RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 SCRN1Q12765 414 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 TTF1Q15361 905 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-213ENST00000494016 UBE3CQ15386 1083 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 ALX1Q15699 326 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 SLC15A2Q16348 729 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 PERM1Q5SV97 790 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 SLC9C2Q5TAH2 1124 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 COL13A1Q5TAT6 717 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-213ENST00000494016 TBC1D9BQ66K14 1250 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 ZSCAN25Q6NSZ9 544 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 PSAPL1Q6NUJ1 521 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 HFE2Q6ZVN8 426 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 Q8N3U1 123 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 C1orf127Q8N9H9 656 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 SPATA5Q8NB90 893 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 BRF1Q92994 677 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 ZNF274Q96GC6 653 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-213ENST00000494016 NSUN5Q96P11 429 aaKnown RBP7.06□□□□□ -1.28
CPSF7-213ENST00000494016 STRBPQ96SI9 672 aaKnown RBP7.06□□□□□ -1.28
CPSF7-213ENST00000494016 MPHOSPH8Q99549 860 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 LPIN3Q9BQK8 851 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 RBSNQ9H1K0 784 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 FRRS1LQ9P0K9 344 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 BCCIPQ9P287 314 aaKnown RBP eCLIP7.06□□□□□ -1.28
CPSF7-213ENST00000494016 NARFQ9UHQ1 456 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 DCTN4Q9UJW0 460 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 ZNF652Q9Y2D9 606 aa7.06□□□□□ -1.28
CPSF7-213ENST00000494016 PNPLA7Q6ZV29 1317 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 ZNF532Q9HCE3 1301 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 PHF20L1A8MW92 1017 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 J3QW42 95 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 GPAA1O43292 621 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 KIF4AO95239 1232 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 IGHA2P01877 340 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 PDE6AP16499 860 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 PDIA3P30101 505 aaKnown RBP7.05□□□□□ -1.28
CPSF7-213ENST00000494016 IGHMBP2P38935 993 aaKnown RBP7.05□□□□□ -1.28
CPSF7-213ENST00000494016 ANTXR2P58335 489 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 CHRNDQ07001 517 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 HYAL2Q12891 473 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 IMMTQ16891 758 aaKnown RBP7.05□□□□□ -1.28
CPSF7-213ENST00000494016 CHST3Q7LGC8 479 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 AMIGO3Q86WK7 504 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 MB21D2Q8IYB1 491 aaPredicted RBP7.05□□□□□ -1.28
CPSF7-213ENST00000494016 SNX29Q8TEQ0 813 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 TTC9Q92623 222 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 PMEPA1Q969W9 287 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 LLPHQ9BRT6 129 aaKnown RBP7.05□□□□□ -1.28
CPSF7-213ENST00000494016 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.05□□□□□ -1.28
CPSF7-213ENST00000494016 CHRDQ9H2X0 955 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 SRP68Q9UHB9 627 aaKnown RBP7.05□□□□□ -1.28
CPSF7-213ENST00000494016 WWC3Q9ULE0 1092 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 TACC3Q9Y6A5 838 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 DOCK2Q92608 1830 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 A0A1B0GUL6 1792 aa7.05□□□□□ -1.28
CPSF7-213ENST00000494016 VPS37CA5D8V6 355 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-213ENST00000494016 PIK3R2O00459 728 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 GNB5O14775 395 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 LILRB5O75023 590 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 IDH1O75874 414 aaKnown RBP7.04□□□□□ -1.28
CPSF7-213ENST00000494016 RGS9O75916 674 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-213ENST00000494016 EIF2AK2P19525 551 aaKnown RBP7.04□□□□□ -1.28
CPSF7-213ENST00000494016 PDCP20941 246 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 CES1P23141 567 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 TM4SF1P30408 202 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 HAND2P61296 217 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 CCT2P78371 535 aaKnown RBP7.04□□□□□ -1.28
CPSF7-213ENST00000494016 RASGRF1Q13972 1273 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 FAM173BQ6P4H8 233 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 ELMSAN1Q6PJG2 1045 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 LRSAM1Q6UWE0 723 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 C8orf86Q6ZUL3 223 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 CDC37L1Q7L3B6 337 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 NSUN7Q8NE18 718 aaKnown RBP7.04□□□□□ -1.28
CPSF7-213ENST00000494016 NUDT8Q8WV74 236 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 MTFR1LQ9H019 292 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 JPH1Q9HDC5 661 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-213ENST00000494016 BSDC1Q9NW68 430 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-213ENST00000494016 SALL4Q9UJQ4 1053 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 FOXD3Q9UJU5 478 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-213ENST00000494016 MINPP1Q9UNW1 487 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 ATP6V1DQ9Y5K8 247 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 C4AP0C0L4 1744 aa7.04□□□□□ -1.28
CPSF7-213ENST00000494016 SYCE3A1L190 88 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 GSG1L2A8MUP6 293 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 ZNF213O14771 459 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 PHACTR2O75167 634 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 GHRHP01286 108 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 FDPSP14324 419 aaKnown RBP7.03□□□□□ -1.28
CPSF7-213ENST00000494016 MCM5P33992 734 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 UBE2HP62256 183 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 RESTQ13127 1097 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 UBE4AQ14139 1066 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 SND1Q7KZF4 910 aaKnown RBP eCLIP7.03□□□□□ -1.28
CPSF7-213ENST00000494016 CYB5R4Q7L1T6 521 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 FBXO33Q7Z6M2 555 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 TTC6Q86TZ1 520 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 FERMT3Q86UX7 667 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 MAGEB6Q8N7X4 407 aa7.03□□□□□ -1.28
CPSF7-213ENST00000494016 NCOA7Q8NI08 942 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms