RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 SGSM2O43147 1006 aa10□□□□□ -0.81
LRCH3-219ENST00000494069 ASGR1P07306 291 aa10□□□□□ -0.81
LRCH3-219ENST00000494069 CALML3P27482 149 aa10□□□□□ -0.81
LRCH3-219ENST00000494069 TNFAIP2Q03169 654 aa10□□□□□ -0.81
LRCH3-219ENST00000494069 SEC23AQ15436 765 aa10□□□□□ -0.81
LRCH3-219ENST00000494069 USH1GQ495M9 461 aa10□□□□□ -0.81
LRCH3-219ENST00000494069 GNASQ5JWF2 1037 aa10□□□□□ -0.81
LRCH3-219ENST00000494069 C1orf53Q5VUE5 145 aa10□□□□□ -0.81
LRCH3-219ENST00000494069 STOX1Q6ZVD7 989 aa10□□□□□ -0.81
LRCH3-219ENST00000494069 NOL8Q76FK4 1167 aaKnown RBP10□□□□□ -0.81
LRCH3-219ENST00000494069 ADGRF4Q8IZF3 695 aa10□□□□□ -0.81
LRCH3-219ENST00000494069 STAG2Q8N3U4 1231 aa10□□□□□ -0.81
LRCH3-219ENST00000494069 TSEN34Q9BSV6 310 aaKnown RBP10□□□□□ -0.81
LRCH3-219ENST00000494069 KRT23Q9C075 422 aa10□□□□□ -0.81
LRCH3-219ENST00000494069 UPF3AQ9H1J1 476 aaKnown RBP10□□□□□ -0.81
LRCH3-219ENST00000494069 SENP2Q9HC62 589 aa10□□□□□ -0.81
LRCH3-219ENST00000494069 STARD7Q9NQZ5 370 aa10□□□□□ -0.81
LRCH3-219ENST00000494069 PRKAG2Q9UGJ0 569 aa10□□□□□ -0.81
LRCH3-219ENST00000494069 GNEQ9Y223 722 aaKnown RBP10□□□□□ -0.81
LRCH3-219ENST00000494069 RAD50Q92878 1312 aa10□□□□□ -0.81
LRCH3-219ENST00000494069 LAMA2P24043 3122 aaKnown RBP10□□□□□ -0.81
LRCH3-219ENST00000494069 MOXD2PA6NHM9 499 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 DYNC1LI2O43237 492 aaPredicted RBP9.99□□□□□ -0.81
LRCH3-219ENST00000494069 CLTBP09497 229 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 CST5P28325 142 aaPredicted RBP9.99□□□□□ -0.81
LRCH3-219ENST00000494069 ALDH5A1P51649 535 aaPredicted RBP9.99□□□□□ -0.81
LRCH3-219ENST00000494069 EPHB4P54760 987 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 RPS6P62753 249 aaKnown RBP9.99□□□□□ -0.81
LRCH3-219ENST00000494069 FAAP100Q0VG06 881 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 COL9A3Q14050 684 aaPredicted RBP9.99□□□□□ -0.81
LRCH3-219ENST00000494069 GSE1Q14687 1217 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 SHHQ15465 462 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 CDC37Q16543 378 aaPredicted RBP9.99□□□□□ -0.81
LRCH3-219ENST00000494069 SLC35G1Q2M3R5 365 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 LRIT3Q3SXY7 679 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 C9orf50Q5SZB4 431 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 GPATCH4Q5T3I0 446 aaKnown RBP9.99□□□□□ -0.81
LRCH3-219ENST00000494069 IFIT1BQ5T764 474 aaKnown RBP9.99□□□□□ -0.81
LRCH3-219ENST00000494069 RNF207Q6ZRF8 634 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 Q7L0L9 218 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 CHST3Q7LGC8 479 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 TLK2Q86UE8 772 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 MORC4Q8TE76 937 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 RUFY2Q8WXA3 655 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 UBAC1Q9BSL1 405 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 CNNM2Q9H8M5 875 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 WDR19Q8NEZ3 1342 aa9.99□□□□□ -0.81
LRCH3-219ENST00000494069 LTBP2Q14767 1821 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 E7EWF7 191 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 PARP1P09874 1014 aaKnown RBP9.98□□□□□ -0.81
LRCH3-219ENST00000494069 CDK7P50613 346 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 NKX3-2P78367 333 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 QRICH1Q2TAL8 776 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 ASPRV1Q53RT3 343 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 CCDC178Q5BJE1 867 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 IQSEC1Q6DN90 963 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 CXCL17Q6UXB2 119 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 KIAA1211Q6ZU35 1233 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 ANKRD33Q7Z3H0 272 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 NUP133Q8WUM0 1156 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 VTI1AQ96AJ9 217 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 GLT1D1Q96MS3 346 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 JMJD4Q9H9V9 463 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 SPC25Q9HBM1 224 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 GPHNQ9NQX3 736 aaPredicted RBP9.98□□□□□ -0.81
LRCH3-219ENST00000494069 COL20A1Q9P218 1284 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 PCDHB8Q9UN66 801 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 GRIN2DO15399 1336 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 LRRC37A2A6NM11 1700 aa9.98□□□□□ -0.81
LRCH3-219ENST00000494069 KIAA0355O15063 1070 aa9.97□□□□□ -0.81
LRCH3-219ENST00000494069 DHX16O60231 1041 aaKnown RBP9.97□□□□□ -0.81
LRCH3-219ENST00000494069 PPP1R11O60927 126 aaPredicted RBP9.97□□□□□ -0.81
LRCH3-219ENST00000494069 TIE1P35590 1138 aa9.97□□□□□ -0.81
LRCH3-219ENST00000494069 NT5C2P49902 561 aa9.97□□□□□ -0.81
LRCH3-219ENST00000494069 ANTXR2P58335 489 aa9.97□□□□□ -0.81
LRCH3-219ENST00000494069 PSMC6P62333 389 aa9.97□□□□□ -0.81
LRCH3-219ENST00000494069 PCSK9Q8NBP7 692 aaKnown RBP9.97□□□□□ -0.81
LRCH3-219ENST00000494069 PPP1R13LQ8WUF5 828 aa9.97□□□□□ -0.81
LRCH3-219ENST00000494069 COPS5Q92905 334 aa9.97□□□□□ -0.81
LRCH3-219ENST00000494069 MAP4K1Q92918 833 aa9.97□□□□□ -0.81
LRCH3-219ENST00000494069 TAAR1Q96RJ0 339 aa9.97□□□□□ -0.81
LRCH3-219ENST00000494069 WDR11Q9BZH6 1224 aa9.97□□□□□ -0.81
LRCH3-219ENST00000494069 AP5M1Q9H0R1 490 aa9.97□□□□□ -0.81
LRCH3-219ENST00000494069 VTA1Q9NP79 307 aa9.97□□□□□ -0.81
LRCH3-219ENST00000494069 TMEM39AQ9NV64 488 aa9.97□□□□□ -0.81
LRCH3-219ENST00000494069 MAD2L2Q9UI95 211 aa9.97□□□□□ -0.81
LRCH3-219ENST00000494069 CIZ1Q9ULV3 898 aaPredicted RBP9.97□□□□□ -0.81
LRCH3-219ENST00000494069 RBM8AQ9Y5S9 174 aaKnown RBP9.97□□□□□ -0.81
LRCH3-219ENST00000494069 ELP1O95163 1332 aa9.97□□□□□ -0.81
LRCH3-219ENST00000494069 RBM47A0AV96 593 aaKnown RBP9.96□□□□□ -0.82
LRCH3-219ENST00000494069 PALM3A6NDB9 673 aaPredicted RBP9.96□□□□□ -0.82
LRCH3-219ENST00000494069 TTLL13PA6NNM8 815 aa9.96□□□□□ -0.82
LRCH3-219ENST00000494069 KLRF2D3W0D1 207 aa9.96□□□□□ -0.82
LRCH3-219ENST00000494069 ARVCFO00192 962 aa9.96□□□□□ -0.82
LRCH3-219ENST00000494069 OPLAHO14841 1288 aa9.96□□□□□ -0.82
LRCH3-219ENST00000494069 IFIT3O14879 490 aaKnown RBP9.96□□□□□ -0.82
LRCH3-219ENST00000494069 RAG1P15918 1043 aa9.96□□□□□ -0.82
LRCH3-219ENST00000494069 EDNRBP24530 442 aa9.96□□□□□ -0.82
LRCH3-219ENST00000494069 TRDNQ13061 729 aa9.96□□□□□ -0.82
LRCH3-219ENST00000494069 FSCN1Q16658 493 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms