RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 MAFAQ8NHW3 353 aaPredicted RBP18.01■□□□□ 0.47
MRPL55-231ENST00000492170 MPHOSPH6Q99547 160 aaKnown RBP18.01■□□□□ 0.47
MRPL55-231ENST00000492170 OSBPL3Q9H4L5 887 aa18.01■□□□□ 0.47
MRPL55-231ENST00000492170 DIAPH3Q9NSV4 1193 aa18.01■□□□□ 0.47
MRPL55-231ENST00000492170 LCTP09848 1927 aa18.01■□□□□ 0.47
MRPL55-231ENST00000492170 CUL9Q8IWT3 2517 aa18.01■□□□□ 0.47
MRPL55-231ENST00000492170 NEDD4P46934 1319 aa18■□□□□ 0.47
MRPL55-231ENST00000492170 CDH23Q9H251 3354 aa18■□□□□ 0.47
MRPL55-231ENST00000492170 SNHG28P0DPA3 235 aa18■□□□□ 0.47
MRPL55-231ENST00000492170 FOSL2P15408 326 aa18■□□□□ 0.47
MRPL55-231ENST00000492170 PTGS1P23219 599 aa18■□□□□ 0.47
MRPL55-231ENST00000492170 CALML3P27482 149 aa18■□□□□ 0.47
MRPL55-231ENST00000492170 NUCB1Q02818 461 aa18■□□□□ 0.47
MRPL55-231ENST00000492170 DUSP28Q4G0W2 176 aa18■□□□□ 0.47
MRPL55-231ENST00000492170 TMEM240Q5SV17 173 aa18■□□□□ 0.47
MRPL55-231ENST00000492170 GPATCH4Q5T3I0 446 aaKnown RBP18■□□□□ 0.47
MRPL55-231ENST00000492170 SLC30A10Q6XR72 485 aa18■□□□□ 0.47
MRPL55-231ENST00000492170 RNF207Q6ZRF8 634 aa18■□□□□ 0.47
MRPL55-231ENST00000492170 PLEKHM2Q8IWE5 1019 aa18■□□□□ 0.47
MRPL55-231ENST00000492170 CLEC4DQ8WXI8 215 aa18■□□□□ 0.47
MRPL55-231ENST00000492170 HIPK3Q9H422 1215 aa18■□□□□ 0.47
MRPL55-231ENST00000492170 HIP1O00291 1037 aa17.99■□□□□ 0.47
MRPL55-231ENST00000492170 CYP2C18P33260 490 aa17.99■□□□□ 0.47
MRPL55-231ENST00000492170 CCDC178Q5BJE1 867 aa17.99■□□□□ 0.47
MRPL55-231ENST00000492170 CWC27Q6UX04 472 aaKnown RBP17.99■□□□□ 0.47
MRPL55-231ENST00000492170 IQCA1Q86XH1 822 aa17.99■□□□□ 0.47
MRPL55-231ENST00000492170 DGKHQ86XP1 1220 aa17.99■□□□□ 0.47
MRPL55-231ENST00000492170 EXOC6Q8TAG9 804 aa17.99■□□□□ 0.47
MRPL55-231ENST00000492170 WDR11Q9BZH6 1224 aa17.99■□□□□ 0.47
MRPL55-231ENST00000492170 ACRP10323 421 aa17.98■□□□□ 0.47
MRPL55-231ENST00000492170 CPT1AP50416 773 aa17.98■□□□□ 0.47
MRPL55-231ENST00000492170 RPS6P62753 249 aaKnown RBP17.98■□□□□ 0.47
MRPL55-231ENST00000492170 PDE4DQ08499 809 aa17.98■□□□□ 0.47
MRPL55-231ENST00000492170 TMEM63BQ5T3F8 832 aa17.98■□□□□ 0.47
MRPL55-231ENST00000492170 C16orf59Q7L2K0 433 aa17.98■□□□□ 0.47
MRPL55-231ENST00000492170 TIFAQ96CG3 184 aa17.98■□□□□ 0.47
MRPL55-231ENST00000492170 ZKSCAN3Q9BRR0 538 aa17.98■□□□□ 0.47
MRPL55-231ENST00000492170 MTIF3Q9H2K0 278 aaKnown RBP17.98■□□□□ 0.47
MRPL55-231ENST00000492170 IL23AQ9NPF7 189 aa17.98■□□□□ 0.47
MRPL55-231ENST00000492170 POLR3EQ9NVU0 708 aa17.98■□□□□ 0.47
MRPL55-231ENST00000492170 PRUNE2Q8WUY3 3088 aa17.98■□□□□ 0.47
MRPL55-231ENST00000492170 GRIN2DO15399 1336 aa17.98■□□□□ 0.47
MRPL55-231ENST00000492170 RAD50Q92878 1312 aa17.98■□□□□ 0.47
MRPL55-231ENST00000492170 RBM47A0AV96 593 aaKnown RBP17.97■□□□□ 0.47
MRPL55-231ENST00000492170 B4DLN1 442 aa17.97■□□□□ 0.47
MRPL55-231ENST00000492170 B4GALT4O60513 344 aa17.97■□□□□ 0.47
MRPL55-231ENST00000492170 IGHDP01880 384 aa17.97■□□□□ 0.47
MRPL55-231ENST00000492170 MRPL12P52815 198 aaKnown RBP17.97■□□□□ 0.47
MRPL55-231ENST00000492170 PSMC6P62333 389 aa17.97■□□□□ 0.47
MRPL55-231ENST00000492170 PPP2R5BQ15173 497 aa17.97■□□□□ 0.47
MRPL55-231ENST00000492170 BRDTQ58F21 947 aaPredicted RBP17.97■□□□□ 0.47
MRPL55-231ENST00000492170 RASIP1Q5U651 963 aa17.97■□□□□ 0.47
MRPL55-231ENST00000492170 ZNF365Q70YC5 407 aa17.97■□□□□ 0.47
MRPL55-231ENST00000492170 PNMA1Q8ND90 353 aa17.97■□□□□ 0.47
MRPL55-231ENST00000492170 DNERQ8NFT8 737 aa17.97■□□□□ 0.47
MRPL55-231ENST00000492170 OR6J1Q8NGC5 347 aa17.97■□□□□ 0.47
MRPL55-231ENST00000492170 KAT14Q9H8E8 782 aa17.97■□□□□ 0.47
MRPL55-231ENST00000492170 LAMA4Q16363 1823 aa17.97■□□□□ 0.47
MRPL55-231ENST00000492170 NKRFO15226 690 aaKnown RBP eCLIP17.96■□□□□ 0.47
MRPL55-231ENST00000492170 KDM4AO75164 1064 aa17.96■□□□□ 0.47
MRPL55-231ENST00000492170 GOLGA8HP0CJ92 632 aa17.96■□□□□ 0.47
MRPL55-231ENST00000492170 USH1GQ495M9 461 aa17.96■□□□□ 0.47
MRPL55-231ENST00000492170 SCFD2Q8WU76 684 aa17.96■□□□□ 0.47
MRPL55-231ENST00000492170 DSCC1Q9BVC3 393 aa17.96■□□□□ 0.47
MRPL55-231ENST00000492170 TRPV6Q9H1D0 765 aa17.96■□□□□ 0.47
MRPL55-231ENST00000492170 ZNF576Q9H609 170 aa17.96■□□□□ 0.47
MRPL55-231ENST00000492170 GPHNQ9NQX3 736 aaPredicted RBP17.96■□□□□ 0.47
MRPL55-231ENST00000492170 B4E1Z4 1266 aa17.95■□□□□ 0.46
MRPL55-231ENST00000492170 EDNRBP24530 442 aa17.95■□□□□ 0.46
MRPL55-231ENST00000492170 GRIN2CQ14957 1233 aa17.95■□□□□ 0.46
MRPL55-231ENST00000492170 IMMTQ16891 758 aaKnown RBP17.95■□□□□ 0.46
MRPL55-231ENST00000492170 HERVK_113Q902F9 699 aa17.95■□□□□ 0.46
MRPL55-231ENST00000492170 NOC4LQ9BVI4 516 aaKnown RBP17.95■□□□□ 0.46
MRPL55-231ENST00000492170 COL25A1Q9BXS0 654 aaPredicted RBP17.95■□□□□ 0.46
MRPL55-231ENST00000492170 PBX4Q9BYU1 374 aa17.95■□□□□ 0.46
MRPL55-231ENST00000492170 UBA5Q9GZZ9 404 aa17.95■□□□□ 0.46
MRPL55-231ENST00000492170 ALDH8A1Q9H2A2 487 aaPredicted RBP17.95■□□□□ 0.46
MRPL55-231ENST00000492170 CTNNA3Q9UI47 895 aa17.95■□□□□ 0.46
MRPL55-231ENST00000492170 UMODL1Q5DID0 1318 aa17.95■□□□□ 0.46
MRPL55-231ENST00000492170 FGBP02675 491 aa17.94■□□□□ 0.46
MRPL55-231ENST00000492170 MYL3P08590 195 aa17.94■□□□□ 0.46
MRPL55-231ENST00000492170 SUPT20HL2P0C7V6 817 aa17.94■□□□□ 0.46
MRPL55-231ENST00000492170 CCL23P55773 120 aa17.94■□□□□ 0.46
MRPL55-231ENST00000492170 PURAQ00577 322 aaKnown RBP17.94■□□□□ 0.46
MRPL55-231ENST00000492170 CDC37Q16543 378 aaPredicted RBP17.94■□□□□ 0.46
MRPL55-231ENST00000492170 ASPRV1Q53RT3 343 aa17.94■□□□□ 0.46
MRPL55-231ENST00000492170 RGS22Q8NE09 1264 aa17.94■□□□□ 0.46
MRPL55-231ENST00000492170 ANKS1AQ92625 1134 aa17.94■□□□□ 0.46
MRPL55-231ENST00000492170 ZSCAN10Q96SZ4 725 aaPredicted RBP17.94■□□□□ 0.46
MRPL55-231ENST00000492170 MTG1Q9BT17 334 aaPredicted RBP17.94■□□□□ 0.46
MRPL55-231ENST00000492170 CPVLQ9H3G5 476 aa17.94■□□□□ 0.46
MRPL55-231ENST00000492170 ABCB11O95342 1321 aa17.94■□□□□ 0.46
MRPL55-231ENST00000492170 GRXCR1A8MXD5 290 aa17.93■□□□□ 0.46
MRPL55-231ENST00000492170 PBX2P40425 430 aa17.93■□□□□ 0.46
MRPL55-231ENST00000492170 RAB30Q15771 203 aa17.93■□□□□ 0.46
MRPL55-231ENST00000492170 RPUSD2Q8IZ73 545 aaKnown RBP17.93■□□□□ 0.46
MRPL55-231ENST00000492170 ENAHQ8N8S7 591 aaPredicted RBP17.93■□□□□ 0.46
MRPL55-231ENST00000492170 KRT23Q9C075 422 aa17.93■□□□□ 0.46
MRPL55-231ENST00000492170 MAF1Q9H063 256 aa17.93■□□□□ 0.46
MRPL55-231ENST00000492170 WNT8AQ9H1J5 351 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms