMO4-204ENST00000495705 MCM3APO60318 1980 aa23.14■■□□□ 1.3
LMO4-204ENST00000495705 CPLX1O14810 134 aa23.14■■□□□ 1.29
LMO4-204ENST00000495705 MYCP01106 439 aaPredicted RBP23.14■■□□□ 1.29
LMO4-204ENST00000495705 IFNAR1P17181 557 aa23.14■■□□□ 1.29
LMO4-204ENST00000495705 CALML3P27482 149 aa23.14■■□□□ 1.29
LMO4-204ENST00000495705 RNF208Q9H0X6 261 aa23.14■■□□□ 1.29
LMO4-204ENST00000495705 UNC93B1Q9H1C4 597 aa23.14■■□□□ 1.29
LMO4-204ENST00000495705 SLKQ9H2G2 1235 aaPredicted RBP23.14■■□□□ 1.29
LMO4-204ENST00000495705 NCOA5Q9HCD5 579 aaKnown RBP23.14■■□□□ 1.29
LMO4-204ENST00000495705 TPCN1Q9ULQ1 816 aa23.14■■□□□ 1.29
LMO4-204ENST00000495705 V9GY48 417 aaPredicted RBP23.14■■□□□ 1.29
LMO4-204ENST00000495705 hCG_1642624A0A1W2PR95 340 aa23.13■■□□□ 1.29
LMO4-204ENST00000495705 SOWAHBA6NEL2 793 aa23.13■■□□□ 1.29
LMO4-204ENST00000495705 ASB14A6NK59 587 aa23.13■■□□□ 1.29
LMO4-204ENST00000495705 OPLAHO14841 1288 aa23.13■■□□□ 1.29
LMO4-204ENST00000495705 CFBP00751 764 aa23.13■■□□□ 1.29
LMO4-204ENST00000495705 STK3Q13188 491 aa23.13■■□□□ 1.29
LMO4-204ENST00000495705 NTRK3Q16288 839 aa23.13■■□□□ 1.29
LMO4-204ENST00000495705 DNERQ8NFT8 737 aa23.13■■□□□ 1.29
LMO4-204ENST00000495705 RNF26Q9BY78 433 aaPredicted RBP23.13■■□□□ 1.29
LMO4-204ENST00000495705 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.13■■□□□ 1.293e-6■■■□□ 15.6
LMO4-204ENST00000495705 PRPF3O43395 683 aaKnown RBP23.12■■□□□ 1.29
LMO4-204ENST00000495705 PFKFB2O60825 505 aa23.12■■□□□ 1.29
LMO4-204ENST00000495705 CYBAP13498 195 aa23.12■■□□□ 1.29
LMO4-204ENST00000495705 HSD17B4P51659 736 aa23.12■■□□□ 1.29
LMO4-204ENST00000495705 AKAP17AQ02040 695 aaKnown RBP23.12■■□□□ 1.29
LMO4-204ENST00000495705 PPP1R18Q6NYC8 613 aa23.12■■□□□ 1.29
LMO4-204ENST00000495705 ARMCX2Q7L311 632 aa23.12■■□□□ 1.29
LMO4-204ENST00000495705 HEATR3Q7Z4Q2 680 aa23.12■■□□□ 1.29
LMO4-204ENST00000495705 SYTL5Q8TDW5 730 aaPredicted RBP23.12■■□□□ 1.29
LMO4-204ENST00000495705 MPHOSPH6Q99547 160 aaKnown RBP23.12■■□□□ 1.29
LMO4-204ENST00000495705 PAK6Q9NQU5 681 aaPredicted RBP23.12■■□□□ 1.29
LMO4-204ENST00000495705 CNPY2Q9Y2B0 182 aa23.12■■□□□ 1.29
LMO4-204ENST00000495705 GCOM1H8Y6P7 765 aaPredicted RBP23.11■■□□□ 1.29
LMO4-204ENST00000495705 GJB1P08034 283 aa23.11■■□□□ 1.29
LMO4-204ENST00000495705 POLR2MP0CAP2 368 aa23.11■■□□□ 1.29
LMO4-204ENST00000495705 ALDH5A1P51649 535 aaPredicted RBP23.11■■□□□ 1.29
LMO4-204ENST00000495705 NOL8Q76FK4 1167 aaKnown RBP23.11■■□□□ 1.29
LMO4-204ENST00000495705 TRIM22Q8IYM9 498 aa23.11■■□□□ 1.29
LMO4-204ENST00000495705 TBC1D5Q92609 795 aa23.11■■□□□ 1.29
LMO4-204ENST00000495705 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.11■■□□□ 1.29
LMO4-204ENST00000495705 LRRC37A2A6NM11 1700 aa23.11■■□□□ 1.29
LMO4-204ENST00000495705 ASTN1O14525 1302 aa23.1■■□□□ 1.29
LMO4-204ENST00000495705 B4DLN1 442 aa23.1■■□□□ 1.29
LMO4-204ENST00000495705 CDKL5O76039 1030 aa23.1■■□□□ 1.29
LMO4-204ENST00000495705 SCG2P13521 617 aa23.1■■□□□ 1.29
LMO4-204ENST00000495705 MRPL12P52815 198 aaKnown RBP23.1■■□□□ 1.29
LMO4-204ENST00000495705 SCRN1Q12765 414 aa23.1■■□□□ 1.29
LMO4-204ENST00000495705 PFKFB3Q16875 520 aaPredicted RBP23.1■■□□□ 1.29
LMO4-204ENST00000495705 WWC2Q6AWC2 1192 aa23.1■■□□□ 1.29
LMO4-204ENST00000495705 GPKOWQ92917 476 aaPredicted RBP eCLIP23.1■■□□□ 1.29
LMO4-204ENST00000495705 PHKBQ93100 1093 aa23.1■■□□□ 1.29
LMO4-204ENST00000495705 ST18O60284 1047 aa23.09■■□□□ 1.29
LMO4-204ENST00000495705 MSCO60682 206 aa23.09■■□□□ 1.29
LMO4-204ENST00000495705 CAPN2P17655 700 aa23.09■■□□□ 1.29
LMO4-204ENST00000495705 CCND3P30281 292 aaPredicted RBP23.09■■□□□ 1.29
LMO4-204ENST00000495705 TEX2Q8IWB9 1127 aa23.09■■□□□ 1.29
LMO4-204ENST00000495705 MORC4Q8TE76 937 aa23.09■■□□□ 1.29
LMO4-204ENST00000495705 CUL5Q93034 780 aa23.09■■□□□ 1.29
LMO4-204ENST00000495705 PURBQ96QR8 312 aaKnown RBP23.09■■□□□ 1.29
LMO4-204ENST00000495705 SLC26A6Q9BXS9 759 aa23.09■■□□□ 1.29
LMO4-204ENST00000495705 ABHD16BQ9H3Z7 469 aa23.09■■□□□ 1.29
LMO4-204ENST00000495705 BARHL2Q9NY43 387 aa23.09■■□□□ 1.29
LMO4-204ENST00000495705 LIMCH1Q9UPQ0 1083 aa23.09■■□□□ 1.29
LMO4-204ENST00000495705 FRMPD3Q5JV73 1810 aa23.08■■□□□ 1.29
LMO4-204ENST00000495705 SNAI1O95863 264 aaPredicted RBP23.08■■□□□ 1.29
LMO4-204ENST00000495705 NAPAP54920 295 aa23.08■■□□□ 1.29
LMO4-204ENST00000495705 SSRP1Q08945 709 aaKnown RBP23.08■■□□□ 1.29
LMO4-204ENST00000495705 ME3Q16798 604 aa23.08■■□□□ 1.29
LMO4-204ENST00000495705 TRPV1Q8NER1 839 aa23.08■■□□□ 1.29
LMO4-204ENST00000495705 NSUN6Q8TEA1 469 aaKnown RBP23.08■■□□□ 1.29
LMO4-204ENST00000495705 GTF3C6Q969F1 213 aa23.08■■□□□ 1.29
LMO4-204ENST00000495705 COL20A1Q9P218 1284 aa23.08■■□□□ 1.29
LMO4-204ENST00000495705 STXBP3O00186 592 aa23.07■■□□□ 1.28
LMO4-204ENST00000495705 PIK3CDO00329 1044 aa23.07■■□□□ 1.28
LMO4-204ENST00000495705 SEPT4O43236 478 aa23.07■■□□□ 1.28
LMO4-204ENST00000495705 CNGA1P29973 690 aa23.07■■□□□ 1.28
LMO4-204ENST00000495705 HOXA13P31271 388 aaPredicted RBP23.07■■□□□ 1.28
LMO4-204ENST00000495705 GJA8P48165 433 aa23.07■■□□□ 1.28
LMO4-204ENST00000495705 SOX10P56693 466 aa23.07■■□□□ 1.28
LMO4-204ENST00000495705 PKN1Q16512 942 aa23.07■■□□□ 1.28
LMO4-204ENST00000495705 U2AF1L4Q8WU68 220 aaKnown RBP23.07■■□□□ 1.28
LMO4-204ENST00000495705 CCDC12Q8WUD4 166 aaPredicted RBP23.07■■□□□ 1.28
LMO4-204ENST00000495705 DEFB118Q96PH6 123 aa23.07■■□□□ 1.28
LMO4-204ENST00000495705 TAAR1Q96RJ0 339 aa23.07■■□□□ 1.28
LMO4-204ENST00000495705 RMDN3Q96TC7 470 aa23.07■■□□□ 1.28
LMO4-204ENST00000495705 PSTPIP2Q9H939 334 aa23.07■■□□□ 1.28
LMO4-204ENST00000495705 DEXIO95424 95 aa23.06■■□□□ 1.28
LMO4-204ENST00000495705 LARGE1O95461 756 aa23.06■■□□□ 1.28
LMO4-204ENST00000495705 SGPL1O95470 568 aa23.06■■□□□ 1.28
LMO4-204ENST00000495705 ZNF865P0CJ78 1059 aaPredicted RBP23.06■■□□□ 1.28
LMO4-204ENST00000495705 EDNRBP24530 442 aa23.06■■□□□ 1.28
LMO4-204ENST00000495705 ACVR2BQ13705 512 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms