RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 CAMK4Q16566 473 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 INF2Q27J81 1249 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 LONRF3Q496Y0 759 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 KANK3Q6NY19 840 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 POTEBQ6S5H4 581 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 USP49Q70CQ1 688 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 FBXO11Q86XK2 927 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 PRPF38AQ8NAV1 312 aaKnown RBP7.73□□□□□ -1.17
MSH5-217ENST00000494458 TBCKQ8TEA7 893 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 PIBF1Q8WXW3 757 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 CUL5Q93034 780 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 AK8Q96MA6 479 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 BPIFA3Q9BQP9 254 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 PYM1Q9BRP8 204 aaKnown RBP7.73□□□□□ -1.17
MSH5-217ENST00000494458 TMEM60Q9H2L4 133 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 OCEL1Q9H607 264 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 GGA3Q9NZ52 723 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 PNMA2Q9UL42 364 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 MTMR7Q9Y216 660 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 AFG3L2Q9Y4W6 797 aa7.73□□□□□ -1.17
MSH5-217ENST00000494458 A0A087X0B3 334 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 ATP2A1O14983 1001 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 SLC26A4O43511 780 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 SLFN14P0C7P3 912 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 GCFC2P16383 781 aaKnown RBP7.72□□□□□ -1.17
MSH5-217ENST00000494458 NUBP1P53384 320 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 SEMA3FQ13275 785 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 IQCB1Q15051 598 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 CT47A1Q5JQC4 288 aaPredicted RBP7.72□□□□□ -1.17
MSH5-217ENST00000494458 FAM83BQ5T0W9 1011 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 DPY19L2Q6NUT2 758 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.72□□□□□ -1.17
MSH5-217ENST00000494458 ZNF280CQ8ND82 737 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 REPS2Q8NFH8 660 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 FAM200AQ8TCP9 573 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 HAS1Q92839 578 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 EPSTI1Q96J88 318 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 NAP1L4Q99733 375 aaKnown RBP7.72□□□□□ -1.17
MSH5-217ENST00000494458 SLC38A10Q9HBR0 1119 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 KCNMB3Q9NPA1 279 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 FAM13BQ9NYF5 915 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 MAP3K20Q9NYL2 800 aaKnown RBP7.72□□□□□ -1.17
MSH5-217ENST00000494458 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.72□□□□□ -1.17
MSH5-217ENST00000494458 BIN2Q9UBW5 565 aaPredicted RBP7.72□□□□□ -1.17
MSH5-217ENST00000494458 SCAF8Q9UPN6 1271 aaKnown RBP7.72□□□□□ -1.17
MSH5-217ENST00000494458 MYPNQ86TC9 1320 aa7.72□□□□□ -1.17
MSH5-217ENST00000494458 PHIPQ8WWQ0 1821 aa7.71□□□□□ -1.17
MSH5-217ENST00000494458 TBX3O15119 743 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 ICAM1P05362 532 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 LMOD1P29536 600 aaPredicted RBP7.71□□□□□ -1.18
MSH5-217ENST00000494458 MCM7P33993 719 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 SREBF1P36956 1147 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 HSD17B4P51659 736 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 OAZ1P54368 228 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 MAP3K9P80192 1104 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 Q4G0T1 1027 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 NAALADL2Q58DX5 795 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 HYIQ5T013 277 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 JAKMIP3Q5VZ66 844 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 PDXDC2PQ6P474 469 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 DTHD1Q6ZMT9 781 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 CKAP2LQ8IYA6 745 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 SPICE1Q8N0Z3 855 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 SYMPKQ92797 1274 aaKnown RBP7.71□□□□□ -1.18
MSH5-217ENST00000494458 LENG9Q96B70 501 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 MTRQ99707 1265 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 SDF4Q9BRK5 362 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 MMTAG2Q9BU76 263 aaKnown RBP7.71□□□□□ -1.18
MSH5-217ENST00000494458 AS3MTQ9HBK9 375 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 TMEM260Q9NX78 707 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 PPP1R9AQ9ULJ8 1098 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 ABCB11O95342 1321 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 ATAD5Q96QE3 1844 aa7.71□□□□□ -1.18
MSH5-217ENST00000494458 DOCK1Q14185 1865 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 WDR90Q96KV7 1748 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 VWA3AA6NCI4 1184 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 USP17L15C9J2P7 530 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 USP17L13C9JLJ4 530 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 USP17L11C9JVI0 530 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 USP17L18D6R9N7 530 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 USP17L22D6RA61 530 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 USP17L17D6RBQ6 530 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 USP17L19D6RCP7 530 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 USP17L20D6RJB6 530 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 POLR2DO15514 142 aaKnown RBP7.7□□□□□ -1.18
MSH5-217ENST00000494458 NEMFO60524 1076 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 MYL1P05976 194 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 OR52Z1P0C646 297 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 VCAM1P19320 739 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 ATP2B1P20020 1258 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 BMP6P22004 513 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 NLRP12P59046 1061 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 USP17L24Q0WX57 530 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 DPYDQ12882 1025 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 STX1AQ16623 288 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 UBE2SQ16763 222 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 SPECC1Q5M775 1068 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 LDLRAD1Q5T700 205 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 CNNM4Q6P4Q7 775 aa7.7□□□□□ -1.18
MSH5-217ENST00000494458 USP17L6PQ6QN14 398 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms