RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 MAGEA10P43363 369 aaPredicted RBP15.35■□□□□ 0.05
ERCC3-209ENST00000494464 ACLYP53396 1101 aa15.35■□□□□ 0.05
ERCC3-209ENST00000494464 TNFAIP2Q03169 654 aa15.35■□□□□ 0.05
ERCC3-209ENST00000494464 TROAPQ12815 778 aa15.35■□□□□ 0.05
ERCC3-209ENST00000494464 TMEM67Q5HYA8 995 aa15.35■□□□□ 0.05
ERCC3-209ENST00000494464 TAPT1Q6NXT6 567 aa15.35■□□□□ 0.05
ERCC3-209ENST00000494464 CASC1Q6TDU7 716 aa15.35■□□□□ 0.05
ERCC3-209ENST00000494464 FBXO11Q86XK2 927 aa15.35■□□□□ 0.05
ERCC3-209ENST00000494464 FBXO16Q8IX29 292 aaPredicted RBP15.35■□□□□ 0.05
ERCC3-209ENST00000494464 PCSK9Q8NBP7 692 aaKnown RBP15.35■□□□□ 0.05
ERCC3-209ENST00000494464 IGDCC4Q8TDY8 1250 aa15.35■□□□□ 0.05
ERCC3-209ENST00000494464 NUP133Q8WUM0 1156 aa15.35■□□□□ 0.05
ERCC3-209ENST00000494464 MPHOSPH6Q99547 160 aaKnown RBP15.35■□□□□ 0.05
ERCC3-209ENST00000494464 GNEQ9Y223 722 aaKnown RBP15.35■□□□□ 0.05
ERCC3-209ENST00000494464 ATP11BQ9Y2G3 1177 aa15.35■□□□□ 0.05
ERCC3-209ENST00000494464 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.34■□□□□ 0.05
ERCC3-209ENST00000494464 CTAGE5O15320 804 aa15.34■□□□□ 0.05
ERCC3-209ENST00000494464 TRIM60Q495X7 471 aa15.34■□□□□ 0.05
ERCC3-209ENST00000494464 CREB3L3Q68CJ9 461 aa15.34■□□□□ 0.05
ERCC3-209ENST00000494464 CHST3Q7LGC8 479 aa15.34■□□□□ 0.05
ERCC3-209ENST00000494464 TLK2Q86UE8 772 aa15.34■□□□□ 0.05
ERCC3-209ENST00000494464 MAP3K14Q99558 947 aa15.34■□□□□ 0.05
ERCC3-209ENST00000494464 SENP2Q9HC62 589 aa15.34■□□□□ 0.05
ERCC3-209ENST00000494464 MRPL11Q9Y3B7 192 aaKnown RBP15.34■□□□□ 0.05
ERCC3-209ENST00000494464 DDX49Q9Y6V7 483 aaKnown RBP15.34■□□□□ 0.05
ERCC3-209ENST00000494464 ELP1O95163 1332 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 ZBTB5O15062 677 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 DDAH1O94760 285 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 SEC24BO95487 1268 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 MCM5P33992 734 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 GHRHRQ02643 423 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 KCNA10Q16322 511 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 IQSEC1Q6DN90 963 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 CATIPQ7Z7H3 387 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 MCF2L2Q86YR7 1114 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 TMEM87BQ96K49 555 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 TBC1D32Q96NH3 1257 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 AMNQ9BXJ7 453 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 RIOX1Q9H6W3 641 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 LY9Q9HBG7 655 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 STARD7Q9NQZ5 370 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 PDLIM7Q9NR12 457 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 PRKAG2Q9UGJ0 569 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 Q9Y3F1 56 aa15.33■□□□□ 0.04
ERCC3-209ENST00000494464 RBM47A0AV96 593 aaKnown RBP15.32■□□□□ 0.04
ERCC3-209ENST00000494464 B4DLN1 442 aa15.32■□□□□ 0.04
ERCC3-209ENST00000494464 PRC1O43663 620 aa15.32■□□□□ 0.04
ERCC3-209ENST00000494464 ASGR1P07306 291 aa15.32■□□□□ 0.04
ERCC3-209ENST00000494464 SMPD1P17405 629 aa15.32■□□□□ 0.04
ERCC3-209ENST00000494464 MRPL12P52815 198 aaKnown RBP15.32■□□□□ 0.04
ERCC3-209ENST00000494464 SLC35G1Q2M3R5 365 aa15.32■□□□□ 0.04
ERCC3-209ENST00000494464 RNF20Q5VTR2 975 aa15.32■□□□□ 0.04
ERCC3-209ENST00000494464 EEPD1Q7L9B9 569 aa15.32■□□□□ 0.04
ERCC3-209ENST00000494464 GLT1D1Q96MS3 346 aa15.32■□□□□ 0.04
ERCC3-209ENST00000494464 VAT1LQ9HCJ6 419 aa15.32■□□□□ 0.04
ERCC3-209ENST00000494464 PDGFCQ9NRA1 345 aa15.32■□□□□ 0.04
ERCC3-209ENST00000494464 LAMA3Q16787 3333 aa15.31■□□□□ 0.04
ERCC3-209ENST00000494464 MROH7Q68CQ1 1323 aa15.31■□□□□ 0.04
ERCC3-209ENST00000494464 KIAA1217Q5T5P2 1943 aa15.31■□□□□ 0.04
ERCC3-209ENST00000494464 SH2B2O14492 632 aaPredicted RBP15.31■□□□□ 0.04
ERCC3-209ENST00000494464 PPP1R11O60927 126 aaPredicted RBP15.31■□□□□ 0.04
ERCC3-209ENST00000494464 IRX5P78411 483 aaPredicted RBP15.31■□□□□ 0.04
ERCC3-209ENST00000494464 PDE4DQ08499 809 aa15.31■□□□□ 0.04
ERCC3-209ENST00000494464 TRAF1Q13077 416 aa15.31■□□□□ 0.04
ERCC3-209ENST00000494464 DUSP28Q4G0W2 176 aa15.31■□□□□ 0.04
ERCC3-209ENST00000494464 GNASQ5JWF2 1037 aa15.31■□□□□ 0.04
ERCC3-209ENST00000494464 NOL8Q76FK4 1167 aaKnown RBP15.31■□□□□ 0.04
ERCC3-209ENST00000494464 ANKRD33Q7Z3H0 272 aa15.31■□□□□ 0.04
ERCC3-209ENST00000494464 ZNF654Q8IZM8 581 aa15.31■□□□□ 0.04
ERCC3-209ENST00000494464 SYTL5Q8TDW5 730 aaPredicted RBP15.31■□□□□ 0.04
ERCC3-209ENST00000494464 TOX2Q96NM4 488 aa15.31■□□□□ 0.04
ERCC3-209ENST00000494464 COL20A1Q9P218 1284 aa15.31■□□□□ 0.04
ERCC3-209ENST00000494464 OPLAHO14841 1288 aa15.3■□□□□ 0.04
ERCC3-209ENST00000494464 CYTH3O43739 400 aa15.3■□□□□ 0.04
ERCC3-209ENST00000494464 CLTBP09497 229 aa15.3■□□□□ 0.04
ERCC3-209ENST00000494464 KIF5BP33176 963 aa15.3■□□□□ 0.04
ERCC3-209ENST00000494464 LIFRP42702 1097 aa15.3■□□□□ 0.04
ERCC3-209ENST00000494464 HSD17B4P51659 736 aa15.3■□□□□ 0.04
ERCC3-209ENST00000494464 MDM2Q00987 491 aaPredicted RBP15.3■□□□□ 0.04
ERCC3-209ENST00000494464 TLE2Q04725 743 aa15.3■□□□□ 0.04
ERCC3-209ENST00000494464 FSCN1Q16658 493 aaKnown RBP15.3■□□□□ 0.04
ERCC3-209ENST00000494464 TDHQ8IZJ6 230 aa15.3■□□□□ 0.04
ERCC3-209ENST00000494464 TMTC2Q8N394 836 aa15.3■□□□□ 0.04
ERCC3-209ENST00000494464 SAMD3Q8N6K7 520 aa15.3■□□□□ 0.04
ERCC3-209ENST00000494464 SCFD2Q8WU76 684 aa15.3■□□□□ 0.04
ERCC3-209ENST00000494464 LBHD1Q9BQE6 289 aaPredicted RBP15.3■□□□□ 0.04
ERCC3-209ENST00000494464 SPZ1Q9BXG8 430 aa15.3■□□□□ 0.04
ERCC3-209ENST00000494464 UBE2OQ9C0C9 1292 aaKnown RBP15.3■□□□□ 0.04
ERCC3-209ENST00000494464 AP5M1Q9H0R1 490 aa15.3■□□□□ 0.04
ERCC3-209ENST00000494464 MAP3K20Q9NYL2 800 aaKnown RBP15.3■□□□□ 0.04
ERCC3-209ENST00000494464 A0A0U1RQG5 324 aaPredicted RBP15.29■□□□□ 0.04
ERCC3-209ENST00000494464 NKRFO15226 690 aaKnown RBP eCLIP15.29■□□□□ 0.04
ERCC3-209ENST00000494464 COL9A3Q14050 684 aaPredicted RBP15.29■□□□□ 0.04
ERCC3-209ENST00000494464 HOMER1Q86YM7 354 aa15.29■□□□□ 0.04
ERCC3-209ENST00000494464 CTCFLQ8NI51 663 aaPredicted RBP15.29■□□□□ 0.04
ERCC3-209ENST00000494464 NSUN6Q8TEA1 469 aaKnown RBP15.29■□□□□ 0.04
ERCC3-209ENST00000494464 TBC1D5Q92609 795 aa15.29■□□□□ 0.04
ERCC3-209ENST00000494464 PIGSQ96S52 555 aa15.29■□□□□ 0.04
ERCC3-209ENST00000494464 WDR11Q9BZH6 1224 aa15.29■□□□□ 0.04
ERCC3-209ENST00000494464 PRDM5Q9NQX1 630 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms