RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 NAP1L2Q9ULW6 460 aaPredicted RBP10.97□□□□□ -0.65
SGIP1-213ENST00000493564 MRPL11Q9Y3B7 192 aaKnown RBP10.97□□□□□ -0.65
SGIP1-213ENST00000493564 PCDHA1Q9Y5I3 950 aa10.97□□□□□ -0.65
SGIP1-213ENST00000493564 SNX14Q9Y5W7 946 aa10.97□□□□□ -0.65
SGIP1-213ENST00000493564 SLC12A7Q9Y666 1083 aa10.97□□□□□ -0.65
SGIP1-213ENST00000493564 ABCB11O95342 1321 aa10.97□□□□□ -0.65
SGIP1-213ENST00000493564 CEP290O15078 2479 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 MCM3APO60318 1980 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 hCG_1642624A0A1W2PR95 340 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 MYADML2A6NDP7 307 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 KBTBD13C9JR72 458 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 DNM1LO00429 736 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 ZBTB5O15062 677 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 REC8O95072 547 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 COL6A1P12109 1028 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 LIFRP42702 1097 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 FGD1P98174 961 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 KRT32Q14532 448 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 LRRC26Q2I0M4 334 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 SRBD1Q8N5C6 995 aaKnown RBP10.96□□□□□ -0.65
SGIP1-213ENST00000493564 FANCBQ8NB91 859 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 MTA3Q9BTC8 594 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 COL20A1Q9P218 1284 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 ADD3Q9UEY8 706 aaKnown RBP10.96□□□□□ -0.65
SGIP1-213ENST00000493564 PNMA2Q9UL42 364 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 NR2E3Q9Y5X4 410 aa10.96□□□□□ -0.65
SGIP1-213ENST00000493564 PNMA6FA0A0J9YX94 578 aa10.95□□□□□ -0.66
SGIP1-213ENST00000493564 DUSP11O75319 330 aaKnown RBP10.95□□□□□ -0.66
SGIP1-213ENST00000493564 DDAH1O94760 285 aa10.95□□□□□ -0.66
SGIP1-213ENST00000493564 SMPD1P17405 629 aa10.95□□□□□ -0.66
SGIP1-213ENST00000493564 SYN1P17600 705 aa10.95□□□□□ -0.66
SGIP1-213ENST00000493564 HOXA13P31271 388 aaPredicted RBP10.95□□□□□ -0.66
SGIP1-213ENST00000493564 KIF5BP33176 963 aa10.95□□□□□ -0.66
SGIP1-213ENST00000493564 BEX3Q00994 111 aa10.95□□□□□ -0.66
SGIP1-213ENST00000493564 TNFAIP2Q03169 654 aa10.95□□□□□ -0.66
SGIP1-213ENST00000493564 KCNA10Q16322 511 aa10.95□□□□□ -0.66
SGIP1-213ENST00000493564 TAPT1Q6NXT6 567 aa10.95□□□□□ -0.66
SGIP1-213ENST00000493564 SYNE3Q6ZMZ3 975 aa10.95□□□□□ -0.66
SGIP1-213ENST00000493564 RNF180Q86T96 592 aa10.95□□□□□ -0.66
SGIP1-213ENST00000493564 MICU3Q86XE3 530 aa10.95□□□□□ -0.66
SGIP1-213ENST00000493564 MCF2L2Q86YR7 1114 aa10.95□□□□□ -0.66
SGIP1-213ENST00000493564 RGS22Q8NE09 1264 aa10.95□□□□□ -0.66
SGIP1-213ENST00000493564 SYTL5Q8TDW5 730 aaPredicted RBP10.95□□□□□ -0.66
SGIP1-213ENST00000493564 KCNB2Q92953 911 aa10.95□□□□□ -0.66
SGIP1-213ENST00000493564 USP26Q9BXU7 913 aa10.95□□□□□ -0.66
SGIP1-213ENST00000493564 ZMYND8Q9ULU4 1186 aaPredicted RBP10.95□□□□□ -0.66
SGIP1-213ENST00000493564 SYNRGQ9UMZ2 1314 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 KLF18A0A0U1RQI7 1052 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 OPLAHO14841 1288 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 DYNC1LI2O43237 492 aaPredicted RBP10.94□□□□□ -0.66
SGIP1-213ENST00000493564 ADAMTS4O75173 837 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 C6orf222P0C671 652 aaPredicted RBP10.94□□□□□ -0.66
SGIP1-213ENST00000493564 CALM1P0DP23 149 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 CALM2P0DP24 149 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 CALM3P0DP25 149 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 EIF2AK2P19525 551 aaKnown RBP10.94□□□□□ -0.66
SGIP1-213ENST00000493564 PDE4DQ08499 809 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 APOBRQ0VD83 1088 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 GNASQ5JWF2 1037 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 BLOC1S2Q6QNY1 142 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 SLC39A5Q6ZMH5 540 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 Q6ZUG5 572 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 FCHSD1Q86WN1 690 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 MORC4Q8TE76 937 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 RRP36Q96EU6 259 aaKnown RBP10.94□□□□□ -0.66
SGIP1-213ENST00000493564 ZFP91Q96JP5 570 aaPredicted RBP10.94□□□□□ -0.66
SGIP1-213ENST00000493564 RMDN3Q96TC7 470 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 MAP3K14Q99558 947 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 WDR11Q9BZH6 1224 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 ATP11BQ9Y2G3 1177 aa10.94□□□□□ -0.66
SGIP1-213ENST00000493564 DNAH12Q6ZR08 3092 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 ZBTB43O43298 467 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 HMGB1P09429 215 aaKnown RBP10.93□□□□□ -0.66
SGIP1-213ENST00000493564 CASTP20810 708 aaKnown RBP10.93□□□□□ -0.66
SGIP1-213ENST00000493564 GNAQP50148 359 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 ACLYP53396 1101 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 ARHGEF16Q5VV41 709 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 IQSEC1Q6DN90 963 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 APOA5Q6Q788 366 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 CHRDL2Q6WN34 429 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 SEPT14Q6ZU15 432 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 SGMS1Q86VZ5 419 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 KLHDC9Q8NEP7 349 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 BRF1Q92994 677 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 VTI1AQ96AJ9 217 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 LZTS2Q9BRK4 669 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 LARP6Q9BRS8 491 aaKnown RBP10.93□□□□□ -0.66
SGIP1-213ENST00000493564 SPZ1Q9BXG8 430 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 SPC25Q9HBM1 224 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 VTA1Q9NP79 307 aa10.93□□□□□ -0.66
SGIP1-213ENST00000493564 COLQQ9Y215 455 aaPredicted RBP10.93□□□□□ -0.66
SGIP1-213ENST00000493564 GNEQ9Y223 722 aaKnown RBP10.93□□□□□ -0.66
SGIP1-213ENST00000493564 LCTP09848 1927 aa10.92□□□□□ -0.66
SGIP1-213ENST00000493564 MYH6P13533 1939 aa10.92□□□□□ -0.66
SGIP1-213ENST00000493564 A0A1W2PQ45 241 aaPredicted RBP10.92□□□□□ -0.66
SGIP1-213ENST00000493564 A0A1W2PQY0 241 aa10.92□□□□□ -0.66
SGIP1-213ENST00000493564 GCOM1H8Y6P7 765 aaPredicted RBP10.92□□□□□ -0.66
SGIP1-213ENST00000493564 PPFIA3O75145 1194 aa10.92□□□□□ -0.66
SGIP1-213ENST00000493564 POLR2MP0CAP2 368 aa10.92□□□□□ -0.66
SGIP1-213ENST00000493564 MYCLP12524 364 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms