RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 CRACR2BQ8N4Y2 399 aaPredicted RBP12.22□□□□□ -0.45
PDLIM1-205ENST00000493949 RGS22Q8NE09 1264 aa12.22□□□□□ -0.45
PDLIM1-205ENST00000493949 KLHDC9Q8NEP7 349 aa12.22□□□□□ -0.45
PDLIM1-205ENST00000493949 XAGE2Q96GT9 111 aa12.22□□□□□ -0.45
PDLIM1-205ENST00000493949 SPATC1LQ9H0A9 340 aa12.22□□□□□ -0.45
PDLIM1-205ENST00000493949 ZSCAN16Q9H4T2 348 aaPredicted RBP12.22□□□□□ -0.45
PDLIM1-205ENST00000493949 MROH8Q9H579 483 aa12.22□□□□□ -0.45
PDLIM1-205ENST00000493949 CD320Q9NPF0 282 aa12.22□□□□□ -0.45
PDLIM1-205ENST00000493949 PCDHA11Q9Y5I1 949 aa12.22□□□□□ -0.45
PDLIM1-205ENST00000493949 FLT1P17948 1338 aa12.21□□□□□ -0.45
PDLIM1-205ENST00000493949 A0A1B0GUL7 405 aa12.21□□□□□ -0.45
PDLIM1-205ENST00000493949 GH2P01242 217 aa12.21□□□□□ -0.45
PDLIM1-205ENST00000493949 AKR1A1P14550 325 aa12.21□□□□□ -0.45
PDLIM1-205ENST00000493949 CASTP20810 708 aaKnown RBP12.21□□□□□ -0.45
PDLIM1-205ENST00000493949 PPP4CP60510 307 aa12.21□□□□□ -0.45
PDLIM1-205ENST00000493949 TFCP2Q12800 502 aa12.21□□□□□ -0.45
PDLIM1-205ENST00000493949 NECTIN1Q15223 517 aa12.21□□□□□ -0.45
PDLIM1-205ENST00000493949 TATDN1Q6P1N9 297 aa12.21□□□□□ -0.45
PDLIM1-205ENST00000493949 ZNF710Q8N1W2 664 aa12.21□□□□□ -0.45
PDLIM1-205ENST00000493949 TRIM34Q9BYJ4 488 aa12.21□□□□□ -0.45
PDLIM1-205ENST00000493949 RPAP3Q9H6T3 665 aaPredicted RBP12.21□□□□□ -0.45
PDLIM1-205ENST00000493949 HOXC10Q9NYD6 342 aa12.21□□□□□ -0.45
PDLIM1-205ENST00000493949 SRGAP3O43295 1099 aa12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 FIBPO43427 364 aa12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 GTPBP6O43824 516 aaPredicted RBP12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 FGBP02675 491 aa12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 ZNF865P0CJ78 1059 aaPredicted RBP12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 PLCG2P16885 1265 aa12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 ZSCAN20P17040 1043 aaPredicted RBP12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 CST5P28325 142 aaPredicted RBP12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 TYRO3Q06418 890 aa12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 COG2Q14746 738 aa12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 ZYXQ15942 572 aaKnown RBP12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 FOXD4L5Q5VV16 416 aaPredicted RBP12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 ADGRA1Q86SQ6 560 aa12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 PLA2G4DQ86XP0 818 aa12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 MAPKAPK5Q8IW41 473 aa12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 FOXD4L4Q8WXT5 416 aaPredicted RBP12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 MAP4K1Q92918 833 aa12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 HLA-CQ95604 372 aa12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 TINF2Q9BSI4 451 aa12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 CLSTN2Q9H4D0 955 aa12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 OGFRQ9NZT2 677 aa12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 DIS3Q9Y2L1 958 aaKnown RBP12.2□□□□□ -0.46
PDLIM1-205ENST00000493949 SYNRGQ9UMZ2 1314 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 LAMA4Q16363 1823 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 GOLGA6L4A6NEF3 574 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 KCNJ6P48051 423 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 KCNA10Q16322 511 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 SLFNL1Q499Z3 407 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 FAM126BQ8IXS8 530 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 MB21D1Q8N884 522 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 ACER1Q8TDN7 264 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 TGFBRAP1Q8WUH2 860 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 MRFAP1L1Q96HT8 127 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 FBXL18Q96ME1 805 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 GLT1D1Q96MS3 346 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 JAKMIP1Q96N16 626 aaKnown RBP12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 LLPHQ9BRT6 129 aaKnown RBP12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 TNMDQ9H2S6 317 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 TTC12Q9H892 705 aaPredicted RBP12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 GDPD2Q9HCC8 539 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 AATFQ9NY61 560 aaKnown RBP eCLIP12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 RAI14Q9P0K7 980 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 SAP30BPQ9UHR5 308 aaKnown RBP12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 CFAP45Q9UL16 551 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 MCM3APO60318 1980 aa12.19□□□□□ -0.46
PDLIM1-205ENST00000493949 ARVCFO00192 962 aa12.18□□□□□ -0.46
PDLIM1-205ENST00000493949 BAG3O95817 575 aa12.18□□□□□ -0.46
PDLIM1-205ENST00000493949 CD4P01730 458 aa12.18□□□□□ -0.46
PDLIM1-205ENST00000493949 HLA-DOAP06340 250 aa12.18□□□□□ -0.46
PDLIM1-205ENST00000493949 FCER1AP12319 257 aa12.18□□□□□ -0.46
PDLIM1-205ENST00000493949 TAL1P17542 331 aaPredicted RBP12.18□□□□□ -0.46
PDLIM1-205ENST00000493949 MCAMP43121 646 aa12.18□□□□□ -0.46
PDLIM1-205ENST00000493949 RABGGTBP53611 331 aa12.18□□□□□ -0.46
PDLIM1-205ENST00000493949 LARP1BQ659C4 914 aaKnown RBP12.18□□□□□ -0.46
PDLIM1-205ENST00000493949 SPATA5Q8NB90 893 aa12.18□□□□□ -0.46
PDLIM1-205ENST00000493949 NEUROD6Q96NK8 337 aa12.18□□□□□ -0.46
PDLIM1-205ENST00000493949 NOL10Q9BSC4 688 aaKnown RBP12.18□□□□□ -0.46
PDLIM1-205ENST00000493949 COPRSQ9NQ92 184 aa12.18□□□□□ -0.46
PDLIM1-205ENST00000493949 COL4A4P53420 1690 aaPredicted RBP12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 RIOK3O14730 519 aaKnown RBP12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 TLR3O15455 904 aaKnown RBP12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 HMGB1P09429 215 aaKnown RBP12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 IFIT2P09913 472 aaKnown RBP12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 ALADP13716 330 aa12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 MYOGP15173 224 aa12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 ZNF75DP51815 510 aa12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 FOXK2Q01167 660 aa12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 DNM1Q05193 864 aaKnown RBP12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 PPP4R3BQ5MIZ7 849 aa12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 BLOC1S2Q6QNY1 142 aa12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 OTOP2Q7RTS6 562 aa12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 CCDC83Q8IWF9 413 aa12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 LENG1Q96BZ8 264 aaPredicted RBP12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 PPP1R12CQ9BZL4 782 aa12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 EHD4Q9H223 541 aa12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 KCNF1Q9H3M0 494 aa12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 IL1RAPL2Q9NP60 686 aa12.17□□□□□ -0.46
PDLIM1-205ENST00000493949 MRVI1Q9Y6F6 885 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms