RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 HCFC2Q9Y5Z7 792 aa5.45□□□□□ -1.54
PTCD3-218ENST00000493430 ADAMTS20P59510 1910 aa5.44□□□□□ -1.54
PTCD3-218ENST00000493430 ZC3H12DA2A288 527 aaKnown RBP5.44□□□□□ -1.54
PTCD3-218ENST00000493430 AURKAO14965 403 aa5.44□□□□□ -1.54
PTCD3-218ENST00000493430 PPM1BO75688 479 aa5.44□□□□□ -1.54
PTCD3-218ENST00000493430 CELA3BP08861 270 aa5.44□□□□□ -1.54
PTCD3-218ENST00000493430 NCAM1P13591 858 aa5.44□□□□□ -1.54
PTCD3-218ENST00000493430 ATF2P15336 505 aa5.44□□□□□ -1.54
PTCD3-218ENST00000493430 FBLN1P23142 703 aa5.44□□□□□ -1.54
PTCD3-218ENST00000493430 SOX9P48436 509 aa5.44□□□□□ -1.54
PTCD3-218ENST00000493430 KCNC1P48547 511 aa5.44□□□□□ -1.54
PTCD3-218ENST00000493430 SLC7A5Q01650 507 aa5.44□□□□□ -1.54
PTCD3-218ENST00000493430 PRDM2Q13029 1718 aa5.44□□□□□ -1.54
PTCD3-218ENST00000493430 FRMD5Q7Z6J6 570 aa5.44□□□□□ -1.54
PTCD3-218ENST00000493430 C19orf47Q8N9M1 422 aaKnown RBP5.44□□□□□ -1.54
PTCD3-218ENST00000493430 OR6P1Q8NGX9 317 aa5.44□□□□□ -1.54
PTCD3-218ENST00000493430 SUSD2Q9UGT4 822 aa5.44□□□□□ -1.54
PTCD3-218ENST00000493430 GLI4P10075 376 aa5.43□□□□□ -1.54
PTCD3-218ENST00000493430 GIPRP48546 466 aa5.43□□□□□ -1.54
PTCD3-218ENST00000493430 SEPHS1P49903 392 aa5.43□□□□□ -1.54
PTCD3-218ENST00000493430 SLURP1P55000 103 aa5.43□□□□□ -1.54
PTCD3-218ENST00000493430 SKOR2Q2VWA4 1001 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-218ENST00000493430 LZTR1Q8N653 840 aa5.43□□□□□ -1.54
PTCD3-218ENST00000493430 MCMBPQ9BTE3 642 aa5.43□□□□□ -1.54
PTCD3-218ENST00000493430 KLHL25Q9H0H3 589 aa5.43□□□□□ -1.54
PTCD3-218ENST00000493430 PCDHB10Q9UN67 800 aa5.43□□□□□ -1.54
PTCD3-218ENST00000493430 A0A1W2PQH9 124 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 C2orf71A6NGG8 1288 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 STXBP3O00186 592 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 VAMP4O75379 141 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 EPHX1P07099 455 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 ASGR2P07307 311 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 VAMP1P23763 118 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 MFAP1P55081 439 aaKnown RBP5.42□□□□□ -1.54
PTCD3-218ENST00000493430 DPY19L1Q2PZI1 675 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 PRRT2Q7Z6L0 340 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-218ENST00000493430 ARHGEF39Q8N4T4 335 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 FNIP1Q8TF40 1166 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 ALG3Q92685 438 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 GPRASP2Q96D09 838 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 RCC1LQ96I51 464 aaKnown RBP5.42□□□□□ -1.54
PTCD3-218ENST00000493430 FGD4Q96M96 766 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 ADAM7Q9H2U9 754 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 PLA2G2DQ9UNK4 145 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 BACE2Q9Y5Z0 518 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 PMF1-BGLAPU3KQ54 211 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 SMARCA2P51531 1590 aa5.42□□□□□ -1.54
PTCD3-218ENST00000493430 THOC2Q8NI27 1593 aaKnown RBP5.42□□□□□ -1.54
PTCD3-218ENST00000493430 TRBV23OR9-2A0A075B6M9 112 aa5.41□□□□□ -1.54
PTCD3-218ENST00000493430 RECKO95980 971 aa5.41□□□□□ -1.54
PTCD3-218ENST00000493430 PLA2G1BP04054 148 aaKnown RBP5.41□□□□□ -1.54
PTCD3-218ENST00000493430 PAMP19021 973 aa5.41□□□□□ -1.54
PTCD3-218ENST00000493430 RBM10P98175 930 aaKnown RBP5.41□□□□□ -1.54
PTCD3-218ENST00000493430 AMPD2Q01433 879 aa5.41□□□□□ -1.54
PTCD3-218ENST00000493430 GRB10Q13322 594 aa5.41□□□□□ -1.54
PTCD3-218ENST00000493430 SLC9A5Q14940 896 aa5.41□□□□□ -1.54
PTCD3-218ENST00000493430 PPP2R5EQ16537 467 aa5.41□□□□□ -1.54
PTCD3-218ENST00000493430 VWA3BQ502W6 1294 aa5.41□□□□□ -1.54
PTCD3-218ENST00000493430 DBX2Q6ZNG2 339 aa5.41□□□□□ -1.54
PTCD3-218ENST00000493430 SAPCD2Q86UD0 394 aa5.41□□□□□ -1.54
PTCD3-218ENST00000493430 METTL16Q86W50 562 aaKnown RBP5.41□□□□□ -1.54
PTCD3-218ENST00000493430 RASGRP4Q8TDF6 673 aa5.41□□□□□ -1.54
PTCD3-218ENST00000493430 TSPAN17Q96FV3 270 aa5.41□□□□□ -1.54
PTCD3-218ENST00000493430 PEX11GQ96HA9 241 aa5.41□□□□□ -1.54
PTCD3-218ENST00000493430 CGGBP1Q9UFW8 167 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-218ENST00000493430 NUDT5Q9UKK9 219 aa5.41□□□□□ -1.54
PTCD3-218ENST00000493430 SUGT1Q9Y2Z0 365 aa5.41□□□□□ -1.54
PTCD3-218ENST00000493430 RWDD3Q9Y3V2 267 aa5.41□□□□□ -1.54
PTCD3-218ENST00000493430 NPHP3-ACAD11A0A0J9YXS1 232 aa5.4□□□□□ -1.54
PTCD3-218ENST00000493430 HTRA3P83110 453 aa5.4□□□□□ -1.54
PTCD3-218ENST00000493430 TRIM26Q12899 539 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-218ENST00000493430 LIPIQ6XZB0 460 aa5.4□□□□□ -1.54
PTCD3-218ENST00000493430 B3GNT8Q7Z7M8 397 aa5.4□□□□□ -1.54
PTCD3-218ENST00000493430 CPNE8Q86YQ8 564 aa5.4□□□□□ -1.54
PTCD3-218ENST00000493430 NETO2Q8NC67 525 aa5.4□□□□□ -1.54
PTCD3-218ENST00000493430 USP33Q8TEY7 942 aa5.4□□□□□ -1.54
PTCD3-218ENST00000493430 KLHL6Q8WZ60 621 aa5.4□□□□□ -1.54
PTCD3-218ENST00000493430 KRTAP4-5Q9BYR2 181 aa5.4□□□□□ -1.54
PTCD3-218ENST00000493430 RXFP1Q9HBX9 757 aa5.4□□□□□ -1.54
PTCD3-218ENST00000493430 ATAD2BQ9ULI0 1458 aa5.39□□□□□ -1.55
PTCD3-218ENST00000493430 BAZ1AQ9NRL2 1556 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-218ENST00000493430 SH3D21A4FU49 640 aa5.39□□□□□ -1.55
PTCD3-218ENST00000493430 PPP1R11O60927 126 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-218ENST00000493430 ZBTB7AO95365 584 aa5.39□□□□□ -1.55
PTCD3-218ENST00000493430 PMLP29590 882 aa5.39□□□□□ -1.55
PTCD3-218ENST00000493430 MC3RP41968 323 aa5.39□□□□□ -1.55
PTCD3-218ENST00000493430 PLP2Q04941 152 aa5.39□□□□□ -1.55
PTCD3-218ENST00000493430 ZFYVE27Q5T4F4 411 aa5.39□□□□□ -1.55
PTCD3-218ENST00000493430 ADGRG2Q8IZP9 1017 aa5.39□□□□□ -1.55
PTCD3-218ENST00000493430 ZNF526Q8TF50 670 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-218ENST00000493430 CPLX3Q8WVH0 158 aa5.39□□□□□ -1.55
PTCD3-218ENST00000493430 CPA5Q8WXQ8 436 aa5.39□□□□□ -1.55
PTCD3-218ENST00000493430 MTA3Q9BTC8 594 aa5.39□□□□□ -1.55
PTCD3-218ENST00000493430 USP40Q9NVE5 1235 aa5.39□□□□□ -1.55
PTCD3-218ENST00000493430 GULP1Q9UBP9 304 aa5.39□□□□□ -1.55
PTCD3-218ENST00000493430 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-218ENST00000493430 HMGXB3Q12766 1538 aa5.38□□□□□ -1.55
PTCD3-218ENST00000493430 A0A1B0GTL3 188 aa5.38□□□□□ -1.55
PTCD3-218ENST00000493430 ANKRD34BA5PLL1 514 aa5.38□□□□□ -1.55
PTCD3-218ENST00000493430 NPHS1O60500 1241 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms