RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 PNMA2Q9UL42 364 aa15.9■□□□□ 0.14
PDCD11-206ENST00000493610 BRPF3Q9ULD4 1205 aa15.9■□□□□ 0.14
PDCD11-206ENST00000493610 FAM184BQ9ULE4 1060 aa15.9■□□□□ 0.14
PDCD11-206ENST00000493610 PHF24Q9UPV7 400 aa15.9■□□□□ 0.14
PDCD11-206ENST00000493610 SNX14Q9Y5W7 946 aa15.9■□□□□ 0.14
PDCD11-206ENST00000493610 ABCB11O95342 1321 aa15.9■□□□□ 0.14
PDCD11-206ENST00000493610 ERICH2A1L162 156 aa15.89■□□□□ 0.13
PDCD11-206ENST00000493610 DDAH1O94760 285 aa15.89■□□□□ 0.13
PDCD11-206ENST00000493610 SMPD1P17405 629 aa15.89■□□□□ 0.13
PDCD11-206ENST00000493610 SART3Q15020 963 aaKnown RBP15.89■□□□□ 0.13
PDCD11-206ENST00000493610 EEPD1Q7L9B9 569 aa15.89■□□□□ 0.13
PDCD11-206ENST00000493610 SRBD1Q8N5C6 995 aaKnown RBP15.89■□□□□ 0.13
PDCD11-206ENST00000493610 ARRDC4Q8NCT1 418 aa15.89■□□□□ 0.13
PDCD11-206ENST00000493610 TAAR1Q96RJ0 339 aa15.89■□□□□ 0.13
PDCD11-206ENST00000493610 RBM47A0AV96 593 aaKnown RBP15.88■□□□□ 0.13
PDCD11-206ENST00000493610 EVI5O60447 810 aa15.88■□□□□ 0.13
PDCD11-206ENST00000493610 CST5P28325 142 aaPredicted RBP15.88■□□□□ 0.13
PDCD11-206ENST00000493610 HSD17B4P51659 736 aa15.88■□□□□ 0.13
PDCD11-206ENST00000493610 GJA9P57773 515 aa15.88■□□□□ 0.13
PDCD11-206ENST00000493610 CASC1Q6TDU7 716 aa15.88■□□□□ 0.13
PDCD11-206ENST00000493610 SLC39A5Q6ZMH5 540 aa15.88■□□□□ 0.13
PDCD11-206ENST00000493610 DHX32Q7L7V1 743 aaKnown RBP15.88■□□□□ 0.13
PDCD11-206ENST00000493610 CATIPQ7Z7H3 387 aa15.88■□□□□ 0.13
PDCD11-206ENST00000493610 C7orf61Q8IZ16 206 aa15.88■□□□□ 0.13
PDCD11-206ENST00000493610 CMTR1Q8N1G2 835 aaKnown RBP15.88■□□□□ 0.13
PDCD11-206ENST00000493610 NUP133Q8WUM0 1156 aa15.88■□□□□ 0.13
PDCD11-206ENST00000493610 SPZ1Q9BXG8 430 aa15.88■□□□□ 0.13
PDCD11-206ENST00000493610 AMNQ9BXJ7 453 aa15.88■□□□□ 0.13
PDCD11-206ENST00000493610 MAF1Q9H063 256 aa15.88■□□□□ 0.13
PDCD11-206ENST00000493610 FAM217BQ9NTX9 383 aaPredicted RBP15.88■□□□□ 0.13
PDCD11-206ENST00000493610 COLQQ9Y215 455 aaPredicted RBP15.88■□□□□ 0.13
PDCD11-206ENST00000493610 LTBP2Q14767 1821 aa15.87■□□□□ 0.13
PDCD11-206ENST00000493610 LOC102724159A0A0B4J2E5 919 aa15.87■□□□□ 0.13
PDCD11-206ENST00000493610 ATN1P54259 1190 aaPredicted RBP15.87■□□□□ 0.13
PDCD11-206ENST00000493610 FUT2Q10981 343 aa15.87■□□□□ 0.13
PDCD11-206ENST00000493610 PWP2Q15269 919 aaKnown RBP15.87■□□□□ 0.13
PDCD11-206ENST00000493610 RNF20Q5VTR2 975 aa15.87■□□□□ 0.13
PDCD11-206ENST00000493610 APOA5Q6Q788 366 aa15.87■□□□□ 0.13
PDCD11-206ENST00000493610 DNERQ8NFT8 737 aa15.87■□□□□ 0.13
PDCD11-206ENST00000493610 FERMT2Q96AC1 680 aa15.87■□□□□ 0.13
PDCD11-206ENST00000493610 USP26Q9BXU7 913 aa15.87■□□□□ 0.13
PDCD11-206ENST00000493610 VTA1Q9NP79 307 aa15.87■□□□□ 0.13
PDCD11-206ENST00000493610 ZMYND8Q9ULU4 1186 aaPredicted RBP15.87■□□□□ 0.13
PDCD11-206ENST00000493610 MRPL11Q9Y3B7 192 aaKnown RBP15.87■□□□□ 0.13
PDCD11-206ENST00000493610 KIAA1217Q5T5P2 1943 aa15.86■□□□□ 0.13
PDCD11-206ENST00000493610 PNMA6FA0A0J9YX94 578 aa15.86■□□□□ 0.13
PDCD11-206ENST00000493610 A0A1W2PQ45 241 aaPredicted RBP15.86■□□□□ 0.13
PDCD11-206ENST00000493610 A0A1W2PQY0 241 aa15.86■□□□□ 0.13
PDCD11-206ENST00000493610 DHX16O60231 1041 aaKnown RBP15.86■□□□□ 0.13
PDCD11-206ENST00000493610 SMARCA1P28370 1054 aa15.86■□□□□ 0.13
PDCD11-206ENST00000493610 TNFAIP2Q03169 654 aa15.86■□□□□ 0.13
PDCD11-206ENST00000493610 KCNA10Q16322 511 aa15.86■□□□□ 0.13
PDCD11-206ENST00000493610 HOMER1Q86YM7 354 aa15.86■□□□□ 0.13
PDCD11-206ENST00000493610 TMTC2Q8N394 836 aa15.86■□□□□ 0.13
PDCD11-206ENST00000493610 ADD3Q9UEY8 706 aaKnown RBP15.86■□□□□ 0.13
PDCD11-206ENST00000493610 PCDHA1Q9Y5I3 950 aa15.86■□□□□ 0.13
PDCD11-206ENST00000493610 KBTBD13C9JR72 458 aa15.85■□□□□ 0.13
PDCD11-206ENST00000493610 ARIH2O95376 493 aa15.85■□□□□ 0.13
PDCD11-206ENST00000493610 SYN1P17600 705 aa15.85■□□□□ 0.13
PDCD11-206ENST00000493610 ACLYP53396 1101 aa15.85■□□□□ 0.13
PDCD11-206ENST00000493610 RTP1P59025 263 aa15.85■□□□□ 0.13
PDCD11-206ENST00000493610 BEX3Q00994 111 aa15.85■□□□□ 0.13
PDCD11-206ENST00000493610 C1orf53Q5VUE5 145 aa15.85■□□□□ 0.13
PDCD11-206ENST00000493610 IQSEC1Q6DN90 963 aa15.85■□□□□ 0.13
PDCD11-206ENST00000493610 TMTC3Q6ZXV5 915 aa15.85■□□□□ 0.13
PDCD11-206ENST00000493610 FANCBQ8NB91 859 aa15.85■□□□□ 0.13
PDCD11-206ENST00000493610 GDF15Q99988 308 aa15.85■□□□□ 0.13
PDCD11-206ENST00000493610 TSEN34Q9BSV6 310 aaKnown RBP15.85■□□□□ 0.13
PDCD11-206ENST00000493610 AGXT2Q9BYV1 514 aa15.85■□□□□ 0.13
PDCD11-206ENST00000493610 NR2E3Q9Y5X4 410 aa15.85■□□□□ 0.13
PDCD11-206ENST00000493610 RANBP2P49792 3224 aaKnown RBP15.85■□□□□ 0.13
PDCD11-206ENST00000493610 CCDC69A6NI79 296 aa15.84■□□□□ 0.13
PDCD11-206ENST00000493610 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
PDCD11-206ENST00000493610 CDC27P30260 824 aa15.84■□□□□ 0.13
PDCD11-206ENST00000493610 HOXA13P31271 388 aaPredicted RBP15.84■□□□□ 0.13
PDCD11-206ENST00000493610 TRIM60Q495X7 471 aa15.84■□□□□ 0.13
PDCD11-206ENST00000493610 DUSP28Q4G0W2 176 aa15.84■□□□□ 0.13
PDCD11-206ENST00000493610 HABP4Q5JVS0 413 aaKnown RBP15.84■□□□□ 0.13
PDCD11-206ENST00000493610 CCDC62Q6P9F0 684 aa15.84■□□□□ 0.13
PDCD11-206ENST00000493610 CHRDL2Q6WN34 429 aa15.84■□□□□ 0.13
PDCD11-206ENST00000493610 NFXL1Q6ZNB6 911 aa15.84■□□□□ 0.13
PDCD11-206ENST00000493610 RNF180Q86T96 592 aa15.84■□□□□ 0.13
PDCD11-206ENST00000493610 IL31RAQ8NI17 732 aa15.84■□□□□ 0.13
PDCD11-206ENST00000493610 PIBF1Q8WXW3 757 aa15.84■□□□□ 0.13
PDCD11-206ENST00000493610 RBM27Q9P2N5 1060 aaKnown RBP15.84■□□□□ 0.13
PDCD11-206ENST00000493610 hCG_1642624A0A1W2PR95 340 aa15.83■□□□□ 0.12
PDCD11-206ENST00000493610 EPB41L2O43491 1005 aaKnown RBP15.83■□□□□ 0.12
PDCD11-206ENST00000493610 RGS20O76081 388 aa15.83■□□□□ 0.12
PDCD11-206ENST00000493610 CFBP00751 764 aa15.83■□□□□ 0.12
PDCD11-206ENST00000493610 ASGR1P07306 291 aa15.83■□□□□ 0.12
PDCD11-206ENST00000493610 C6orf222P0C671 652 aaPredicted RBP15.83■□□□□ 0.12
PDCD11-206ENST00000493610 KRT32Q14532 448 aa15.83■□□□□ 0.12
PDCD11-206ENST00000493610 SH3RF1Q7Z6J0 888 aa15.83■□□□□ 0.12
PDCD11-206ENST00000493610 TLK2Q86UE8 772 aa15.83■□□□□ 0.12
PDCD11-206ENST00000493610 MICU3Q86XE3 530 aa15.83■□□□□ 0.12
PDCD11-206ENST00000493610 MCF2L2Q86YR7 1114 aa15.83■□□□□ 0.12
PDCD11-206ENST00000493610 FBXL16Q8N461 479 aa15.83■□□□□ 0.12
PDCD11-206ENST00000493610 CTCFLQ8NI51 663 aaPredicted RBP15.83■□□□□ 0.12
PDCD11-206ENST00000493610 COPS5Q92905 334 aa15.83■□□□□ 0.12
PDCD11-206ENST00000493610 JAKMIP1Q96N16 626 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms