RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 PTPN18Q99952 460 aa5.73□□□□□ -1.49
SYCP1-208ENST00000493377 REV1Q9UBZ9 1251 aa5.73□□□□□ -1.49
SYCP1-208ENST00000493377 CYP1A1P04798 512 aaPredicted RBP5.72□□□□□ -1.49
SYCP1-208ENST00000493377 USP17L7P0C7H9 530 aa5.72□□□□□ -1.49
SYCP1-208ENST00000493377 POU4F1Q01851 419 aa5.72□□□□□ -1.49
SYCP1-208ENST00000493377 USP48Q86UV5 1035 aa5.72□□□□□ -1.49
SYCP1-208ENST00000493377 INO80B-WBP1J3KQ70 363 aa5.71□□□□□ -1.5
SYCP1-208ENST00000493377 SERPINB4P48594 390 aa5.71□□□□□ -1.5
SYCP1-208ENST00000493377 DGCR2P98153 550 aa5.71□□□□□ -1.5
SYCP1-208ENST00000493377 KBTBD2Q8IY47 623 aa5.71□□□□□ -1.5
SYCP1-208ENST00000493377 NETO2Q8NC67 525 aa5.71□□□□□ -1.5
SYCP1-208ENST00000493377 LARP4BQ92615 738 aaKnown RBP5.71□□□□□ -1.5
SYCP1-208ENST00000493377 EDAQ92838 391 aa5.71□□□□□ -1.5
SYCP1-208ENST00000493377 PRRX2Q99811 253 aa5.71□□□□□ -1.5
SYCP1-208ENST00000493377 BRIP1Q9BX63 1249 aa5.71□□□□□ -1.5
SYCP1-208ENST00000493377 INO80BQ9C086 356 aaPredicted RBP5.71□□□□□ -1.5
SYCP1-208ENST00000493377 C12orf49Q9H741 205 aa5.71□□□□□ -1.5
SYCP1-208ENST00000493377 MEIS1O00470 390 aa5.7□□□□□ -1.5
SYCP1-208ENST00000493377 U2SURPO15042 1029 aaKnown RBP5.7□□□□□ -1.5
SYCP1-208ENST00000493377 RAMP2O60895 175 aa5.7□□□□□ -1.5
SYCP1-208ENST00000493377 UBOX5O94941 541 aa5.7□□□□□ -1.5
SYCP1-208ENST00000493377 LIG3P49916 1009 aa5.7□□□□□ -1.5
SYCP1-208ENST00000493377 TMC7Q7Z402 723 aa5.7□□□□□ -1.5
SYCP1-208ENST00000493377 EXTL1Q92935 676 aa5.7□□□□□ -1.5
SYCP1-208ENST00000493377 ZNF764Q96H86 408 aaPredicted RBP5.7□□□□□ -1.5
SYCP1-208ENST00000493377 RXFP1Q9HBX9 757 aa5.7□□□□□ -1.5
SYCP1-208ENST00000493377 ZNF28P17035 718 aa5.69□□□□□ -1.5
SYCP1-208ENST00000493377 BMP5P22003 454 aa5.69□□□□□ -1.5
SYCP1-208ENST00000493377 RAD51AP2Q09MP3 1159 aa5.69□□□□□ -1.5
SYCP1-208ENST00000493377 DSC3Q14574 896 aa5.69□□□□□ -1.5
SYCP1-208ENST00000493377 CCDC85BQ15834 202 aaPredicted RBP5.69□□□□□ -1.5
SYCP1-208ENST00000493377 EPHA10Q5JZY3 1008 aa5.69□□□□□ -1.5
SYCP1-208ENST00000493377 CRTC3Q6UUV7 619 aa5.69□□□□□ -1.5
SYCP1-208ENST00000493377 TFE3P19532 575 aaPredicted RBP5.68□□□□□ -1.5
SYCP1-208ENST00000493377 ZNF362Q5T0B9 420 aaPredicted RBP5.68□□□□□ -1.5
SYCP1-208ENST00000493377 JARID2Q92833 1246 aaPredicted RBP5.68□□□□□ -1.5
SYCP1-208ENST00000493377 TMEM168Q9H0V1 697 aa5.68□□□□□ -1.5
SYCP1-208ENST00000493377 PRR13Q9NZ81 148 aa5.68□□□□□ -1.5
SYCP1-208ENST00000493377 BPNT1O95861 308 aa5.67□□□□□ -1.5
SYCP1-208ENST00000493377 GSNP06396 782 aa5.67□□□□□ -1.5
SYCP1-208ENST00000493377 GSTM1P09488 218 aa5.67□□□□□ -1.5
SYCP1-208ENST00000493377 MAKP20794 623 aa5.67□□□□□ -1.5
SYCP1-208ENST00000493377 ITGA1P56199 1179 aa5.67□□□□□ -1.5
SYCP1-208ENST00000493377 PRAMEF18Q5VWM3 479 aa5.67□□□□□ -1.5
SYCP1-208ENST00000493377 YTHDC1Q96MU7 727 aaKnown RBP5.67□□□□□ -1.5
SYCP1-208ENST00000493377 SPG7Q9UQ90 795 aa5.67□□□□□ -1.5
SYCP1-208ENST00000493377 COL10A1Q03692 680 aa5.66□□□□□ -1.5
SYCP1-208ENST00000493377 PAPD7Q5XG87 772 aaKnown RBP5.66□□□□□ -1.5
SYCP1-208ENST00000493377 CCDC84Q86UT8 332 aaPredicted RBP5.66□□□□□ -1.5
SYCP1-208ENST00000493377 CACTINQ8WUQ7 758 aaKnown RBP5.66□□□□□ -1.5
SYCP1-208ENST00000493377 GFOD1Q9NXC2 390 aa5.66□□□□□ -1.5
SYCP1-208ENST00000493377 FGF10O15520 208 aaPredicted RBP5.65□□□□□ -1.5
SYCP1-208ENST00000493377 FOXS1O43638 330 aa5.65□□□□□ -1.5
SYCP1-208ENST00000493377 B4GALT4O60513 344 aa5.65□□□□□ -1.5
SYCP1-208ENST00000493377 DNAJA2O60884 412 aa5.65□□□□□ -1.5
SYCP1-208ENST00000493377 HTR3BO95264 441 aa5.65□□□□□ -1.5
SYCP1-208ENST00000493377 L1CAMP32004 1257 aa5.65□□□□□ -1.5
SYCP1-208ENST00000493377 ETV3LQ6ZN32 361 aa5.65□□□□□ -1.5
SYCP1-208ENST00000493377 SLC12A9Q9BXP2 914 aa5.65□□□□□ -1.5
SYCP1-208ENST00000493377 SRRTQ9BXP5 876 aaKnown RBP5.65□□□□□ -1.5
SYCP1-208ENST00000493377 L2HGDHQ9H9P8 463 aa5.65□□□□□ -1.5
SYCP1-208ENST00000493377 PLSCR1O15162 318 aa5.64□□□□□ -1.51
SYCP1-208ENST00000493377 C1SP09871 688 aa5.64□□□□□ -1.51
SYCP1-208ENST00000493377 ADRA1BP35368 520 aa5.64□□□□□ -1.51
SYCP1-208ENST00000493377 ZNF483Q8TF39 744 aaPredicted RBP5.64□□□□□ -1.51
SYCP1-208ENST00000493377 SYT3Q9BQG1 590 aa5.64□□□□□ -1.51
SYCP1-208ENST00000493377 MMRN2Q9H8L6 949 aa5.64□□□□□ -1.51
SYCP1-208ENST00000493377 SEC61A2Q9H9S3 476 aa5.64□□□□□ -1.51
SYCP1-208ENST00000493377 A0A0A6YYK5 440 aaPredicted RBP5.63□□□□□ -1.51
SYCP1-208ENST00000493377 CTGFP29279 349 aa5.63□□□□□ -1.51
SYCP1-208ENST00000493377 TUBA3CQ13748 450 aa5.63□□□□□ -1.51
SYCP1-208ENST00000493377 TCTN3Q6NUS6 607 aa5.63□□□□□ -1.51
SYCP1-208ENST00000493377 TUBA3EQ6PEY2 450 aa5.63□□□□□ -1.51
SYCP1-208ENST00000493377 ZC3H18Q86VM9 953 aaKnown RBP5.63□□□□□ -1.51
SYCP1-208ENST00000493377 C1orf210Q8IVY1 113 aa5.63□□□□□ -1.51
SYCP1-208ENST00000493377 RGS22Q8NE09 1264 aa5.63□□□□□ -1.51
SYCP1-208ENST00000493377 PLEKHG4BQ96PX9 1271 aa5.63□□□□□ -1.51
SYCP1-208ENST00000493377 ADARB2Q9NS39 739 aaKnown RBP5.63□□□□□ -1.51
SYCP1-208ENST00000493377 PTGFRNQ9P2B2 879 aa5.63□□□□□ -1.51
SYCP1-208ENST00000493377 PCDHB12Q9Y5F1 795 aa5.63□□□□□ -1.51
SYCP1-208ENST00000493377 TREHO43280 583 aa5.62□□□□□ -1.51
SYCP1-208ENST00000493377 TBC1D8O95759 1140 aa5.62□□□□□ -1.51
SYCP1-208ENST00000493377 RAG1P15918 1043 aa5.62□□□□□ -1.51
SYCP1-208ENST00000493377 C21orf58P58505 322 aa5.62□□□□□ -1.51
SYCP1-208ENST00000493377 MAP3K11Q16584 847 aa5.62□□□□□ -1.51
SYCP1-208ENST00000493377 FNDC7Q5VTL7 733 aa5.62□□□□□ -1.51
SYCP1-208ENST00000493377 ALG1LQ6GMV1 187 aa5.62□□□□□ -1.51
SYCP1-208ENST00000493377 ZNF627Q7L945 461 aa5.62□□□□□ -1.51
SYCP1-208ENST00000493377 KLHL36Q8N4N3 616 aa5.62□□□□□ -1.51
SYCP1-208ENST00000493377 MASP2O00187 686 aa5.61□□□□□ -1.51
SYCP1-208ENST00000493377 COMTP21964 271 aa5.61□□□□□ -1.51
SYCP1-208ENST00000493377 LCE1EQ5T753 118 aa5.61□□□□□ -1.51
SYCP1-208ENST00000493377 B4GALNT3Q6L9W6 998 aa5.61□□□□□ -1.51
SYCP1-208ENST00000493377 STK32CQ86UX6 486 aa5.61□□□□□ -1.51
SYCP1-208ENST00000493377 CDK4P11802 303 aa5.6□□□□□ -1.51
SYCP1-208ENST00000493377 RLBP1P12271 317 aa5.6□□□□□ -1.51
SYCP1-208ENST00000493377 MLECQ14165 292 aa5.6□□□□□ -1.51
SYCP1-208ENST00000493377 CWF19L1Q69YN2 538 aaKnown RBP5.6□□□□□ -1.51
SYCP1-208ENST00000493377 CD300LDQ6UXZ3 194 aa5.6□□□□□ -1.51
SYCP1-208ENST00000493377 ULK2Q8IYT8 1036 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms