RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 PQBP1O60828 265 aaKnown RBP5.41□□□□□ -1.54
UBR4-215ENST00000492606 P4HBP07237 508 aaKnown RBP5.41□□□□□ -1.54
UBR4-215ENST00000492606 CTSOP43234 321 aaPredicted RBP5.41□□□□□ -1.54
UBR4-215ENST00000492606 ZNF200P98182 395 aaPredicted RBP5.41□□□□□ -1.54
UBR4-215ENST00000492606 EIF4A2Q14240 407 aaKnown RBP5.41□□□□□ -1.54
UBR4-215ENST00000492606 COL19A1Q14993 1142 aa5.41□□□□□ -1.54
UBR4-215ENST00000492606 SMAD2Q15796 467 aaKnown RBP5.41□□□□□ -1.54
UBR4-215ENST00000492606 RTN1Q16799 776 aa5.41□□□□□ -1.54
UBR4-215ENST00000492606 C4orf17Q53FE4 359 aa5.41□□□□□ -1.54
UBR4-215ENST00000492606 PSRC1Q6PGN9 363 aaPredicted RBP5.41□□□□□ -1.54
UBR4-215ENST00000492606 DDX46Q7L014 1031 aaKnown RBP5.41□□□□□ -1.54
UBR4-215ENST00000492606 KIAA0825Q8IV33 1275 aa5.41□□□□□ -1.54
UBR4-215ENST00000492606 CYP4X1Q8N118 509 aa5.41□□□□□ -1.54
UBR4-215ENST00000492606 GLIS3Q8NEA6 775 aa5.41□□□□□ -1.54
UBR4-215ENST00000492606 GDPD5Q8WTR4 605 aa5.41□□□□□ -1.54
UBR4-215ENST00000492606 CELF1Q92879 486 aaKnown RBP5.41□□□□□ -1.54
UBR4-215ENST00000492606 MRRFQ96E11 262 aaKnown RBP5.41□□□□□ -1.54
UBR4-215ENST00000492606 ZSCAN10Q96SZ4 725 aaPredicted RBP5.41□□□□□ -1.54
UBR4-215ENST00000492606 PHACTR1Q9C0D0 580 aa5.41□□□□□ -1.54
UBR4-215ENST00000492606 SEMA4AQ9H3S1 761 aa5.41□□□□□ -1.54
UBR4-215ENST00000492606 VEZTQ9HBM0 779 aa5.41□□□□□ -1.54
UBR4-215ENST00000492606 LMCD1Q9NZU5 365 aa5.41□□□□□ -1.54
UBR4-215ENST00000492606 KLK14Q9P0G3 267 aa5.41□□□□□ -1.54
UBR4-215ENST00000492606 DDX20Q9UHI6 824 aaKnown RBP5.41□□□□□ -1.54
UBR4-215ENST00000492606 RAI2Q9Y5P3 530 aa5.41□□□□□ -1.54
UBR4-215ENST00000492606 FANCMQ8IYD8 2048 aa5.41□□□□□ -1.54
UBR4-215ENST00000492606 MYBBP1AQ9BQG0 1328 aaKnown RBP5.41□□□□□ -1.54
UBR4-215ENST00000492606 C1QL1O75973 258 aa5.4□□□□□ -1.54
UBR4-215ENST00000492606 NTRK1P04629 796 aa5.4□□□□□ -1.54
UBR4-215ENST00000492606 GPC1P35052 558 aa5.4□□□□□ -1.54
UBR4-215ENST00000492606 PPATQ06203 517 aa5.4□□□□□ -1.54
UBR4-215ENST00000492606 CCDC6Q16204 474 aa5.4□□□□□ -1.54
UBR4-215ENST00000492606 C11orf91Q3C1V1 193 aa5.4□□□□□ -1.54
UBR4-215ENST00000492606 C19orf48Q6RUI8 117 aa5.4□□□□□ -1.54
UBR4-215ENST00000492606 OTOP2Q7RTS6 562 aa5.4□□□□□ -1.54
UBR4-215ENST00000492606 RHBDD1Q8TEB9 315 aa5.4□□□□□ -1.54
UBR4-215ENST00000492606 VTI1AQ96AJ9 217 aa5.4□□□□□ -1.54
UBR4-215ENST00000492606 PRMT6Q96LA8 375 aaPredicted RBP5.4□□□□□ -1.54
UBR4-215ENST00000492606 INSM2Q96T92 566 aaPredicted RBP5.4□□□□□ -1.54
UBR4-215ENST00000492606 HAUS7Q99871 368 aa5.4□□□□□ -1.54
UBR4-215ENST00000492606 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.4□□□□□ -1.541e-14■■■□□ 19.2
UBR4-215ENST00000492606 RNF19AQ9NV58 838 aa5.4□□□□□ -1.54
UBR4-215ENST00000492606 DMGDHQ9UI17 866 aaKnown RBP5.4□□□□□ -1.54
UBR4-215ENST00000492606 TBX21Q9UL17 535 aa5.4□□□□□ -1.54
UBR4-215ENST00000492606 FAM50BQ9Y247 325 aa5.4□□□□□ -1.54
UBR4-215ENST00000492606 NF1P21359 2839 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 MYO7AQ13402 2215 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 CELSR3Q9NYQ7 3312 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 EIF4E1BA6NMX2 242 aaKnown RBP5.39□□□□□ -1.55
UBR4-215ENST00000492606 PRR5-ARHGAP8B1AHC4 643 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 SPATA31C2B4DYI2 1134 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 UFL1O94874 794 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 HCLS1P14317 486 aaPredicted RBP5.39□□□□□ -1.55
UBR4-215ENST00000492606 ZKSCAN1P17029 563 aaPredicted RBP5.39□□□□□ -1.55
UBR4-215ENST00000492606 NCLP19338 710 aaKnown RBP5.39□□□□□ -1.55
UBR4-215ENST00000492606 VAMP1P23763 118 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 BRD2P25440 801 aaKnown RBP5.39□□□□□ -1.55
UBR4-215ENST00000492606 ARHGAP8P85298 464 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 C19orf57Q0VDD7 668 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 ANGPT1Q15389 498 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 DLGAP5Q15398 846 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 TMEM67Q5HYA8 995 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 CCDC174Q6PII3 467 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 ZSCAN29Q8IWY8 852 aaPredicted RBP5.39□□□□□ -1.55
UBR4-215ENST00000492606 ZNF34Q8IZ26 560 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 TTC5Q8N0Z6 440 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 SUMF1Q8NBK3 374 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 TRPV1Q8NER1 839 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 NANOS1Q8WY41 292 aaKnown RBP5.39□□□□□ -1.55
UBR4-215ENST00000492606 CITED4Q96RK1 184 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 POP1Q99575 1024 aaKnown RBP5.39□□□□□ -1.55
UBR4-215ENST00000492606 NIFKQ9BYG3 293 aaKnown RBP5.39□□□□□ -1.55
UBR4-215ENST00000492606 POLIQ9UNA4 740 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 ARAP2Q8WZ64 1704 aa5.39□□□□□ -1.55
UBR4-215ENST00000492606 A0A1B0GTL3 188 aa5.38□□□□□ -1.55
UBR4-215ENST00000492606 KBTBD13C9JR72 458 aa5.38□□□□□ -1.55
UBR4-215ENST00000492606 STXBP3O00186 592 aa5.38□□□□□ -1.55
UBR4-215ENST00000492606 OPLAHO14841 1288 aa5.38□□□□□ -1.55
UBR4-215ENST00000492606 MBTPS2O43462 519 aa5.38□□□□□ -1.55
UBR4-215ENST00000492606 KCNQ3O43525 872 aa5.38□□□□□ -1.55
UBR4-215ENST00000492606 FGBP02675 491 aa5.38□□□□□ -1.55
UBR4-215ENST00000492606 XRCC5P13010 732 aaKnown RBP5.38□□□□□ -1.55
UBR4-215ENST00000492606 GRNP28799 593 aaKnown RBP5.38□□□□□ -1.55
UBR4-215ENST00000492606 LTBRP36941 435 aa5.38□□□□□ -1.55
UBR4-215ENST00000492606 CLUL1Q15846 466 aa5.38□□□□□ -1.55
UBR4-215ENST00000492606 ANO1Q5XXA6 986 aa5.38□□□□□ -1.55
UBR4-215ENST00000492606 LINC00528Q8N1L1 170 aa5.38□□□□□ -1.55
UBR4-215ENST00000492606 ZNF280CQ8ND82 737 aa5.38□□□□□ -1.55
UBR4-215ENST00000492606 IFT43Q96FT9 208 aa5.38□□□□□ -1.55
UBR4-215ENST00000492606 WRNIP1Q96S55 665 aa5.38□□□□□ -1.55
UBR4-215ENST00000492606 IL23AQ9NPF7 189 aa5.38□□□□□ -1.55
UBR4-215ENST00000492606 SLC4A7Q9Y6M7 1214 aa5.38□□□□□ -1.55
UBR4-215ENST00000492606 LOC730098B7Z3J9 87 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 RECKO95980 971 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 AVPP01185 164 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 PDGFAP04085 211 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 ATP4AP20648 1035 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 TGM1P22735 817 aa5.37□□□□□ -1.55
UBR4-215ENST00000492606 MRPL58Q14197 206 aaKnown RBP5.37□□□□□ -1.55
UBR4-215ENST00000492606 FAM110CQ1W6H9 321 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms