RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 NYAP2Q9P242 653 aa10.15□□□□□ -0.78
CMSS1-206ENST00000491299 ISY1Q9ULR0 285 aaKnown RBP10.15□□□□□ -0.78
CMSS1-206ENST00000491299 CTDP1Q9Y5B0 961 aaPredicted RBP10.15□□□□□ -0.78
CMSS1-206ENST00000491299 A0A0G2JMZ2 1700 aa10.15□□□□□ -0.78
CMSS1-206ENST00000491299 COL11A1P12107 1806 aaPredicted RBP10.14□□□□□ -0.79
CMSS1-206ENST00000491299 CCDC171Q6TFL3 1326 aa10.14□□□□□ -0.79
CMSS1-206ENST00000491299 A0A0D9SFI3 127 aa10.14□□□□□ -0.79
CMSS1-206ENST00000491299 PEX10O60683 326 aa10.14□□□□□ -0.79
CMSS1-206ENST00000491299 TTLL1O95922 423 aa10.14□□□□□ -0.79
CMSS1-206ENST00000491299 GJB1P08034 283 aa10.14□□□□□ -0.79
CMSS1-206ENST00000491299 XRCC5P13010 732 aaKnown RBP10.14□□□□□ -0.79
CMSS1-206ENST00000491299 CAPN2P17655 700 aa10.14□□□□□ -0.79
CMSS1-206ENST00000491299 GRM5P41594 1212 aa10.14□□□□□ -0.79
CMSS1-206ENST00000491299 PTK2Q05397 1052 aa10.14□□□□□ -0.79
CMSS1-206ENST00000491299 NR5A1Q13285 461 aa10.14□□□□□ -0.79
CMSS1-206ENST00000491299 NMIQ13287 307 aaPredicted RBP10.14□□□□□ -0.79
CMSS1-206ENST00000491299 FAM227BQ96M60 508 aa10.14□□□□□ -0.79
CMSS1-206ENST00000491299 APBA2Q99767 749 aa10.14□□□□□ -0.79
CMSS1-206ENST00000491299 SLC5A4Q9NY91 659 aa10.14□□□□□ -0.79
CMSS1-206ENST00000491299 CLIP2Q9UDT6 1046 aa10.14□□□□□ -0.79
CMSS1-206ENST00000491299 SYNPO2Q9UMS6 1093 aa10.14□□□□□ -0.79
CMSS1-206ENST00000491299 MAP4K5Q9Y4K4 846 aa10.14□□□□□ -0.79
CMSS1-206ENST00000491299 PLIN4Q96Q06 1357 aa10.14□□□□□ -0.79
CMSS1-206ENST00000491299 RLFQ13129 1914 aa10.13□□□□□ -0.79
CMSS1-206ENST00000491299 RANBP6O60518 1105 aaKnown RBP10.13□□□□□ -0.79
CMSS1-206ENST00000491299 CNMDO75829 334 aa10.13□□□□□ -0.79
CMSS1-206ENST00000491299 HSPD1P10809 573 aaKnown RBP10.13□□□□□ -0.79
CMSS1-206ENST00000491299 SDSP20132 328 aa10.13□□□□□ -0.79
CMSS1-206ENST00000491299 GJA8P48165 433 aa10.13□□□□□ -0.79
CMSS1-206ENST00000491299 TFAP4Q01664 338 aa10.13□□□□□ -0.79
CMSS1-206ENST00000491299 FAM47AQ5JRC9 791 aa10.13□□□□□ -0.79
CMSS1-206ENST00000491299 FAM83BQ5T0W9 1011 aa10.13□□□□□ -0.79
CMSS1-206ENST00000491299 CWC27Q6UX04 472 aaKnown RBP10.13□□□□□ -0.79
CMSS1-206ENST00000491299 NCAPG2Q86XI2 1143 aa10.13□□□□□ -0.79
CMSS1-206ENST00000491299 SIAH1Q8IUQ4 282 aa10.13□□□□□ -0.79
CMSS1-206ENST00000491299 NEDD1Q8NHV4 660 aa10.13□□□□□ -0.79
CMSS1-206ENST00000491299 ZNF775Q96BV0 537 aaPredicted RBP10.13□□□□□ -0.79
CMSS1-206ENST00000491299 CEP95Q96GE4 821 aa10.13□□□□□ -0.79
CMSS1-206ENST00000491299 SPATC1LQ9H0A9 340 aa10.13□□□□□ -0.79
CMSS1-206ENST00000491299 BTBD7Q9P203 1132 aa10.13□□□□□ -0.79
CMSS1-206ENST00000491299 GJD2Q9UKL4 321 aa10.13□□□□□ -0.79
CMSS1-206ENST00000491299 STX8Q9UNK0 236 aa10.13□□□□□ -0.79
CMSS1-206ENST00000491299 ZMYM6O95789 1325 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 RPTORQ8N122 1335 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 TNRC18O15417 2968 aaPredicted RBP10.12□□□□□ -0.79
CMSS1-206ENST00000491299 SLC15A5A6NIM6 579 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 F5H6K3 240 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 STRNO43815 780 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 ZIC2O95409 532 aaPredicted RBP10.12□□□□□ -0.79
CMSS1-206ENST00000491299 SLC25A27O95847 323 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 TFRCP02786 760 aaKnown RBP10.12□□□□□ -0.79
CMSS1-206ENST00000491299 GSPT1P15170 499 aaKnown RBP10.12□□□□□ -0.79
CMSS1-206ENST00000491299 COPB2P35606 906 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 KLRC3Q07444 240 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 ALX1Q15699 326 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 RRP12Q5JTH9 1297 aaKnown RBP10.12□□□□□ -0.79
CMSS1-206ENST00000491299 KIAA1755Q5JYT7 1200 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 VPS53Q5VIR6 699 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 TRIM46Q7Z4K8 759 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 DPP9Q86TI2 863 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 SHCBP1Q8NEM2 672 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 ADAM32Q8TC27 787 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 U2AF1L4Q8WU68 220 aaKnown RBP10.12□□□□□ -0.79
CMSS1-206ENST00000491299 TRIB2Q92519 343 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 ATG4CQ96DT6 458 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 ITPKCQ96DU7 683 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 DEFB118Q96PH6 123 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 SLF1Q9BQI6 1058 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 OCSTAMPQ9BR26 566 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 MOV10L1Q9BXT6 1211 aaKnown RBP10.12□□□□□ -0.79
CMSS1-206ENST00000491299 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.12□□□□□ -0.79
CMSS1-206ENST00000491299 RNF41Q9H4P4 317 aaPredicted RBP10.12□□□□□ -0.79
CMSS1-206ENST00000491299 MROH8Q9H579 483 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 SENP2Q9HC62 589 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 MTMR4Q9NYA4 1195 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 ANAPC4Q9UJX5 808 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 PPP1R9AQ9ULJ8 1098 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 ZNF236Q9UL36 1845 aa10.12□□□□□ -0.79
CMSS1-206ENST00000491299 IGKV6D-41A0A0C4DH26 115 aa10.11□□□□□ -0.79
CMSS1-206ENST00000491299 SGPL1O95470 568 aa10.11□□□□□ -0.79
CMSS1-206ENST00000491299 NDUFB10O96000 172 aa10.11□□□□□ -0.79
CMSS1-206ENST00000491299 FGAP02671 866 aa10.11□□□□□ -0.79
CMSS1-206ENST00000491299 PCP11498 1178 aaKnown RBP10.11□□□□□ -0.79
CMSS1-206ENST00000491299 SNRPBP14678 240 aaKnown RBP10.11□□□□□ -0.79
CMSS1-206ENST00000491299 ERCC3P19447 782 aa10.11□□□□□ -0.79
CMSS1-206ENST00000491299 IKQ13123 557 aaPredicted RBP10.11□□□□□ -0.79
CMSS1-206ENST00000491299 GRB14Q14449 540 aa10.11□□□□□ -0.79
CMSS1-206ENST00000491299 TTC22Q5TAA0 569 aa10.11□□□□□ -0.79
CMSS1-206ENST00000491299 MFSD14CQ5VZR4 134 aa10.11□□□□□ -0.79
CMSS1-206ENST00000491299 MFSD6Q6ZSS7 791 aa10.11□□□□□ -0.79
CMSS1-206ENST00000491299 ZNF589Q86UQ0 364 aaPredicted RBP10.11□□□□□ -0.79
CMSS1-206ENST00000491299 LRRC47Q8N1G4 583 aaKnown RBP10.11□□□□□ -0.79
CMSS1-206ENST00000491299 PRPF38AQ8NAV1 312 aaKnown RBP10.11□□□□□ -0.79
CMSS1-206ENST00000491299 GMCL1P1Q8NEA9 526 aa10.11□□□□□ -0.79
CMSS1-206ENST00000491299 MKL1Q969V6 931 aa10.11□□□□□ -0.79
CMSS1-206ENST00000491299 HTATIP2Q9BUP3 242 aa10.11□□□□□ -0.79
CMSS1-206ENST00000491299 ZFAND3Q9H8U3 227 aa10.11□□□□□ -0.79
CMSS1-206ENST00000491299 PAK6Q9NQU5 681 aaPredicted RBP10.11□□□□□ -0.79
CMSS1-206ENST00000491299 GPSM3Q9Y4H4 160 aa10.11□□□□□ -0.79
CMSS1-206ENST00000491299 LAMA4Q16363 1823 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms