RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 FAM83GA6ND36 823 aa6.46□□□□□ -1.38
CLIP4-212ENST00000493551 ABLIM1O14639 778 aa6.46□□□□□ -1.38
CLIP4-212ENST00000493551 SUV39H1O43463 412 aa6.46□□□□□ -1.38
CLIP4-212ENST00000493551 NRDCO43847 1150 aa6.46□□□□□ -1.38
CLIP4-212ENST00000493551 CDR1P51861 262 aa6.46□□□□□ -1.38
CLIP4-212ENST00000493551 RPS26P62854 115 aaKnown RBP6.46□□□□□ -1.38
CLIP4-212ENST00000493551 YBX1P67809 324 aaKnown RBP6.46□□□□□ -1.38
CLIP4-212ENST00000493551 VPS72Q15906 364 aa6.46□□□□□ -1.38
CLIP4-212ENST00000493551 RGL3Q3MIN7 710 aa6.46□□□□□ -1.38
CLIP4-212ENST00000493551 HHIPL2Q6UWX4 724 aa6.46□□□□□ -1.38
CLIP4-212ENST00000493551 PMFBP1Q8TBY8 1022 aa6.46□□□□□ -1.38
CLIP4-212ENST00000493551 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.46□□□□□ -1.38
CLIP4-212ENST00000493551 FAM8A1Q9UBU6 413 aa6.46□□□□□ -1.38
CLIP4-212ENST00000493551 PPP1R1BQ9UD71 204 aaPredicted RBP6.46□□□□□ -1.38
CLIP4-212ENST00000493551 DCTN4Q9UJW0 460 aa6.46□□□□□ -1.38
CLIP4-212ENST00000493551 PALD1Q9ULE6 856 aa6.46□□□□□ -1.38
CLIP4-212ENST00000493551 CDC42BPGQ6DT37 1551 aa6.45□□□□□ -1.38
CLIP4-212ENST00000493551 HFM1A2PYH4 1435 aa6.45□□□□□ -1.38
CLIP4-212ENST00000493551 USP2O75604 605 aaPredicted RBP6.45□□□□□ -1.38
CLIP4-212ENST00000493551 SEPT6Q14141 434 aa6.45□□□□□ -1.38
CLIP4-212ENST00000493551 RTP5Q14D33 572 aa6.45□□□□□ -1.38
CLIP4-212ENST00000493551 ACSF2Q96CM8 615 aaPredicted RBP6.45□□□□□ -1.38
CLIP4-212ENST00000493551 BTG4Q9NY30 223 aa6.45□□□□□ -1.38
CLIP4-212ENST00000493551 USP35Q9P2H5 1018 aa6.45□□□□□ -1.38
CLIP4-212ENST00000493551 ADGRF5Q8IZF2 1346 aa6.45□□□□□ -1.38
CLIP4-212ENST00000493551 LRPPRCP42704 1394 aaKnown RBP6.44□□□□□ -1.38
CLIP4-212ENST00000493551 TNS3Q68CZ2 1445 aa6.44□□□□□ -1.38
CLIP4-212ENST00000493551 KIF1BO60333 1816 aa6.44□□□□□ -1.38
CLIP4-212ENST00000493551 USP17L7P0C7H9 530 aa6.44□□□□□ -1.38
CLIP4-212ENST00000493551 KIR2DL1P43626 348 aaPredicted RBP6.44□□□□□ -1.38
CLIP4-212ENST00000493551 KIR2DL2P43627 348 aaPredicted RBP6.44□□□□□ -1.38
CLIP4-212ENST00000493551 SLC14A2Q15849 920 aa6.44□□□□□ -1.38
CLIP4-212ENST00000493551 C12orf49Q9H741 205 aa6.44□□□□□ -1.38
CLIP4-212ENST00000493551 TTF2Q9UNY4 1162 aaKnown RBP6.44□□□□□ -1.38
CLIP4-212ENST00000493551 SPG7Q9UQ90 795 aa6.44□□□□□ -1.38
CLIP4-212ENST00000493551 ROCK1Q13464 1354 aa6.44□□□□□ -1.38
CLIP4-212ENST00000493551 CCDC144AA2RUR9 1427 aa6.43□□□□□ -1.38
CLIP4-212ENST00000493551 CAMTA1Q9Y6Y1 1673 aa6.43□□□□□ -1.38
CLIP4-212ENST00000493551 ABCA3Q99758 1704 aa6.43□□□□□ -1.38
CLIP4-212ENST00000493551 K7ESM1 405 aa6.43□□□□□ -1.38
CLIP4-212ENST00000493551 AKAP8O43823 692 aaKnown RBP6.43□□□□□ -1.38
CLIP4-212ENST00000493551 LRRN2O75325 713 aa6.43□□□□□ -1.38
CLIP4-212ENST00000493551 PNLIPP16233 465 aa6.43□□□□□ -1.38
CLIP4-212ENST00000493551 CHRNA2Q15822 529 aa6.43□□□□□ -1.38
CLIP4-212ENST00000493551 CLEC16AQ2KHT3 1053 aa6.43□□□□□ -1.38
CLIP4-212ENST00000493551 ALG1LQ6GMV1 187 aa6.43□□□□□ -1.38
CLIP4-212ENST00000493551 PWWP2AQ96N64 755 aa6.43□□□□□ -1.38
CLIP4-212ENST00000493551 PCDHB5Q9Y5E4 795 aa6.43□□□□□ -1.38
CLIP4-212ENST00000493551 FMN2Q9NZ56 1722 aa6.42□□□□□ -1.38
CLIP4-212ENST00000493551 RGPD8O14715 1765 aaPredicted RBP6.42□□□□□ -1.38
CLIP4-212ENST00000493551 SHISA3A0PJX4 238 aa6.42□□□□□ -1.38
CLIP4-212ENST00000493551 RPL10P27635 214 aaKnown RBP6.42□□□□□ -1.38
CLIP4-212ENST00000493551 ZNF827Q17R98 1081 aa6.42□□□□□ -1.38
CLIP4-212ENST00000493551 ZFYVE27Q5T4F4 411 aa6.42□□□□□ -1.38
CLIP4-212ENST00000493551 RNF111Q6ZNA4 994 aa6.42□□□□□ -1.38
CLIP4-212ENST00000493551 CEP128Q6ZU80 1094 aa6.42□□□□□ -1.38
CLIP4-212ENST00000493551 IGDCC3Q8IVU1 814 aa6.42□□□□□ -1.38
CLIP4-212ENST00000493551 TP53I13Q8NBR0 393 aaPredicted RBP6.42□□□□□ -1.38
CLIP4-212ENST00000493551 CRELD1Q96HD1 420 aa6.42□□□□□ -1.38
CLIP4-212ENST00000493551 MAP6Q96JE9 813 aa6.42□□□□□ -1.38
CLIP4-212ENST00000493551 HIRIP3Q9BW71 556 aaPredicted RBP6.42□□□□□ -1.38
CLIP4-212ENST00000493551 ASPNQ9BXN1 380 aa6.42□□□□□ -1.38
CLIP4-212ENST00000493551 ZMYM5Q9UJ78 669 aa6.42□□□□□ -1.38
CLIP4-212ENST00000493551 RGPD1P0DJD0 1748 aa6.42□□□□□ -1.38
CLIP4-212ENST00000493551 NRAPQ86VF7 1730 aa6.42□□□□□ -1.38
CLIP4-212ENST00000493551 TNS1Q9HBL0 1735 aaKnown RBP6.42□□□□□ -1.38
CLIP4-212ENST00000493551 ZBTB7CA1YPR0 619 aa6.41□□□□□ -1.38
CLIP4-212ENST00000493551 PRICKLE3O43900 615 aaPredicted RBP6.41□□□□□ -1.38
CLIP4-212ENST00000493551 KCNC1P48547 511 aa6.41□□□□□ -1.38
CLIP4-212ENST00000493551 YARSP54577 528 aaKnown RBP6.41□□□□□ -1.38
CLIP4-212ENST00000493551 ERVFRD-1P60508 538 aa6.41□□□□□ -1.38
CLIP4-212ENST00000493551 CAP1Q01518 475 aa6.41□□□□□ -1.38
CLIP4-212ENST00000493551 FAM13CQ8NE31 585 aa6.41□□□□□ -1.38
CLIP4-212ENST00000493551 SETDB2Q96T68 719 aa6.41□□□□□ -1.38
CLIP4-212ENST00000493551 MIR1-1HGQ9H1L0 117 aa6.41□□□□□ -1.38
CLIP4-212ENST00000493551 KIF1AQ12756 1690 aa6.41□□□□□ -1.38
CLIP4-212ENST00000493551 PPLO60437 1756 aa6.41□□□□□ -1.38
CLIP4-212ENST00000493551 IFT172Q9UG01 1749 aa6.4□□□□□ -1.38
CLIP4-212ENST00000493551 NWD2Q9ULI1 1742 aa6.4□□□□□ -1.38
CLIP4-212ENST00000493551 SOWAHDA6NJG2 315 aa6.4□□□□□ -1.38
CLIP4-212ENST00000493551 SDHBP21912 280 aa6.4□□□□□ -1.38
CLIP4-212ENST00000493551 MAPK8P45983 427 aa6.4□□□□□ -1.38
CLIP4-212ENST00000493551 ZXDAP98168 799 aa6.4□□□□□ -1.38
CLIP4-212ENST00000493551 RPL6Q02878 288 aaKnown RBP6.4□□□□□ -1.38
CLIP4-212ENST00000493551 TMEM62Q0P6H9 643 aa6.4□□□□□ -1.38
CLIP4-212ENST00000493551 LDHDQ86WU2 507 aa6.4□□□□□ -1.38
CLIP4-212ENST00000493551 ENOX1Q8TC92 643 aaKnown RBP6.4□□□□□ -1.38
CLIP4-212ENST00000493551 PRAM1Q96QH2 718 aa6.4□□□□□ -1.38
CLIP4-212ENST00000493551 CAMKK2Q96RR4 588 aa6.4□□□□□ -1.38
CLIP4-212ENST00000493551 PRDM11Q9NQV5 511 aa6.4□□□□□ -1.38
CLIP4-212ENST00000493551 SPATA31A5Q5VU36 1347 aa6.4□□□□□ -1.39
CLIP4-212ENST00000493551 SPATA31A7Q8IWB4 1347 aa6.4□□□□□ -1.39
CLIP4-212ENST00000493551 RRBP1Q9P2E9 1410 aaKnown RBP6.4□□□□□ -1.39
CLIP4-212ENST00000493551 ZBTB7AO95365 584 aa6.39□□□□□ -1.39
CLIP4-212ENST00000493551 MPOP05164 745 aa6.39□□□□□ -1.39
CLIP4-212ENST00000493551 TNFRSF1AP19438 455 aa6.39□□□□□ -1.39
CLIP4-212ENST00000493551 TNNI2P48788 182 aa6.39□□□□□ -1.39
CLIP4-212ENST00000493551 ZC3H6P61129 1189 aaKnown RBP6.39□□□□□ -1.39
CLIP4-212ENST00000493551 TSNAXIP1Q2TAA8 658 aa6.39□□□□□ -1.39
CLIP4-212ENST00000493551 AGMOQ6ZNB7 445 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms