RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 ICAM1P05362 532 aa24.44■■□□□ 1.5
CLIP2-208ENST00000491075 SUPT20HL2P0C7V6 817 aa24.44■■□□□ 1.5
CLIP2-208ENST00000491075 ATP2A2P16615 1042 aaKnown RBP24.44■■□□□ 1.5
CLIP2-208ENST00000491075 PWP2Q15269 919 aaKnown RBP24.44■■□□□ 1.5
CLIP2-208ENST00000491075 ZMYM1Q5SVZ6 1142 aa24.44■■□□□ 1.5
CLIP2-208ENST00000491075 TMEM63BQ5T3F8 832 aa24.44■■□□□ 1.5
CLIP2-208ENST00000491075 SCLYQ96I15 445 aa24.44■■□□□ 1.5
CLIP2-208ENST00000491075 VWCEQ96DN2 955 aa24.43■■□□□ 1.5
CLIP2-208ENST00000491075 IL17RBQ9NRM6 502 aa24.43■■□□□ 1.5
CLIP2-208ENST00000491075 SCN10AQ9Y5Y9 1956 aa24.43■■□□□ 1.5
CLIP2-208ENST00000491075 TNKSO95271 1327 aa24.42■■□□□ 1.5
CLIP2-208ENST00000491075 TCF20Q9UGU0 1960 aaKnown RBP24.42■■□□□ 1.5
CLIP2-208ENST00000491075 NMT2O60551 498 aa24.42■■□□□ 1.5
CLIP2-208ENST00000491075 CPT1AP50416 773 aa24.42■■□□□ 1.5
CLIP2-208ENST00000491075 CCDC96Q2M329 555 aa24.42■■□□□ 1.5
CLIP2-208ENST00000491075 RASGRP2Q7LDG7 609 aa24.42■■□□□ 1.5
CLIP2-208ENST00000491075 PI4K2BQ8TCG2 481 aa24.42■■□□□ 1.5
CLIP2-208ENST00000491075 DCAF4Q8WV16 495 aa24.42■■□□□ 1.5
CLIP2-208ENST00000491075 RANBP17Q9H2T7 1088 aaKnown RBP24.42■■□□□ 1.5
CLIP2-208ENST00000491075 MYOGP15173 224 aa24.41■■□□□ 1.5
CLIP2-208ENST00000491075 ALDH5A1P51649 535 aaPredicted RBP24.41■■□□□ 1.5
CLIP2-208ENST00000491075 PURAQ00577 322 aaKnown RBP24.41■■□□□ 1.5
CLIP2-208ENST00000491075 MICALL1Q8N3F8 863 aa24.41■■□□□ 1.5
CLIP2-208ENST00000491075 PURBQ96QR8 312 aaKnown RBP24.41■■□□□ 1.5
CLIP2-208ENST00000491075 WDR11Q9BZH6 1224 aa24.41■■□□□ 1.5
CLIP2-208ENST00000491075 TRMT13Q9NUP7 481 aaKnown RBP24.41■■□□□ 1.5
CLIP2-208ENST00000491075 CYP2C9P11712 490 aa24.4■■□□□ 1.5
CLIP2-208ENST00000491075 NOVP48745 357 aa24.4■■□□□ 1.5
CLIP2-208ENST00000491075 CTDSPL2Q05D32 466 aa24.4■■□□□ 1.5
CLIP2-208ENST00000491075 BAATQ14032 418 aaPredicted RBP24.4■■□□□ 1.5
CLIP2-208ENST00000491075 TTLL4Q14679 1199 aa24.4■■□□□ 1.5
CLIP2-208ENST00000491075 AAK1Q2M2I8 961 aa24.4■■□□□ 1.5
CLIP2-208ENST00000491075 MTMR7Q9Y216 660 aa24.4■■□□□ 1.5
CLIP2-208ENST00000491075 FOXP2O15409 715 aa24.39■■□□□ 1.49
CLIP2-208ENST00000491075 RANBP6O60518 1105 aaKnown RBP24.39■■□□□ 1.49
CLIP2-208ENST00000491075 ACTN1P12814 892 aa24.39■■□□□ 1.49
CLIP2-208ENST00000491075 TMEM67Q5HYA8 995 aa24.39■■□□□ 1.49
CLIP2-208ENST00000491075 BTNL9Q6UXG8 535 aa24.39■■□□□ 1.49
CLIP2-208ENST00000491075 MTG1Q9BT17 334 aaPredicted RBP24.39■■□□□ 1.49
CLIP2-208ENST00000491075 GPHNQ9NQX3 736 aaPredicted RBP24.39■■□□□ 1.49
CLIP2-208ENST00000491075 ANAPC4Q9UJX5 808 aa24.39■■□□□ 1.49
CLIP2-208ENST00000491075 RAD50Q92878 1312 aa24.38■■□□□ 1.49
CLIP2-208ENST00000491075 RBM47A0AV96 593 aaKnown RBP24.38■■□□□ 1.49
CLIP2-208ENST00000491075 NFIBO00712 420 aa24.38■■□□□ 1.49
CLIP2-208ENST00000491075 MYL3P08590 195 aa24.38■■□□□ 1.49
CLIP2-208ENST00000491075 RFC2P35250 354 aa24.38■■□□□ 1.49
CLIP2-208ENST00000491075 BRDTQ58F21 947 aaPredicted RBP24.38■■□□□ 1.49
CLIP2-208ENST00000491075 DEFB128Q7Z7B8 93 aa24.38■■□□□ 1.49
CLIP2-208ENST00000491075 OR6J1Q8NGC5 347 aa24.38■■□□□ 1.49
CLIP2-208ENST00000491075 SLC9A7Q96T83 725 aa24.38■■□□□ 1.49
CLIP2-208ENST00000491075 PRRC2BQ5JSZ5 2229 aaKnown RBP24.37■■□□□ 1.49
CLIP2-208ENST00000491075 PTPDC1A2A3K4 754 aa24.37■■□□□ 1.49
CLIP2-208ENST00000491075 GTPBP6O43824 516 aaPredicted RBP24.37■■□□□ 1.49
CLIP2-208ENST00000491075 ORC4O43929 436 aa24.37■■□□□ 1.49
CLIP2-208ENST00000491075 CA3P07451 260 aa24.37■■□□□ 1.49
CLIP2-208ENST00000491075 BMP1P13497 986 aa24.37■■□□□ 1.49
CLIP2-208ENST00000491075 POU3F3P20264 500 aaPredicted RBP24.37■■□□□ 1.49
CLIP2-208ENST00000491075 SYDE2Q5VT97 1194 aa24.37■■□□□ 1.49
CLIP2-208ENST00000491075 INCENPQ9NQS7 918 aa24.37■■□□□ 1.49
CLIP2-208ENST00000491075 PNMA2Q9UL42 364 aa24.37■■□□□ 1.49
CLIP2-208ENST00000491075 PITPNM1O00562 1244 aa24.36■■□□□ 1.49
CLIP2-208ENST00000491075 NKRFO15226 690 aaKnown RBP eCLIP24.36■■□□□ 1.49
CLIP2-208ENST00000491075 SLC16A2P36021 539 aa24.36■■□□□ 1.49
CLIP2-208ENST00000491075 PPP2R5BQ15173 497 aa24.36■■□□□ 1.49
CLIP2-208ENST00000491075 FAM47CQ5HY64 1035 aa24.36■■□□□ 1.49
CLIP2-208ENST00000491075 DIEXFQ68CQ4 756 aaKnown RBP24.36■■□□□ 1.49
CLIP2-208ENST00000491075 TTBK2Q6IQ55 1244 aa24.36■■□□□ 1.49
CLIP2-208ENST00000491075 NFRKBQ6P4R8 1299 aa24.36■■□□□ 1.49
CLIP2-208ENST00000491075 MPHOSPH6Q99547 160 aaKnown RBP24.36■■□□□ 1.49
CLIP2-208ENST00000491075 RAPGEFL1Q9UHV5 662 aa24.36■■□□□ 1.49
CLIP2-208ENST00000491075 KPNA6O60684 536 aa24.35■■□□□ 1.49
CLIP2-208ENST00000491075 TFF2Q03403 129 aa24.35■■□□□ 1.49
CLIP2-208ENST00000491075 SKIV2LQ15477 1246 aaKnown RBP24.35■■□□□ 1.49
CLIP2-208ENST00000491075 NBPF20Q3BBV1 942 aa24.35■■□□□ 1.49
CLIP2-208ENST00000491075 SLC30A10Q6XR72 485 aa24.35■■□□□ 1.49
CLIP2-208ENST00000491075 PHOSPHO2Q8TCD6 241 aa24.35■■□□□ 1.49
CLIP2-208ENST00000491075 MTCH2Q9Y6C9 303 aa24.35■■□□□ 1.49
CLIP2-208ENST00000491075 TOP1P11387 765 aaKnown RBP24.34■■□□□ 1.49
CLIP2-208ENST00000491075 MX1P20591 662 aa24.34■■□□□ 1.49
CLIP2-208ENST00000491075 PTPN11Q06124 597 aaPredicted RBP24.34■■□□□ 1.49
CLIP2-208ENST00000491075 PDE4DQ08499 809 aa24.34■■□□□ 1.49
CLIP2-208ENST00000491075 OTUD7AQ8TE49 926 aaPredicted RBP24.34■■□□□ 1.49
CLIP2-208ENST00000491075 SCFD2Q8WU76 684 aa24.34■■□□□ 1.49
CLIP2-208ENST00000491075 NECAB3Q96P71 396 aaPredicted RBP24.34■■□□□ 1.49
CLIP2-208ENST00000491075 FGRP09769 529 aa24.33■■□□□ 1.49
CLIP2-208ENST00000491075 CALML3P27482 149 aa24.33■■□□□ 1.49
CLIP2-208ENST00000491075 RNF207Q6ZRF8 634 aa24.33■■□□□ 1.49
CLIP2-208ENST00000491075 RETREG2Q8NC44 543 aa24.33■■□□□ 1.49
CLIP2-208ENST00000491075 CLEC4DQ8WXI8 215 aa24.33■■□□□ 1.49
CLIP2-208ENST00000491075 C1QTNF1Q9BXJ1 281 aa24.33■■□□□ 1.49
CLIP2-208ENST00000491075 TOMM22Q9NS69 142 aa24.33■■□□□ 1.49
CLIP2-208ENST00000491075 COL4A4P53420 1690 aaPredicted RBP24.33■■□□□ 1.49
CLIP2-208ENST00000491075 FRMPD2Q68DX3 1309 aaPredicted RBP24.33■■□□□ 1.48
CLIP2-208ENST00000491075 PTPRSQ13332 1948 aa24.32■■□□□ 1.48
CLIP2-208ENST00000491075 A6NJR5 290 aa24.32■■□□□ 1.48
CLIP2-208ENST00000491075 IQCF3P0C7M6 154 aa24.32■■□□□ 1.48
CLIP2-208ENST00000491075 EDNRBP24530 442 aa24.32■■□□□ 1.48
CLIP2-208ENST00000491075 PLA2G5P39877 138 aa24.32■■□□□ 1.48
CLIP2-208ENST00000491075 KCNQ1P51787 676 aa24.32■■□□□ 1.48
CLIP2-208ENST00000491075 BFSP2Q13515 415 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms