RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 USP2O75604 605 aaPredicted RBP3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 GLI1P08151 1106 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 ZYXQ15942 572 aaKnown RBP3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 ZNF326Q5BKZ1 582 aaKnown RBP3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 C9orf131Q5VYM1 1079 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 TDRD10Q5VZ19 366 aaKnown RBP3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 HDAC8Q9BY41 377 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 GPATCH2Q9NW75 528 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 ZFYVE9O95405 1425 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 ALKQ9UM73 1620 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 C9IYK1 514 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 PSPNO60542 156 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 HMGB1P09429 215 aaKnown RBP3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 GBP1P32455 592 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 NBPF8Q3BBV2 869 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 CCDC81Q6ZN84 652 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 RUFY4Q6ZNE9 571 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 PNISRQ8TF01 805 aaKnown RBP3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 TMEM40Q8WWA1 233 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 SPON2Q9BUD6 331 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 GPR62Q9BZJ7 368 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 NSUN3Q9H649 340 aaKnown RBP3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 C4AP0C0L4 1744 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 C4BP0C0L5 1744 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 TJP1Q07157 1748 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 RREB1Q92766 1687 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 TMEM82A0PJX8 343 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 NOTOA8MTQ0 251 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 RGS13O14921 159 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 YBX3P16989 372 aaKnown RBP eCLIP3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 TEKQ02763 1124 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 NMIQ13287 307 aaPredicted RBP3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 NLRC3Q7RTR2 1065 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 SLC6A18Q96N87 628 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 FOXP3Q9BZS1 431 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 SSH2Q76I76 1423 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 PKD1L3Q7Z443 1732 aa3.44□□□□□ -1.86
CDC42EP3-205ENST00000494083 SCN7AQ01118 1682 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 KIF1AQ12756 1690 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 PRAMEF1O95521 474 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 NOS1P29475 1434 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 NBPF12Q5TAG4 269 aaPredicted RBP3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 C9orf84Q5VXU9 1444 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 USP48Q86UV5 1035 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 SIRT2Q8IXJ6 389 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 SLC9A7Q96T83 725 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 RBBP6Q7Z6E9 1792 aaKnown RBP3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 SPEF2Q9C093 1822 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 SHOXO15266 292 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 FARP2O94887 1054 aaPredicted RBP3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 ZNF76P36508 570 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 RBM25P49756 843 aaKnown RBP3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 TMPRSS7Q7RTY8 843 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 CILP2Q8IUL8 1156 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 KIAA0825Q8IV33 1275 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 MYLIPQ8WY64 445 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 COX4I2Q96KJ9 171 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 G6PC3Q9BUM1 346 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 PTPRMP28827 1452 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 ANKRD30AQ9BXX3 1397 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 ATAD5Q96QE3 1844 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 CTSKP43235 329 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 ABHD4Q8TB40 342 aa3.43□□□□□ -1.86
CDC42EP3-205ENST00000494083 ANKRD36CQ5JPF3 1778 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 DIP2BQ9P265 1576 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 POLR3AO14802 1390 aaPredicted RBP3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 PLEKHH1Q9ULM0 1364 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 ATE1O95260 518 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 RPL10P27635 214 aaKnown RBP3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 AFMP43652 599 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 BBS9Q3SYG4 887 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 DCAF15Q66K64 600 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 CRTC3Q6UUV7 619 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 PRDM14Q9GZV8 571 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 TRIT1Q9H3H1 467 aaKnown RBP3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 CNNM2Q9H8M5 875 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 EHMT1Q9H9B1 1298 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 LAMB2P55268 1798 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 BTBD11A6QL63 1104 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 FZD5Q13467 585 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 TMEM67Q5HYA8 995 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 CDCP2Q5VXM1 449 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 KSR1Q8IVT5 923 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 ASPNQ9BXN1 380 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 MKRN2Q9H000 416 aaKnown RBP3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 TCFL5Q9UL49 500 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 KCNH3Q9ULD8 1083 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 RBM47A0AV96 593 aaKnown RBP3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 HPXP02790 462 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 C1QTNF9P0C862 333 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 NBPF9Q3BBW0 867 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 PPFIBP1Q86W92 1011 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 TCTN2Q96GX1 697 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 TESK2Q96S53 571 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 SGPP1Q9BX95 441 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 GFOD1Q9NXC2 390 aa3.42□□□□□ -1.86
CDC42EP3-205ENST00000494083 DOCK2Q92608 1830 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 UNCXA6NJT0 531 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 CLEC16AQ2KHT3 1053 aa3.41□□□□□ -1.86
CDC42EP3-205ENST00000494083 FBXW10Q5XX13 1052 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms