RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 CARFQ8N187 725 aa4.59□□□□□ -1.67
HMGB1P30-201ENST00000492455 ZNF526Q8TF50 670 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P30-201ENST00000492455 ARMC5Q96C12 935 aa4.59□□□□□ -1.67
HMGB1P30-201ENST00000492455 ATG4CQ96DT6 458 aa4.59□□□□□ -1.67
HMGB1P30-201ENST00000492455 FERD3LQ96RJ6 166 aa4.59□□□□□ -1.67
HMGB1P30-201ENST00000492455 KIF2CQ99661 725 aa4.59□□□□□ -1.67
HMGB1P30-201ENST00000492455 RNF38Q9H0F5 515 aa4.59□□□□□ -1.67
HMGB1P30-201ENST00000492455 GMIPQ9P107 970 aa4.59□□□□□ -1.67
HMGB1P30-201ENST00000492455 IMPACTQ9P2X3 320 aa4.59□□□□□ -1.67
HMGB1P30-201ENST00000492455 SLPIP03973 132 aa4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 PLA2G1BP04054 148 aaKnown RBP4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 NME1P15531 152 aaKnown RBP4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 ATP2B1P20020 1258 aa4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 EIF6P56537 245 aaKnown RBP4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 ZYXQ15942 572 aaKnown RBP4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 CDCP2Q5VXM1 449 aa4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 PAQR3Q6TCH7 311 aa4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 SH3RF3Q8TEJ3 882 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 UBXN4Q92575 508 aa4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 ANAPC16Q96DE5 110 aa4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 RBM15Q96T37 977 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 PRDM14Q9GZV8 571 aa4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 CNNM2Q9H8M5 875 aa4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 ERVK13-1Q9NX77 482 aa4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 NTMQ9P121 344 aa4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 USP35Q9P2H5 1018 aa4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 DBR1Q9UK59 544 aaKnown RBP4.58□□□□□ -1.68
HMGB1P30-201ENST00000492455 TNFRSF10CO14798 259 aa4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 SMAD7O15105 426 aaKnown RBP4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 PRAMEF1O95521 474 aa4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 PLATP00750 562 aa4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 CYBBP04839 570 aa4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 SSBP05455 408 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 IMPDH2P12268 514 aa4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 NCAM1P13591 858 aa4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 POLR2BP30876 1174 aaKnown RBP4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 GTF2F1P35269 517 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 SERINC3Q13530 473 aa4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 ARSHQ5FYA8 562 aa4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 FBXW10Q5XX13 1052 aa4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 JAMLQ86YT9 394 aa4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 TAB3Q8N5C8 712 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 NAT16Q8N8M0 369 aa4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 SLC9A7Q96T83 725 aa4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 DNAJC2Q99543 621 aaKnown RBP4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 KRTAP3-1Q9BYR8 98 aa4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 PRKAG3Q9UGI9 489 aa4.57□□□□□ -1.68
HMGB1P30-201ENST00000492455 LTBP3Q9NS15 1303 aa4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 A0A1W2PQH9 124 aa4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 SIGLEC6O43699 453 aa4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 UBOX5O94941 541 aa4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 RAG1P15918 1043 aa4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 ACVRL1P37023 503 aa4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 SARSP49591 514 aaKnown RBP4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 CASP7P55210 303 aa4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 HTRA3P83110 453 aa4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 NBPF9Q3BBW0 867 aa4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 BICRALQ6AI39 1079 aa4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 TTLL7Q6ZT98 887 aa4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 NLRC3Q7RTR2 1065 aa4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 C19orf47Q8N9M1 422 aaKnown RBP4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 MICAL1Q8TDZ2 1067 aa4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 HNRNPLLQ8WVV9 542 aaKnown RBP4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 CHST7Q9NS84 486 aa4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 PPP1R1BQ9UD71 204 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P30-201ENST00000492455 ZNF536O15090 1300 aa4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 RGS13O14921 159 aa4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 STK10O94804 968 aaKnown RBP4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 ATF2P15336 505 aa4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 GUCY2CP25092 1073 aa4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 LRRFIP1Q32MZ4 808 aaKnown RBP4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 INTS3Q68E01 1043 aaKnown RBP4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 CRIP3Q6Q6R5 217 aa4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 GLB1LQ6UWU2 654 aa4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 ANKS3Q6ZW76 656 aa4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 FAM124AQ86V42 546 aa4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 TMEM192Q8IY95 271 aa4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 CELF2-AS1Q8N7Q2 184 aa4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 OR6P1Q8NGX9 317 aa4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 CPLX3Q8WVH0 158 aa4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 CDK5RAP1Q96SZ6 601 aaKnown RBP4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 TM9SF2Q99805 663 aa4.55□□□□□ -1.68
HMGB1P30-201ENST00000492455 SRGAP3O43295 1099 aa4.54□□□□□ -1.68
HMGB1P30-201ENST00000492455 BMP8BP34820 402 aa4.54□□□□□ -1.68
HMGB1P30-201ENST00000492455 NBPF12Q5TAG4 269 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P30-201ENST00000492455 BORAQ6PGQ7 559 aa4.54□□□□□ -1.68
HMGB1P30-201ENST00000492455 UNC5AQ6ZN44 842 aa4.54□□□□□ -1.68
HMGB1P30-201ENST00000492455 SPRED1Q7Z699 444 aa4.54□□□□□ -1.68
HMGB1P30-201ENST00000492455 JMJD8Q96S16 334 aa4.54□□□□□ -1.68
HMGB1P30-201ENST00000492455 VPS11Q9H270 941 aa4.54□□□□□ -1.68
HMGB1P30-201ENST00000492455 FAM86C2PA6NEL3 165 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 B2RBV5 119 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 F8W031 263 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 MEIS1O00470 390 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 ZNF205O95201 554 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 DBHP09172 617 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 FBLN1P23142 703 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 PRR5P85299 388 aa4.53□□□□□ -1.68
HMGB1P30-201ENST00000492455 KIAA2012Q0VF49 1180 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms