RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 TKFCQ3LXA3 575 aa24.9■■□□□ 1.58
VCPKMT-204ENST00000491402 FOXD4L6Q3SYB3 417 aaPredicted RBP24.9■■□□□ 1.58
VCPKMT-204ENST00000491402 FAM173BQ6P4H8 233 aa24.9■■□□□ 1.58
VCPKMT-204ENST00000491402 USP17L6PQ6QN14 398 aa24.9■■□□□ 1.58
VCPKMT-204ENST00000491402 FOXD4L3Q6VB84 417 aaPredicted RBP24.9■■□□□ 1.58
VCPKMT-204ENST00000491402 RIOX2Q8IUF8 465 aa24.9■■□□□ 1.58
VCPKMT-204ENST00000491402 BIN2Q9UBW5 565 aaPredicted RBP24.9■■□□□ 1.58
VCPKMT-204ENST00000491402 PIK3CDO00329 1044 aa24.89■■□□□ 1.57
VCPKMT-204ENST00000491402 CFBP00751 764 aa24.89■■□□□ 1.57
VCPKMT-204ENST00000491402 HSPA1AP0DMV8 641 aaKnown RBP24.89■■□□□ 1.57
VCPKMT-204ENST00000491402 HSPA1BP0DMV9 641 aaKnown RBP24.89■■□□□ 1.57
VCPKMT-204ENST00000491402 ERVK-9P63128 1117 aa24.89■■□□□ 1.57
VCPKMT-204ENST00000491402 ERVK-24P63145 666 aa24.89■■□□□ 1.57
VCPKMT-204ENST00000491402 NOM1Q5C9Z4 860 aaKnown RBP24.89■■□□□ 1.57
VCPKMT-204ENST00000491402 EARS2Q5JPH6 523 aaKnown RBP24.89■■□□□ 1.57
VCPKMT-204ENST00000491402 TEX2Q8IWB9 1127 aa24.89■■□□□ 1.57
VCPKMT-204ENST00000491402 BCRP11274 1271 aa24.88■■□□□ 1.57
VCPKMT-204ENST00000491402 Q3C1V9 767 aa24.88■■□□□ 1.57
VCPKMT-204ENST00000491402 JAKMIP3Q5VZ66 844 aa24.88■■□□□ 1.57
VCPKMT-204ENST00000491402 TBC1D5Q92609 795 aa24.88■■□□□ 1.57
VCPKMT-204ENST00000491402 MOV10L1Q9BXT6 1211 aaKnown RBP24.88■■□□□ 1.57
VCPKMT-204ENST00000491402 TMEM260Q9NX78 707 aa24.88■■□□□ 1.57
VCPKMT-204ENST00000491402 FAM205CA6NFA0 338 aa24.88■■□□□ 1.57
VCPKMT-204ENST00000491402 FOXN1O15353 648 aa24.88■■□□□ 1.57
VCPKMT-204ENST00000491402 PIK3AP1Q6ZUJ8 805 aa24.88■■□□□ 1.57
VCPKMT-204ENST00000491402 MCF2L2Q86YR7 1114 aa24.88■■□□□ 1.57
VCPKMT-204ENST00000491402 ACAD9Q9H845 621 aa24.88■■□□□ 1.57
VCPKMT-204ENST00000491402 CCDC194A0A1B0GVG4 234 aa24.87■■□□□ 1.57
VCPKMT-204ENST00000491402 GCOM1H8Y6P7 765 aaPredicted RBP24.87■■□□□ 1.57
VCPKMT-204ENST00000491402 GPR25O00155 361 aa24.87■■□□□ 1.57
VCPKMT-204ENST00000491402 POLR2MP0CAP2 368 aa24.87■■□□□ 1.57
VCPKMT-204ENST00000491402 HOXA13P31271 388 aaPredicted RBP24.87■■□□□ 1.57
VCPKMT-204ENST00000491402 MYSM1Q5VVJ2 828 aa24.87■■□□□ 1.57
VCPKMT-204ENST00000491402 CHST13Q8NET6 341 aa24.87■■□□□ 1.57
VCPKMT-204ENST00000491402 GPRC5AQ8NFJ5 357 aa24.87■■□□□ 1.57
VCPKMT-204ENST00000491402 MORF4L1Q9UBU8 362 aa24.87■■□□□ 1.57
VCPKMT-204ENST00000491402 HSD17B4P51659 736 aa24.86■■□□□ 1.57
VCPKMT-204ENST00000491402 GHRHRQ02643 423 aa24.86■■□□□ 1.57
VCPKMT-204ENST00000491402 KRT25Q7Z3Z0 450 aa24.86■■□□□ 1.57
VCPKMT-204ENST00000491402 CHAMP1Q96JM3 812 aa24.86■■□□□ 1.57
VCPKMT-204ENST00000491402 ECM2O94769 699 aaPredicted RBP24.85■■□□□ 1.57
VCPKMT-204ENST00000491402 SLC25A27O95847 323 aa24.85■■□□□ 1.57
VCPKMT-204ENST00000491402 AP3B2Q13367 1082 aa24.85■■□□□ 1.57
VCPKMT-204ENST00000491402 FAM110CQ1W6H9 321 aa24.85■■□□□ 1.57
VCPKMT-204ENST00000491402 NCAPG2Q86XI2 1143 aa24.85■■□□□ 1.57
VCPKMT-204ENST00000491402 MYH7BA7E2Y1 1941 aa24.85■■□□□ 1.57
VCPKMT-204ENST00000491402 ERCC3P19447 782 aa24.85■■□□□ 1.57
VCPKMT-204ENST00000491402 COPB2P35606 906 aa24.85■■□□□ 1.57
VCPKMT-204ENST00000491402 DNM1Q05193 864 aaKnown RBP24.85■■□□□ 1.57
VCPKMT-204ENST00000491402 PGBD1Q96JS3 809 aa24.85■■□□□ 1.57
VCPKMT-204ENST00000491402 MAP3K20Q9NYL2 800 aaKnown RBP24.85■■□□□ 1.57
VCPKMT-204ENST00000491402 FBXO40Q9UH90 709 aa24.85■■□□□ 1.57
VCPKMT-204ENST00000491402 RPS6P62753 249 aaKnown RBP24.84■■□□□ 1.57
VCPKMT-204ENST00000491402 SP3Q02447 781 aa24.84■■□□□ 1.57
VCPKMT-204ENST00000491402 NSMFQ6X4W1 530 aa24.84■■□□□ 1.57
VCPKMT-204ENST00000491402 SAMD3Q8N6K7 520 aa24.84■■□□□ 1.57
VCPKMT-204ENST00000491402 SPDYE3A6NKU9 549 aa24.83■■□□□ 1.57
VCPKMT-204ENST00000491402 CCNA1P78396 465 aa24.83■■□□□ 1.57
VCPKMT-204ENST00000491402 NONOQ15233 471 aaKnown RBP eCLIP24.83■■□□□ 1.57
VCPKMT-204ENST00000491402 RILPL1Q5EBL4 403 aa24.83■■□□□ 1.57
VCPKMT-204ENST00000491402 MCTP2Q6DN12 878 aa24.83■■□□□ 1.57
VCPKMT-204ENST00000491402 RNF207Q6ZRF8 634 aa24.83■■□□□ 1.57
VCPKMT-204ENST00000491402 ZNF296Q8WUU4 475 aaPredicted RBP24.83■■□□□ 1.57
VCPKMT-204ENST00000491402 A1CFQ9NQ94 594 aaKnown RBP24.83■■□□□ 1.57
VCPKMT-204ENST00000491402 FOSP01100 380 aaPredicted RBP24.82■■□□□ 1.56
VCPKMT-204ENST00000491402 INF2Q27J81 1249 aa24.82■■□□□ 1.56
VCPKMT-204ENST00000491402 SLC30A10Q6XR72 485 aa24.82■■□□□ 1.56
VCPKMT-204ENST00000491402 FCHSD1Q86WN1 690 aa24.82■■□□□ 1.56
VCPKMT-204ENST00000491402 SHCBP1Q8NEM2 672 aa24.82■■□□□ 1.56
VCPKMT-204ENST00000491402 ANO3Q9BYT9 981 aa24.82■■□□□ 1.56
VCPKMT-204ENST00000491402 PORCNQ9H237 461 aa24.82■■□□□ 1.56
VCPKMT-204ENST00000491402 HSPA8P11142 646 aaKnown RBP24.82■■□□□ 1.56
VCPKMT-204ENST00000491402 TOB1P50616 345 aaPredicted RBP24.82■■□□□ 1.56
VCPKMT-204ENST00000491402 CLEC17AQ6ZS10 378 aa24.82■■□□□ 1.56
VCPKMT-204ENST00000491402 TBCKQ8TEA7 893 aa24.82■■□□□ 1.56
VCPKMT-204ENST00000491402 MAF1Q9H063 256 aa24.82■■□□□ 1.56
VCPKMT-204ENST00000491402 MROH8Q9H579 483 aa24.82■■□□□ 1.56
VCPKMT-204ENST00000491402 LCTP09848 1927 aa24.81■■□□□ 1.56
VCPKMT-204ENST00000491402 FKTNO75072 461 aa24.81■■□□□ 1.56
VCPKMT-204ENST00000491402 BAG4O95429 457 aaKnown RBP24.81■■□□□ 1.56
VCPKMT-204ENST00000491402 BAATQ14032 418 aaPredicted RBP24.81■■□□□ 1.56
VCPKMT-204ENST00000491402 EFCC1Q9HA90 598 aa24.81■■□□□ 1.56
VCPKMT-204ENST00000491402 CYP39A1Q9NYL5 469 aa24.81■■□□□ 1.56
VCPKMT-204ENST00000491402 COL20A1Q9P218 1284 aa24.81■■□□□ 1.56
VCPKMT-204ENST00000491402 NOL7Q9UMY1 257 aaKnown RBP24.81■■□□□ 1.56
VCPKMT-204ENST00000491402 TRAPPC10P48553 1259 aa24.8■■□□□ 1.56
VCPKMT-204ENST00000491402 CTCFP49711 727 aaPredicted RBP24.8■■□□□ 1.56
VCPKMT-204ENST00000491402 LBX1P52954 281 aa24.8■■□□□ 1.56
VCPKMT-204ENST00000491402 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.8■■□□□ 1.56
VCPKMT-204ENST00000491402 SYTL5Q8TDW5 730 aaPredicted RBP24.8■■□□□ 1.56
VCPKMT-204ENST00000491402 ZNF396Q96N95 335 aaPredicted RBP24.8■■□□□ 1.56
VCPKMT-204ENST00000491402 FTOQ9C0B1 505 aaKnown RBP eCLIP24.8■■□□□ 1.56
VCPKMT-204ENST00000491402 PLXNB2O15031 1838 aa24.8■■□□□ 1.56
VCPKMT-204ENST00000491402 KRT85P78386 507 aa24.8■■□□□ 1.56
VCPKMT-204ENST00000491402 LACTBP83111 547 aaPredicted RBP24.8■■□□□ 1.56
VCPKMT-204ENST00000491402 ATL3Q6DD88 541 aa24.8■■□□□ 1.56
VCPKMT-204ENST00000491402 ANKRD35Q8N283 1001 aa24.8■■□□□ 1.56
VCPKMT-204ENST00000491402 USP28Q96RU2 1077 aa24.8■■□□□ 1.56
VCPKMT-204ENST00000491402 NCLP19338 710 aaKnown RBP24.79■■□□□ 1.56
VCPKMT-204ENST00000491402 NBR1Q14596 966 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms