RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 TAF5LO75529 589 aa8.01□□□□□ -1.13
TRA2B-216ENST00000493864 BBOX1O75936 387 aa8.01□□□□□ -1.13
TRA2B-216ENST00000493864 B3GALT4O96024 378 aa8.01□□□□□ -1.13
TRA2B-216ENST00000493864 YBX3P16989 372 aaKnown RBP eCLIP8.01□□□□□ -1.13
TRA2B-216ENST00000493864 COL8A1P27658 744 aa8.01□□□□□ -1.13
TRA2B-216ENST00000493864 TIMM10P62072 90 aa8.01□□□□□ -1.13
TRA2B-216ENST00000493864 GSTM4Q03013 218 aa8.01□□□□□ -1.13
TRA2B-216ENST00000493864 GRAPQ13588 217 aa8.01□□□□□ -1.13
TRA2B-216ENST00000493864 TSNAXIP1Q2TAA8 658 aa8.01□□□□□ -1.13
TRA2B-216ENST00000493864 METTL24Q5JXM2 366 aa8.01□□□□□ -1.13
TRA2B-216ENST00000493864 FBXO11Q86XK2 927 aa8.01□□□□□ -1.13
TRA2B-216ENST00000493864 KLHL23Q8NBE8 558 aa8.01□□□□□ -1.13
TRA2B-216ENST00000493864 GRAPLQ8TC17 118 aaPredicted RBP8.01□□□□□ -1.13
TRA2B-216ENST00000493864 ZNF622Q969S3 477 aaKnown RBP eCLIP8.01□□□□□ -1.13
TRA2B-216ENST00000493864 CCDC8Q9H0W5 538 aaPredicted RBP8.01□□□□□ -1.13
TRA2B-216ENST00000493864 RNF225M0QZC1 329 aaPredicted RBP8□□□□□ -1.13
TRA2B-216ENST00000493864 DPEP1P16444 411 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 KCNA3P22001 575 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 CHRNDQ07001 517 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 TAF1CQ15572 869 aaPredicted RBP8□□□□□ -1.13
TRA2B-216ENST00000493864 GRIK4Q16099 956 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 GPR162Q16538 588 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 TNNI3KQ59H18 835 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 STYK1Q6J9G0 422 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 AACSQ86V21 672 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 CLASRPQ8N2M8 674 aaKnown RBP8□□□□□ -1.13
TRA2B-216ENST00000493864 VGLL2Q8N8G2 317 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 MASTLQ96GX5 879 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 NEUROD6Q96NK8 337 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 BACH2Q9BYV9 841 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 OSGEPQ9NPF4 335 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 GPR108Q9NPR9 543 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 TMEM39AQ9NV64 488 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 FPGT-TNNI3KV9GXZ4 949 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 C10orf71Q711Q0 1435 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 SBF1O95248 1867 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 MROH5Q6ZUA9 1318 aa8□□□□□ -1.13
TRA2B-216ENST00000493864 DDX3YO15523 660 aaKnown RBP7.99□□□□□ -1.13
TRA2B-216ENST00000493864 PDE8BO95263 885 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 IFIT2P09913 472 aaKnown RBP7.99□□□□□ -1.13
TRA2B-216ENST00000493864 SPATA31C1P0DKV0 1188 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 ELNP15502 786 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 ADORA1P30542 326 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 ALDH1B1P30837 517 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 CD68P34810 354 aaPredicted RBP7.99□□□□□ -1.13
TRA2B-216ENST00000493864 PDE1AP54750 535 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 NLRP12P59046 1061 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 PPP2R3AQ06190 1150 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 SUZ12Q15022 739 aaKnown RBP7.99□□□□□ -1.13
TRA2B-216ENST00000493864 ATP2B3Q16720 1220 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 TSHZ3Q63HK5 1081 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 OLFM4Q6UX06 510 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 TMEM87AQ8NBN3 555 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 DBNDD2Q9BQY9 259 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 CEP44Q9C0F1 390 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 SOX17Q9H6I2 414 aaPredicted RBP7.99□□□□□ -1.13
TRA2B-216ENST00000493864 STAP2Q9UGK3 403 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 CD2APQ9Y5K6 639 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 SALL3Q9BXA9 1300 aa7.99□□□□□ -1.13
TRA2B-216ENST00000493864 A0A1B0GUL7 405 aa7.98□□□□□ -1.13
TRA2B-216ENST00000493864 DLL1O00548 723 aa7.98□□□□□ -1.13
TRA2B-216ENST00000493864 FGFR2P21802 821 aa7.98□□□□□ -1.13
TRA2B-216ENST00000493864 TGFB2P61812 414 aa7.98□□□□□ -1.13
TRA2B-216ENST00000493864 GPSM2P81274 684 aa7.98□□□□□ -1.13
TRA2B-216ENST00000493864 CCDC85BQ15834 202 aaPredicted RBP7.98□□□□□ -1.13
TRA2B-216ENST00000493864 FOXD4L6Q3SYB3 417 aaPredicted RBP7.98□□□□□ -1.13
TRA2B-216ENST00000493864 FOXD4L3Q6VB84 417 aaPredicted RBP7.98□□□□□ -1.13
TRA2B-216ENST00000493864 SP8Q8IXZ3 490 aa7.98□□□□□ -1.13
TRA2B-216ENST00000493864 NECAB3Q96P71 396 aaPredicted RBP7.98□□□□□ -1.13
TRA2B-216ENST00000493864 ANKRD2Q9GZV1 360 aa7.98□□□□□ -1.13
TRA2B-216ENST00000493864 KCNK4Q9NYG8 393 aa7.98□□□□□ -1.13
TRA2B-216ENST00000493864 DBNLQ9UJU6 430 aaKnown RBP7.98□□□□□ -1.13
TRA2B-216ENST00000493864 ATP6V0A2Q9Y487 856 aa7.98□□□□□ -1.13
TRA2B-216ENST00000493864 SPEF2Q9C093 1822 aa7.98□□□□□ -1.13
TRA2B-216ENST00000493864 TM4SF5O14894 197 aa7.97□□□□□ -1.13
TRA2B-216ENST00000493864 ADAM11O75078 769 aa7.97□□□□□ -1.13
TRA2B-216ENST00000493864 RECKO95980 971 aa7.97□□□□□ -1.13
TRA2B-216ENST00000493864 CELA3AP09093 270 aa7.97□□□□□ -1.13
TRA2B-216ENST00000493864 MX1P20591 662 aa7.97□□□□□ -1.13
TRA2B-216ENST00000493864 VAMP1P23763 118 aa7.97□□□□□ -1.13
TRA2B-216ENST00000493864 YY1P25490 414 aa7.97□□□□□ -1.13
TRA2B-216ENST00000493864 PUM3Q15397 648 aaKnown RBP7.97□□□□□ -1.13
TRA2B-216ENST00000493864 GORABQ5T7V8 394 aa7.97□□□□□ -1.13
TRA2B-216ENST00000493864 SHISA2Q6UWI4 295 aa7.97□□□□□ -1.13
TRA2B-216ENST00000493864 TTLL6Q8N841 843 aa7.97□□□□□ -1.13
TRA2B-216ENST00000493864 LPIN2Q92539 896 aa7.97□□□□□ -1.13
TRA2B-216ENST00000493864 USP26Q9BXU7 913 aa7.97□□□□□ -1.13
TRA2B-216ENST00000493864 ECHDC1Q9NTX5 307 aa7.97□□□□□ -1.13
TRA2B-216ENST00000493864 SLX4Q8IY92 1834 aa7.96□□□□□ -1.13
TRA2B-216ENST00000493864 ENC1O14682 589 aa7.96□□□□□ -1.14
TRA2B-216ENST00000493864 MAP4K4O95819 1239 aaPredicted RBP7.96□□□□□ -1.14
TRA2B-216ENST00000493864 IFIT1P09914 478 aaKnown RBP7.96□□□□□ -1.14
TRA2B-216ENST00000493864 SLC5A1P13866 664 aa7.96□□□□□ -1.14
TRA2B-216ENST00000493864 ST13P50502 369 aaKnown RBP7.96□□□□□ -1.14
TRA2B-216ENST00000493864 UBE4AQ14139 1066 aa7.96□□□□□ -1.14
TRA2B-216ENST00000493864 LDLRAD1Q5T700 205 aa7.96□□□□□ -1.14
TRA2B-216ENST00000493864 PI4K2BQ8TCG2 481 aa7.96□□□□□ -1.14
TRA2B-216ENST00000493864 GPR101Q96P66 508 aaPredicted RBP7.96□□□□□ -1.14
TRA2B-216ENST00000493864 PIM2Q9P1W9 311 aa7.96□□□□□ -1.14
TRA2B-216ENST00000493864 LEMD3Q9Y2U8 911 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms