RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 MCM3APO60318 1980 aa10.26□□□□□ -0.77
ITGB1-217ENST00000494395 MKI67P46013 3256 aaKnown RBP10.25□□□□□ -0.77
ITGB1-217ENST00000494395 LRRC37A2A6NM11 1700 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 EPB41L2O43491 1005 aaKnown RBP10.25□□□□□ -0.77
ITGB1-217ENST00000494395 PRC1O43663 620 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 ICAM1P05362 532 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 GOLGA8HP0CJ92 632 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 FCER1AP12319 257 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 ZKSCAN1P17029 563 aaPredicted RBP10.25□□□□□ -0.77
ITGB1-217ENST00000494395 TAL1P17542 331 aaPredicted RBP10.25□□□□□ -0.77
ITGB1-217ENST00000494395 HSPA4P34932 840 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 UBXN2AP68543 259 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 CACNB2Q08289 660 aaPredicted RBP10.25□□□□□ -0.77
ITGB1-217ENST00000494395 TROAPQ12815 778 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 IKQ13123 557 aaPredicted RBP10.25□□□□□ -0.77
ITGB1-217ENST00000494395 SLC35G1Q2M3R5 365 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 ZNF792Q3KQV3 632 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 ASPRV1Q53RT3 343 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 OLFML2BQ68BL8 750 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 STAG2Q8N3U4 1231 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 CHST13Q8NET6 341 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 FGD4Q96M96 766 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 SLC4A5Q9BY07 1137 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 CPVLQ9H3G5 476 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 MAD2L2Q9UI95 211 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 RABGEF1Q9UJ41 708 aa10.25□□□□□ -0.77
ITGB1-217ENST00000494395 ISY1Q9ULR0 285 aaKnown RBP10.25□□□□□ -0.77
ITGB1-217ENST00000494395 BAZ2BQ9UIF8 2168 aaKnown RBP10.24□□□□□ -0.77
ITGB1-217ENST00000494395 PALM3A6NDB9 673 aaPredicted RBP10.24□□□□□ -0.77
ITGB1-217ENST00000494395 FAM205CA6NFA0 338 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 SH2B2O14492 632 aaPredicted RBP10.24□□□□□ -0.77
ITGB1-217ENST00000494395 REC8O95072 547 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 MYCP01106 439 aaPredicted RBP10.24□□□□□ -0.77
ITGB1-217ENST00000494395 GJB1P08034 283 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 MCM5P33992 734 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 GJA8P48165 433 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 CLK2P49760 499 aaKnown RBP10.24□□□□□ -0.77
ITGB1-217ENST00000494395 EXOSC10Q01780 885 aaKnown RBP10.24□□□□□ -0.77
ITGB1-217ENST00000494395 GRM4Q14833 912 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 WTAPQ15007 396 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 SART3Q15020 963 aaKnown RBP10.24□□□□□ -0.77
ITGB1-217ENST00000494395 TKFCQ3LXA3 575 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 MUM1L1Q5H9M0 696 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 TMEM67Q5HYA8 995 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 RNF20Q5VTR2 975 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 SPIRE2Q8WWL2 714 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 MTMR8Q96EF0 704 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 MAML3Q96JK9 1138 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 TMEM87BQ96K49 555 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 MMP19Q99542 508 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 UBA5Q9GZZ9 404 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 CWC22Q9HCG8 908 aaKnown RBP10.24□□□□□ -0.77
ITGB1-217ENST00000494395 BIN2Q9UBW5 565 aaPredicted RBP10.24□□□□□ -0.77
ITGB1-217ENST00000494395 FBXO40Q9UH90 709 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 DIS3Q9Y2L1 958 aaKnown RBP10.24□□□□□ -0.77
ITGB1-217ENST00000494395 RPTORQ8N122 1335 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 WDR19Q8NEZ3 1342 aa10.24□□□□□ -0.77
ITGB1-217ENST00000494395 ERICH2A1L162 156 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 TNRC18O15417 2968 aaPredicted RBP10.23□□□□□ -0.77
ITGB1-217ENST00000494395 PGK2P07205 417 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 PARP1P09874 1014 aaKnown RBP10.23□□□□□ -0.77
ITGB1-217ENST00000494395 CYBAP13498 195 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 EN2P19622 333 aaPredicted RBP10.23□□□□□ -0.77
ITGB1-217ENST00000494395 PBX2P40425 430 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 LIFRP42702 1097 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 KCTD2Q14681 263 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 CCDC174Q6PII3 467 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 UBE2Q1Q7Z7E8 422 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 DPP9Q86TI2 863 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 ADGRF4Q8IZF3 695 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 ZNF687Q8N1G0 1237 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 TRPV1Q8NER1 839 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 NEK1Q96PY6 1258 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 MAP3K14Q99558 947 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 USP26Q9BXU7 913 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.23□□□□□ -0.77
ITGB1-217ENST00000494395 RNF208Q9H0X6 261 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 ACAD9Q9H845 621 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 A1CFQ9NQ94 594 aaKnown RBP10.23□□□□□ -0.77
ITGB1-217ENST00000494395 RNF146Q9NTX7 359 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 SEPT9Q9UHD8 586 aaPredicted RBP10.23□□□□□ -0.77
ITGB1-217ENST00000494395 CCPG1Q9ULG6 757 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 CTDP1Q9Y5B0 961 aaPredicted RBP10.23□□□□□ -0.77
ITGB1-217ENST00000494395 SNX14Q9Y5W7 946 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 ASTN1O14525 1302 aa10.23□□□□□ -0.77
ITGB1-217ENST00000494395 KLRF2D3W0D1 207 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 CYTH3O43739 400 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 DDAH1O94760 285 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 SGPL1O95470 568 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 ALAS1P13196 640 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 CCND3P30281 292 aaPredicted RBP10.22□□□□□ -0.77
ITGB1-217ENST00000494395 CYP2C19P33261 490 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 KRT32Q14532 448 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 SGMS1Q86VZ5 419 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 ZNF654Q8IZM8 581 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 FAM133AQ8N9E0 248 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 RDH13Q8NBN7 331 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 U2AF1L4Q8WU68 220 aaKnown RBP10.22□□□□□ -0.77
ITGB1-217ENST00000494395 CLEC4DQ8WXI8 215 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 TRERF1Q96PN7 1200 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms