RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 GSPT1P15170 499 aaKnown RBP25.97■■□□□ 1.75
LYSMD4-208ENST00000493256 CALML3P27482 149 aa25.97■■□□□ 1.75
LYSMD4-208ENST00000493256 SMAD3P84022 425 aaKnown RBP25.97■■□□□ 1.75
LYSMD4-208ENST00000493256 PWP2Q15269 919 aaKnown RBP25.97■■□□□ 1.75
LYSMD4-208ENST00000493256 ZNF697Q5TEC3 545 aa25.97■■□□□ 1.75
LYSMD4-208ENST00000493256 RNF207Q6ZRF8 634 aa25.97■■□□□ 1.75
LYSMD4-208ENST00000493256 KIAA1211Q6ZU35 1233 aa25.97■■□□□ 1.75
LYSMD4-208ENST00000493256 ANKS1AQ92625 1134 aa25.97■■□□□ 1.75
LYSMD4-208ENST00000493256 ZSCAN10Q96SZ4 725 aaPredicted RBP25.97■■□□□ 1.75
LYSMD4-208ENST00000493256 ZSWIM5Q9P217 1185 aa25.97■■□□□ 1.75
LYSMD4-208ENST00000493256 CTNNA3Q9UI47 895 aa25.97■■□□□ 1.75
LYSMD4-208ENST00000493256 RPS6P62753 249 aaKnown RBP25.96■■□□□ 1.75
LYSMD4-208ENST00000493256 ENAHQ8N8S7 591 aaPredicted RBP25.96■■□□□ 1.75
LYSMD4-208ENST00000493256 SLC43A3Q8NBI5 491 aa25.96■■□□□ 1.75
LYSMD4-208ENST00000493256 KAT14Q9H8E8 782 aa25.96■■□□□ 1.75
LYSMD4-208ENST00000493256 A0A0C4DFX4 3053 aa25.96■■□□□ 1.75
LYSMD4-208ENST00000493256 TLR3O15455 904 aaKnown RBP25.95■■□□□ 1.74
LYSMD4-208ENST00000493256 CABYRO75952 493 aa25.95■■□□□ 1.74
LYSMD4-208ENST00000493256 USH1GQ495M9 461 aa25.95■■□□□ 1.74
LYSMD4-208ENST00000493256 DUSP28Q4G0W2 176 aa25.95■■□□□ 1.74
LYSMD4-208ENST00000493256 TTC22Q5TAA0 569 aa25.95■■□□□ 1.74
LYSMD4-208ENST00000493256 MFSD5Q6N075 450 aa25.95■■□□□ 1.74
LYSMD4-208ENST00000493256 GRIN2DO15399 1336 aa25.94■■□□□ 1.74
LYSMD4-208ENST00000493256 TNKSO95271 1327 aa25.94■■□□□ 1.74
LYSMD4-208ENST00000493256 ZEB2O60315 1214 aa25.94■■□□□ 1.74
LYSMD4-208ENST00000493256 CD4P01730 458 aa25.94■■□□□ 1.74
LYSMD4-208ENST00000493256 WDR11Q9BZH6 1224 aa25.94■■□□□ 1.74
LYSMD4-208ENST00000493256 RBM47A0AV96 593 aaKnown RBP25.93■■□□□ 1.74
LYSMD4-208ENST00000493256 ITGA7Q13683 1181 aa25.93■■□□□ 1.74
LYSMD4-208ENST00000493256 CDC37Q16543 378 aaPredicted RBP25.93■■□□□ 1.74
LYSMD4-208ENST00000493256 PPP1R12CQ9BZL4 782 aa25.93■■□□□ 1.74
LYSMD4-208ENST00000493256 KRT23Q9C075 422 aa25.93■■□□□ 1.74
LYSMD4-208ENST00000493256 CNNM2Q9H8M5 875 aa25.93■■□□□ 1.74
LYSMD4-208ENST00000493256 EDNRBP24530 442 aa25.92■■□□□ 1.74
LYSMD4-208ENST00000493256 IRX6P78412 446 aaPredicted RBP25.92■■□□□ 1.74
LYSMD4-208ENST00000493256 ASPRV1Q53RT3 343 aa25.92■■□□□ 1.74
LYSMD4-208ENST00000493256 ADGRF4Q8IZF3 695 aa25.92■■□□□ 1.74
LYSMD4-208ENST00000493256 DNERQ8NFT8 737 aa25.92■■□□□ 1.74
LYSMD4-208ENST00000493256 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.92■■□□□ 1.74
LYSMD4-208ENST00000493256 CSF2RAP15509 400 aa25.91■■□□□ 1.74
LYSMD4-208ENST00000493256 PSMC6P62333 389 aa25.91■■□□□ 1.74
LYSMD4-208ENST00000493256 PDE4DQ08499 809 aa25.91■■□□□ 1.74
LYSMD4-208ENST00000493256 PPIGQ13427 754 aaKnown RBP eCLIP25.91■■□□□ 1.74
LYSMD4-208ENST00000493256 RGS22Q8NE09 1264 aa25.91■■□□□ 1.74
LYSMD4-208ENST00000493256 UBAC1Q9BSL1 405 aa25.91■■□□□ 1.74
LYSMD4-208ENST00000493256 TTYH1Q9H313 450 aaPredicted RBP25.91■■□□□ 1.74
LYSMD4-208ENST00000493256 SEMA6BQ9H3T3 888 aa25.91■■□□□ 1.74
LYSMD4-208ENST00000493256 RAD50Q92878 1312 aa25.9■■□□□ 1.74
LYSMD4-208ENST00000493256 C16orf59Q7L2K0 433 aa25.9■■□□□ 1.74
LYSMD4-208ENST00000493256 MYH6P13533 1939 aa25.89■■□□□ 1.74
LYSMD4-208ENST00000493256 PARP1P09874 1014 aaKnown RBP25.89■■□□□ 1.74
LYSMD4-208ENST00000493256 CYP2C18P33260 490 aa25.89■■□□□ 1.74
LYSMD4-208ENST00000493256 TMEM240Q5SV17 173 aa25.89■■□□□ 1.74
LYSMD4-208ENST00000493256 TMEM199Q8N511 208 aa25.89■■□□□ 1.74
LYSMD4-208ENST00000493256 OR6J1Q8NGC5 347 aa25.89■■□□□ 1.74
LYSMD4-208ENST00000493256 MPHOSPH6Q99547 160 aaKnown RBP25.89■■□□□ 1.74
LYSMD4-208ENST00000493256 CDX2Q99626 313 aaPredicted RBP25.89■■□□□ 1.74
LYSMD4-208ENST00000493256 SEZ6LQ9BYH1 1024 aa25.89■■□□□ 1.74
LYSMD4-208ENST00000493256 ABCB11O95342 1321 aa25.88■■□□□ 1.73
LYSMD4-208ENST00000493256 PPP2R5BQ15173 497 aa25.88■■□□□ 1.73
LYSMD4-208ENST00000493256 QRICH1Q2TAL8 776 aa25.88■■□□□ 1.73
LYSMD4-208ENST00000493256 IFIT1BQ5T764 474 aaKnown RBP25.88■■□□□ 1.73
LYSMD4-208ENST00000493256 CYB5R4Q7L1T6 521 aa25.88■■□□□ 1.73
LYSMD4-208ENST00000493256 TBC1D5Q92609 795 aa25.88■■□□□ 1.73
LYSMD4-208ENST00000493256 TRPV6Q9H1D0 765 aa25.88■■□□□ 1.73
LYSMD4-208ENST00000493256 HIPK3Q9H422 1215 aa25.88■■□□□ 1.73
LYSMD4-208ENST00000493256 CUL9Q8IWT3 2517 aa25.88■■□□□ 1.73
LYSMD4-208ENST00000493256 B4GALT4O60513 344 aa25.87■■□□□ 1.73
LYSMD4-208ENST00000493256 CHMLP26374 656 aa25.87■■□□□ 1.73
LYSMD4-208ENST00000493256 PURAQ00577 322 aaKnown RBP25.87■■□□□ 1.73
LYSMD4-208ENST00000493256 SEC23AQ15436 765 aa25.87■■□□□ 1.73
LYSMD4-208ENST00000493256 SCFD2Q8WU76 684 aa25.87■■□□□ 1.73
LYSMD4-208ENST00000493256 JMJD4Q9H9V9 463 aa25.87■■□□□ 1.73
LYSMD4-208ENST00000493256 POLR3EQ9NVU0 708 aa25.87■■□□□ 1.73
LYSMD4-208ENST00000493256 UMODL1Q5DID0 1318 aa25.87■■□□□ 1.73
LYSMD4-208ENST00000493256 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.86■■□□□ 1.73
LYSMD4-208ENST00000493256 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.86■■□□□ 1.73
LYSMD4-208ENST00000493256 B4DLN1 442 aa25.86■■□□□ 1.73
LYSMD4-208ENST00000493256 DHX16O60231 1041 aaKnown RBP25.86■■□□□ 1.73
LYSMD4-208ENST00000493256 ACRP10323 421 aa25.86■■□□□ 1.73
LYSMD4-208ENST00000493256 CPT1AP50416 773 aa25.86■■□□□ 1.73
LYSMD4-208ENST00000493256 MRPL12P52815 198 aaKnown RBP25.86■■□□□ 1.73
LYSMD4-208ENST00000493256 PTH1RQ03431 593 aa25.86■■□□□ 1.73
LYSMD4-208ENST00000493256 STAG2Q8N3U4 1231 aa25.86■■□□□ 1.73
LYSMD4-208ENST00000493256 SYTL5Q8TDW5 730 aaPredicted RBP25.86■■□□□ 1.73
LYSMD4-208ENST00000493256 COPS5Q92905 334 aa25.86■■□□□ 1.73
LYSMD4-208ENST00000493256 MAF1Q9H063 256 aa25.86■■□□□ 1.73
LYSMD4-208ENST00000493256 VAT1LQ9HCJ6 419 aa25.86■■□□□ 1.73
LYSMD4-208ENST00000493256 COL20A1Q9P218 1284 aa25.86■■□□□ 1.73
LYSMD4-208ENST00000493256 CDH23Q9H251 3354 aa25.86■■□□□ 1.73
LYSMD4-208ENST00000493256 NKRFO15226 690 aaKnown RBP eCLIP25.85■■□□□ 1.73
LYSMD4-208ENST00000493256 MYL3P08590 195 aa25.85■■□□□ 1.73
LYSMD4-208ENST00000493256 RASIP1Q5U651 963 aa25.85■■□□□ 1.73
LYSMD4-208ENST00000493256 ZNF365Q70YC5 407 aa25.85■■□□□ 1.73
LYSMD4-208ENST00000493256 FBXO11Q86XK2 927 aa25.85■■□□□ 1.73
LYSMD4-208ENST00000493256 RUFY2Q8WXA3 655 aa25.85■■□□□ 1.73
LYSMD4-208ENST00000493256 NOC4LQ9BVI4 516 aaKnown RBP25.85■■□□□ 1.73
LYSMD4-208ENST00000493256 ALDH8A1Q9H2A2 487 aaPredicted RBP25.85■■□□□ 1.73
LYSMD4-208ENST00000493256 TMEM265A0A087WTH1 108 aa25.84■■□□□ 1.73
LYSMD4-208ENST00000493256 CYP21A2P08686 494 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms