RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 UBXN2AP68543 259 aa12.85□□□□□ -0.35
APTX-230ENST00000494649 ANKRD1Q15327 319 aa12.85□□□□□ -0.35
APTX-230ENST00000494649 NTRK3Q16288 839 aa12.85□□□□□ -0.35
APTX-230ENST00000494649 TYW1BQ6NUM6 668 aa12.85□□□□□ -0.35
APTX-230ENST00000494649 FCHSD1Q86WN1 690 aa12.85□□□□□ -0.35
APTX-230ENST00000494649 ZFP91Q96JP5 570 aaPredicted RBP12.85□□□□□ -0.35
APTX-230ENST00000494649 SLC5A4Q9NY91 659 aa12.85□□□□□ -0.35
APTX-230ENST00000494649 PFASO15067 1338 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 CCL5P13501 91 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 RCAN1P53805 252 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 USP17L6PQ6QN14 398 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 FAM133AQ8N9E0 248 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 AIFM3Q96NN9 605 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 PLXNA1Q9UIW2 1896 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 POTEFA5A3E0 1075 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 SMARCA1P28370 1054 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 FOSBP53539 338 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 NAPAP54920 295 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 RABEP1Q15276 862 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 UBE2SQ16763 222 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 MFSD14CQ5VZR4 134 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 TRPV1Q8NER1 839 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 LENG1Q96BZ8 264 aaPredicted RBP12.84□□□□□ -0.35
APTX-230ENST00000494649 ARMC5Q96C12 935 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 TAAR1Q96RJ0 339 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 TINF2Q9BSI4 451 aa12.84□□□□□ -0.35
APTX-230ENST00000494649 NID2Q14112 1375 aa12.83□□□□□ -0.36
APTX-230ENST00000494649 ZNF236Q9UL36 1845 aa12.83□□□□□ -0.36
APTX-230ENST00000494649 PFKFB2O60825 505 aa12.83□□□□□ -0.36
APTX-230ENST00000494649 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
APTX-230ENST00000494649 PTGS1P23219 599 aa12.83□□□□□ -0.36
APTX-230ENST00000494649 AKAP17AQ02040 695 aaKnown RBP12.83□□□□□ -0.36
APTX-230ENST00000494649 ST3GAL1Q11201 340 aa12.83□□□□□ -0.36
APTX-230ENST00000494649 PKN1Q16512 942 aa12.83□□□□□ -0.36
APTX-230ENST00000494649 ARMCX2Q7L311 632 aa12.83□□□□□ -0.36
APTX-230ENST00000494649 CCDC83Q8IWF9 413 aa12.83□□□□□ -0.36
APTX-230ENST00000494649 SYTL5Q8TDW5 730 aaPredicted RBP12.83□□□□□ -0.36
APTX-230ENST00000494649 ALDH8A1Q9H2A2 487 aaPredicted RBP12.83□□□□□ -0.36
APTX-230ENST00000494649 ZHX1Q9UKY1 873 aaPredicted RBP12.83□□□□□ -0.36
APTX-230ENST00000494649 LCTP09848 1927 aa12.83□□□□□ -0.36
APTX-230ENST00000494649 MCM3APO60318 1980 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 ADAMTS3O15072 1205 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 CTDNEP1O95476 244 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 SNAI1O95863 264 aaPredicted RBP12.82□□□□□ -0.36
APTX-230ENST00000494649 EIF2AK2P19525 551 aaKnown RBP12.82□□□□□ -0.36
APTX-230ENST00000494649 MCF2L2Q86YR7 1114 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 PGBD1Q96JS3 809 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 DEFB118Q96PH6 123 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 GJB4Q9NTQ9 266 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 VPS54Q9P1Q0 977 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 LIMCH1Q9UPQ0 1083 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 STXBP3O00186 592 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 JAK2O60674 1132 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 SCG2P13521 617 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 IFNAR1P17181 557 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 ALDH5A1P51649 535 aaPredicted RBP12.82□□□□□ -0.36
APTX-230ENST00000494649 SSRP1Q08945 709 aaKnown RBP12.82□□□□□ -0.36
APTX-230ENST00000494649 PPP2R5BQ15173 497 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 OLFML2BQ68BL8 750 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 FBXO16Q8IX29 292 aaPredicted RBP12.82□□□□□ -0.36
APTX-230ENST00000494649 GTF3C6Q969F1 213 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 SHISA4Q96DD7 197 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 HMX1Q9NP08 348 aaPredicted RBP12.82□□□□□ -0.36
APTX-230ENST00000494649 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.82□□□□□ -0.36
APTX-230ENST00000494649 PNMA2Q9UL42 364 aa12.82□□□□□ -0.36
APTX-230ENST00000494649 KIAA0100Q14667 2235 aaKnown RBP12.81□□□□□ -0.36
APTX-230ENST00000494649 GCOM1H8Y6P7 765 aaPredicted RBP12.81□□□□□ -0.36
APTX-230ENST00000494649 PRPF3O43395 683 aaKnown RBP12.81□□□□□ -0.36
APTX-230ENST00000494649 ST18O60284 1047 aa12.81□□□□□ -0.36
APTX-230ENST00000494649 POLR2MP0CAP2 368 aa12.81□□□□□ -0.36
APTX-230ENST00000494649 PFKFB3Q16875 520 aaPredicted RBP12.81□□□□□ -0.36
APTX-230ENST00000494649 TRIM22Q8IYM9 498 aa12.81□□□□□ -0.36
APTX-230ENST00000494649 SMARCC2Q8TAQ2 1214 aa12.81□□□□□ -0.36
APTX-230ENST00000494649 RMDN3Q96TC7 470 aa12.81□□□□□ -0.36
APTX-230ENST00000494649 TMEM106CQ9BVX2 250 aa12.81□□□□□ -0.36
APTX-230ENST00000494649 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.81□□□□□ -0.36
APTX-230ENST00000494649 PSTPIP2Q9H939 334 aa12.81□□□□□ -0.36
APTX-230ENST00000494649 CNPY2Q9Y2B0 182 aa12.81□□□□□ -0.36
APTX-230ENST00000494649 RPTORQ8N122 1335 aa12.81□□□□□ -0.36
APTX-230ENST00000494649 CYBAP13498 195 aa12.81□□□□□ -0.36
APTX-230ENST00000494649 EN2P19622 333 aaPredicted RBP12.81□□□□□ -0.36
APTX-230ENST00000494649 HSD17B4P51659 736 aa12.81□□□□□ -0.36
APTX-230ENST00000494649 TMEM63BQ5T3F8 832 aa12.81□□□□□ -0.36
APTX-230ENST00000494649 MAP3K21Q5TCX8 1036 aa12.81□□□□□ -0.36
APTX-230ENST00000494649 ARHGEF16Q5VV41 709 aa12.81□□□□□ -0.36
APTX-230ENST00000494649 CPLX2Q6PUV4 134 aaKnown RBP12.81□□□□□ -0.36
APTX-230ENST00000494649 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.81□□□□□ -0.36
APTX-230ENST00000494649 RNF26Q9BY78 433 aaPredicted RBP12.81□□□□□ -0.36
APTX-230ENST00000494649 PDGFCQ9NRA1 345 aa12.81□□□□□ -0.36
APTX-230ENST00000494649 BARHL2Q9NY43 387 aa12.81□□□□□ -0.36
APTX-230ENST00000494649 DIS3Q9Y2L1 958 aaKnown RBP12.81□□□□□ -0.36
APTX-230ENST00000494649 SMCO2A6NFE2 343 aa12.8□□□□□ -0.36
APTX-230ENST00000494649 MEIS2O14770 477 aa12.8□□□□□ -0.36
APTX-230ENST00000494649 MYCLP12524 364 aaPredicted RBP12.8□□□□□ -0.36
APTX-230ENST00000494649 TRMT44Q8IYL2 757 aaKnown RBP12.8□□□□□ -0.36
APTX-230ENST00000494649 IL31RAQ8NI17 732 aa12.8□□□□□ -0.36
APTX-230ENST00000494649 TMEM260Q9NX78 707 aa12.8□□□□□ -0.36
APTX-230ENST00000494649 ADD3Q9UEY8 706 aaKnown RBP12.8□□□□□ -0.36
APTX-230ENST00000494649 DNAH12Q6ZR08 3092 aa12.8□□□□□ -0.36
APTX-230ENST00000494649 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms