RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CALM1P0DP23 149 aa26.28■■□□□ 1.8
SNIP1-203ENST00000493916 CALM2P0DP24 149 aa26.28■■□□□ 1.8
SNIP1-203ENST00000493916 CALM3P0DP25 149 aa26.28■■□□□ 1.8
SNIP1-203ENST00000493916 EDNRBP24530 442 aa26.28■■□□□ 1.8
SNIP1-203ENST00000493916 TRAF1Q13077 416 aa26.28■■□□□ 1.8
SNIP1-203ENST00000493916 FBXO16Q8IX29 292 aaPredicted RBP26.28■■□□□ 1.8
SNIP1-203ENST00000493916 KLHDC9Q8NEP7 349 aa26.28■■□□□ 1.8
SNIP1-203ENST00000493916 MPHOSPH6Q99547 160 aaKnown RBP26.28■■□□□ 1.8
SNIP1-203ENST00000493916 TSEN34Q9BSV6 310 aaKnown RBP26.28■■□□□ 1.8
SNIP1-203ENST00000493916 CEP290O15078 2479 aa26.27■■□□□ 1.8
SNIP1-203ENST00000493916 CST5P28325 142 aaPredicted RBP26.27■■□□□ 1.8
SNIP1-203ENST00000493916 HSPA4P34932 840 aa26.27■■□□□ 1.8
SNIP1-203ENST00000493916 ADCYAP1R1P41586 468 aa26.27■■□□□ 1.8
SNIP1-203ENST00000493916 GJA9P57773 515 aa26.27■■□□□ 1.8
SNIP1-203ENST00000493916 EXOSC10Q01780 885 aaKnown RBP26.27■■□□□ 1.8
SNIP1-203ENST00000493916 GHRHRQ02643 423 aa26.27■■□□□ 1.8
SNIP1-203ENST00000493916 ADCK5Q3MIX3 580 aa26.27■■□□□ 1.8
SNIP1-203ENST00000493916 TAPT1Q6NXT6 567 aa26.27■■□□□ 1.8
SNIP1-203ENST00000493916 DHX32Q7L7V1 743 aaKnown RBP26.27■■□□□ 1.8
SNIP1-203ENST00000493916 HOMER1Q86YM7 354 aa26.27■■□□□ 1.8
SNIP1-203ENST00000493916 PIGSQ96S52 555 aa26.27■■□□□ 1.8
SNIP1-203ENST00000493916 LZTS2Q9BRK4 669 aa26.27■■□□□ 1.8
SNIP1-203ENST00000493916 SPZ1Q9BXG8 430 aa26.27■■□□□ 1.8
SNIP1-203ENST00000493916 LRRC2Q9BYS8 371 aa26.27■■□□□ 1.8
SNIP1-203ENST00000493916 EPB41L2O43491 1005 aaKnown RBP26.26■■□□□ 1.79
SNIP1-203ENST00000493916 HMGB1P09429 215 aaKnown RBP26.26■■□□□ 1.79
SNIP1-203ENST00000493916 SMARCA1P28370 1054 aa26.26■■□□□ 1.79
SNIP1-203ENST00000493916 NKX3-2P78367 333 aa26.26■■□□□ 1.79
SNIP1-203ENST00000493916 TNFAIP2Q03169 654 aa26.26■■□□□ 1.79
SNIP1-203ENST00000493916 SNX17Q15036 470 aa26.26■■□□□ 1.79
SNIP1-203ENST00000493916 CCSAPQ6IQ19 270 aaPredicted RBP26.26■■□□□ 1.79
SNIP1-203ENST00000493916 SYTL5Q8TDW5 730 aaPredicted RBP26.26■■□□□ 1.79
SNIP1-203ENST00000493916 SPC25Q9HBM1 224 aa26.26■■□□□ 1.79
SNIP1-203ENST00000493916 PCDHA1Q9Y5I3 950 aa26.26■■□□□ 1.79
SNIP1-203ENST00000493916 SLC12A7Q9Y666 1083 aa26.26■■□□□ 1.79
SNIP1-203ENST00000493916 PNMA6FA0A0J9YX94 578 aa26.25■■□□□ 1.79
SNIP1-203ENST00000493916 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.25■■□□□ 1.79
SNIP1-203ENST00000493916 B4DLN1 442 aa26.25■■□□□ 1.79
SNIP1-203ENST00000493916 OPLAHO14841 1288 aa26.25■■□□□ 1.79
SNIP1-203ENST00000493916 GNAQP50148 359 aa26.25■■□□□ 1.79
SNIP1-203ENST00000493916 MRPL12P52815 198 aaKnown RBP26.25■■□□□ 1.79
SNIP1-203ENST00000493916 ATN1P54259 1190 aaPredicted RBP26.25■■□□□ 1.79
SNIP1-203ENST00000493916 IQSEC1Q6DN90 963 aa26.25■■□□□ 1.79
SNIP1-203ENST00000493916 SLC39A5Q6ZMH5 540 aa26.25■■□□□ 1.79
SNIP1-203ENST00000493916 TBC1D5Q92609 795 aa26.25■■□□□ 1.79
SNIP1-203ENST00000493916 GNEQ9Y223 722 aaKnown RBP26.25■■□□□ 1.79
SNIP1-203ENST00000493916 MOXD2PA6NHM9 499 aa26.24■■□□□ 1.79
SNIP1-203ENST00000493916 HSD17B4P51659 736 aa26.24■■□□□ 1.79
SNIP1-203ENST00000493916 C1orf53Q5VUE5 145 aa26.24■■□□□ 1.79
SNIP1-203ENST00000493916 EEPD1Q7L9B9 569 aa26.24■■□□□ 1.79
SNIP1-203ENST00000493916 SAMD3Q8N6K7 520 aa26.24■■□□□ 1.79
SNIP1-203ENST00000493916 PDGFCQ9NRA1 345 aa26.24■■□□□ 1.79
SNIP1-203ENST00000493916 MAP3K20Q9NYL2 800 aaKnown RBP26.24■■□□□ 1.79
SNIP1-203ENST00000493916 COL20A1Q9P218 1284 aa26.24■■□□□ 1.79
SNIP1-203ENST00000493916 A0A1W2PQ45 241 aaPredicted RBP26.23■■□□□ 1.79
SNIP1-203ENST00000493916 A0A1W2PQY0 241 aa26.23■■□□□ 1.79
SNIP1-203ENST00000493916 RBM47A0AV96 593 aaKnown RBP26.23■■□□□ 1.79
SNIP1-203ENST00000493916 MYADML2A6NDP7 307 aa26.23■■□□□ 1.79
SNIP1-203ENST00000493916 C6orf222P0C671 652 aaPredicted RBP26.23■■□□□ 1.79
SNIP1-203ENST00000493916 SMPD1P17405 629 aa26.23■■□□□ 1.79
SNIP1-203ENST00000493916 ACLYP53396 1101 aa26.23■■□□□ 1.79
SNIP1-203ENST00000493916 RTP1P59025 263 aa26.23■■□□□ 1.79
SNIP1-203ENST00000493916 PDE4DQ08499 809 aa26.23■■□□□ 1.79
SNIP1-203ENST00000493916 FERMT2Q96AC1 680 aa26.23■■□□□ 1.79
SNIP1-203ENST00000493916 Q9Y3F1 56 aa26.23■■□□□ 1.79
SNIP1-203ENST00000493916 SNX14Q9Y5W7 946 aa26.23■■□□□ 1.79
SNIP1-203ENST00000493916 CTAGE5O15320 804 aa26.22■■□□□ 1.79
SNIP1-203ENST00000493916 KCNA10Q16322 511 aa26.22■■□□□ 1.79
SNIP1-203ENST00000493916 TLK2Q86UE8 772 aa26.22■■□□□ 1.79
SNIP1-203ENST00000493916 PCSK9Q8NBP7 692 aaKnown RBP26.22■■□□□ 1.79
SNIP1-203ENST00000493916 NSUN6Q8TEA1 469 aaKnown RBP26.22■■□□□ 1.79
SNIP1-203ENST00000493916 COLQQ9Y215 455 aaPredicted RBP26.22■■□□□ 1.79
SNIP1-203ENST00000493916 PLEKHA8P1O95397 391 aa26.21■■□□□ 1.79
SNIP1-203ENST00000493916 CFBP00751 764 aa26.21■■□□□ 1.79
SNIP1-203ENST00000493916 RXRAP19793 462 aa26.21■■□□□ 1.79
SNIP1-203ENST00000493916 APOA5Q6Q788 366 aa26.21■■□□□ 1.79
SNIP1-203ENST00000493916 CHRDL2Q6WN34 429 aa26.21■■□□□ 1.79
SNIP1-203ENST00000493916 SYNE3Q6ZMZ3 975 aa26.21■■□□□ 1.79
SNIP1-203ENST00000493916 NOL8Q76FK4 1167 aaKnown RBP26.21■■□□□ 1.79
SNIP1-203ENST00000493916 SRBD1Q8N5C6 995 aaKnown RBP26.21■■□□□ 1.79
SNIP1-203ENST00000493916 FANCBQ8NB91 859 aa26.21■■□□□ 1.79
SNIP1-203ENST00000493916 RRP36Q96EU6 259 aaKnown RBP26.21■■□□□ 1.79
SNIP1-203ENST00000493916 TCEANC2Q96MN5 208 aa26.21■■□□□ 1.79
SNIP1-203ENST00000493916 TAAR1Q96RJ0 339 aa26.21■■□□□ 1.79
SNIP1-203ENST00000493916 IWS1Q96ST2 819 aa26.21■■□□□ 1.79
SNIP1-203ENST00000493916 RMDN3Q96TC7 470 aa26.21■■□□□ 1.79
SNIP1-203ENST00000493916 PRO3102Q9H379 93 aa26.21■■□□□ 1.79
SNIP1-203ENST00000493916 ZMYND8Q9ULU4 1186 aaPredicted RBP26.21■■□□□ 1.79
SNIP1-203ENST00000493916 DUSP28Q4G0W2 176 aa26.2■■□□□ 1.78
SNIP1-203ENST00000493916 MICU3Q86XE3 530 aa26.2■■□□□ 1.78
SNIP1-203ENST00000493916 JAKMIP1Q96N16 626 aaKnown RBP26.2■■□□□ 1.78
SNIP1-203ENST00000493916 IRX5P78411 483 aaPredicted RBP26.19■■□□□ 1.78
SNIP1-203ENST00000493916 GNASQ5JWF2 1037 aa26.19■■□□□ 1.78
SNIP1-203ENST00000493916 TMTC3Q6ZXV5 915 aa26.19■■□□□ 1.78
SNIP1-203ENST00000493916 WDR11Q9BZH6 1224 aa26.19■■□□□ 1.78
SNIP1-203ENST00000493916 AP5M1Q9H0R1 490 aa26.19■■□□□ 1.78
SNIP1-203ENST00000493916 SEC63Q9UGP8 760 aaKnown RBP26.19■■□□□ 1.78
SNIP1-203ENST00000493916 ATP11BQ9Y2G3 1177 aa26.19■■□□□ 1.78
SNIP1-203ENST00000493916 RANBP2P49792 3224 aaKnown RBP26.19■■□□□ 1.78
SNIP1-203ENST00000493916 ASGR1P07306 291 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms