RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 ANKS1AQ92625 1134 aa16.55■□□□□ 0.24
ATG4B-222ENST00000491867 MTG1Q9BT17 334 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-222ENST00000491867 MKNK2Q9HBH9 465 aa16.55■□□□□ 0.24
ATG4B-222ENST00000491867 VTA1Q9NP79 307 aa16.55■□□□□ 0.24
ATG4B-222ENST00000491867 WDR87Q6ZQQ6 2873 aa16.55■□□□□ 0.24
ATG4B-222ENST00000491867 GREB1LQ9C091 1923 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-222ENST00000491867 ERVK-21P61565 698 aa16.54■□□□□ 0.24
ATG4B-222ENST00000491867 BFSP2Q13515 415 aa16.54■□□□□ 0.24
ATG4B-222ENST00000491867 DUSP28Q4G0W2 176 aa16.54■□□□□ 0.24
ATG4B-222ENST00000491867 TRERF1Q96PN7 1200 aa16.54■□□□□ 0.24
ATG4B-222ENST00000491867 TGS1Q96RS0 853 aaKnown RBP16.54■□□□□ 0.24
ATG4B-222ENST00000491867 GPHNQ9NQX3 736 aaPredicted RBP16.54■□□□□ 0.24
ATG4B-222ENST00000491867 PAG1Q9NWQ8 432 aa16.54■□□□□ 0.24
ATG4B-222ENST00000491867 ISY1Q9ULR0 285 aaKnown RBP16.54■□□□□ 0.24
ATG4B-222ENST00000491867 TRIP12Q14669 1992 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-222ENST00000491867 SCN10AQ9Y5Y9 1956 aa16.53■□□□□ 0.24
ATG4B-222ENST00000491867 FDX1P10109 184 aa16.53■□□□□ 0.24
ATG4B-222ENST00000491867 ALAS1P13196 640 aa16.53■□□□□ 0.24
ATG4B-222ENST00000491867 CPT1AP50416 773 aa16.53■□□□□ 0.24
ATG4B-222ENST00000491867 DEFB103AP81534 67 aa16.53■□□□□ 0.24
ATG4B-222ENST00000491867 NFRKBQ6P4R8 1299 aa16.53■□□□□ 0.24
ATG4B-222ENST00000491867 HFE2Q6ZVN8 426 aa16.53■□□□□ 0.24
ATG4B-222ENST00000491867 LRRC47Q8N1G4 583 aaKnown RBP16.53■□□□□ 0.24
ATG4B-222ENST00000491867 PURBQ96QR8 312 aaKnown RBP16.53■□□□□ 0.24
ATG4B-222ENST00000491867 PHOX2BQ99453 314 aa16.53■□□□□ 0.24
ATG4B-222ENST00000491867 RAD9AQ99638 391 aa16.53■□□□□ 0.24
ATG4B-222ENST00000491867 WDR11Q9BZH6 1224 aa16.53■□□□□ 0.24
ATG4B-222ENST00000491867 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.53■□□□□ 0.24
ATG4B-222ENST00000491867 BCL11AQ9H165 835 aa16.53■□□□□ 0.24
ATG4B-222ENST00000491867 ARPP21Q9UBL0 812 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-222ENST00000491867 PTPRSQ13332 1948 aa16.53■□□□□ 0.24
ATG4B-222ENST00000491867 IGKV6D-41A0A0C4DH26 115 aa16.52■□□□□ 0.24
ATG4B-222ENST00000491867 TMEM232C9JQI7 657 aa16.52■□□□□ 0.24
ATG4B-222ENST00000491867 H3BQ06 376 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-222ENST00000491867 BMP3P12645 472 aa16.52■□□□□ 0.24
ATG4B-222ENST00000491867 TKFCQ3LXA3 575 aa16.52■□□□□ 0.24
ATG4B-222ENST00000491867 PUS10Q3MIT2 529 aaKnown RBP16.52■□□□□ 0.24
ATG4B-222ENST00000491867 MUM1L1Q5H9M0 696 aa16.52■□□□□ 0.24
ATG4B-222ENST00000491867 RHPN1Q8TCX5 695 aa16.52■□□□□ 0.24
ATG4B-222ENST00000491867 MKL1Q969V6 931 aa16.52■□□□□ 0.24
ATG4B-222ENST00000491867 CYP39A1Q9NYL5 469 aa16.52■□□□□ 0.24
ATG4B-222ENST00000491867 NOD1Q9Y239 953 aa16.52■□□□□ 0.24
ATG4B-222ENST00000491867 TECTAO75443 2155 aa16.52■□□□□ 0.24
ATG4B-222ENST00000491867 MYH4Q9Y623 1939 aa16.52■□□□□ 0.23
ATG4B-222ENST00000491867 TANC1Q9C0D5 1861 aa16.51■□□□□ 0.23
ATG4B-222ENST00000491867 LINC01553A4QN01 128 aa16.51■□□□□ 0.23
ATG4B-222ENST00000491867 GJB5O95377 273 aa16.51■□□□□ 0.23
ATG4B-222ENST00000491867 IKQ13123 557 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-222ENST00000491867 SLFN13Q68D06 897 aa16.51■□□□□ 0.23
ATG4B-222ENST00000491867 CEP85Q6P2H3 762 aa16.51■□□□□ 0.23
ATG4B-222ENST00000491867 RPAP2Q8IXW5 612 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-222ENST00000491867 GMCL1P1Q8NEA9 526 aa16.51■□□□□ 0.23
ATG4B-222ENST00000491867 OR6J1Q8NGC5 347 aa16.51■□□□□ 0.23
ATG4B-222ENST00000491867 MORC4Q8TE76 937 aa16.51■□□□□ 0.23
ATG4B-222ENST00000491867 CHMP4CQ96CF2 233 aa16.51■□□□□ 0.23
ATG4B-222ENST00000491867 CEP95Q96GE4 821 aa16.51■□□□□ 0.23
ATG4B-222ENST00000491867 MTMR4Q9NYA4 1195 aa16.51■□□□□ 0.23
ATG4B-222ENST00000491867 MINDY4BA8MYZ0 360 aa16.5■□□□□ 0.23
ATG4B-222ENST00000491867 IFIT2P09913 472 aaKnown RBP16.5■□□□□ 0.23
ATG4B-222ENST00000491867 STAT2P52630 851 aa16.5■□□□□ 0.23
ATG4B-222ENST00000491867 CHMP4BP1P59074 171 aa16.5■□□□□ 0.23
ATG4B-222ENST00000491867 SNAP25P60880 206 aa16.5■□□□□ 0.23
ATG4B-222ENST00000491867 ZP2Q05996 745 aa16.5■□□□□ 0.23
ATG4B-222ENST00000491867 GPNMBQ14956 572 aa16.5■□□□□ 0.23
ATG4B-222ENST00000491867 UBE3CQ15386 1083 aa16.5■□□□□ 0.23
ATG4B-222ENST00000491867 LRRFIP1Q32MZ4 808 aaKnown RBP16.5■□□□□ 0.23
ATG4B-222ENST00000491867 SBK1Q52WX2 424 aa16.5■□□□□ 0.23
ATG4B-222ENST00000491867 NSMFQ6X4W1 530 aa16.5■□□□□ 0.23
ATG4B-222ENST00000491867 ITPRIPQ8IWB1 547 aa16.5■□□□□ 0.23
ATG4B-222ENST00000491867 FTSJ3Q8IY81 847 aaKnown RBP16.5■□□□□ 0.23
ATG4B-222ENST00000491867 CLASRPQ8N2M8 674 aaKnown RBP16.5■□□□□ 0.23
ATG4B-222ENST00000491867 NEK9Q8TD19 979 aa16.5■□□□□ 0.23
ATG4B-222ENST00000491867 CHURC1Q8WUH1 139 aa16.5■□□□□ 0.23
ATG4B-222ENST00000491867 MFSD14AQ96MC6 490 aa16.5■□□□□ 0.23
ATG4B-222ENST00000491867 CRBNQ96SW2 442 aa16.5■□□□□ 0.23
ATG4B-222ENST00000491867 PUS7LQ9H0K6 701 aaKnown RBP16.5■□□□□ 0.23
ATG4B-222ENST00000491867 BOLA2Q9H3K6 86 aa16.5■□□□□ 0.23
ATG4B-222ENST00000491867 TTLL1O95922 423 aa16.49■□□□□ 0.23
ATG4B-222ENST00000491867 BRDTQ58F21 947 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-222ENST00000491867 HSP90AB4PQ58FF6 505 aa16.49■□□□□ 0.23
ATG4B-222ENST00000491867 FAM117BQ6P1L5 589 aa16.49■□□□□ 0.23
ATG4B-222ENST00000491867 FAM160B2Q86V87 743 aa16.49■□□□□ 0.23
ATG4B-222ENST00000491867 FBXO22Q8NEZ5 403 aa16.49■□□□□ 0.23
ATG4B-222ENST00000491867 SYNPO2Q9UMS6 1093 aa16.49■□□□□ 0.23
ATG4B-222ENST00000491867 ST18O60284 1047 aa16.48■□□□□ 0.23
ATG4B-222ENST00000491867 KPNA6O60684 536 aa16.48■□□□□ 0.23
ATG4B-222ENST00000491867 PRDM1O75626 825 aa16.48■□□□□ 0.23
ATG4B-222ENST00000491867 RLBP1P12271 317 aa16.48■□□□□ 0.23
ATG4B-222ENST00000491867 PTPN11Q06124 597 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-222ENST00000491867 PTGISQ16647 500 aa16.48■□□□□ 0.23
ATG4B-222ENST00000491867 TCTN1Q2MV58 587 aa16.48■□□□□ 0.23
ATG4B-222ENST00000491867 CNKSR3Q6P9H4 555 aa16.48■□□□□ 0.23
ATG4B-222ENST00000491867 EP400NLQ6ZTU2 488 aa16.48■□□□□ 0.23
ATG4B-222ENST00000491867 ZNF444Q8N0Y2 327 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-222ENST00000491867 CCDC155Q8N6L0 562 aa16.48■□□□□ 0.23
ATG4B-222ENST00000491867 AFAP1L1Q8TED9 768 aa16.48■□□□□ 0.23
ATG4B-222ENST00000491867 STAG1Q8WVM7 1258 aa16.48■□□□□ 0.23
ATG4B-222ENST00000491867 MRPL38Q96DV4 380 aaKnown RBP16.48■□□□□ 0.23
ATG4B-222ENST00000491867 C17orf80Q9BSJ5 609 aa16.48■□□□□ 0.23
ATG4B-222ENST00000491867 FAM186AA6NE01 2351 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms