RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 DMGDHQ9UI17 866 aaKnown RBP12.4□□□□□ -0.43
CRNKL1-204ENST00000490910 FBXO2Q9UK22 296 aaPredicted RBP12.4□□□□□ -0.43
CRNKL1-204ENST00000490910 AMFRQ9UKV5 643 aa12.4□□□□□ -0.43
CRNKL1-204ENST00000490910 LETM2Q2VYF4 491 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 SEL1L2Q5TEA6 688 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 LSM14BQ9BX40 385 aaKnown RBP12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 UBXN6Q9BZV1 441 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 ADGRB3O60242 1522 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 TRIM49BA6NDI0 452 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 EVI5O60447 810 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 NAPAP54920 295 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 SLC8A3P57103 927 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 EVA1CP58658 441 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 PAPD7Q5XG87 772 aaKnown RBP12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 KRT26Q7Z3Y9 468 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 ZNF444Q8N0Y2 327 aaPredicted RBP12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 VPS52Q8N1B4 723 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 SMC6Q96SB8 1091 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 TEX13AQ9BXU3 409 aaPredicted RBP12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 RNF26Q9BY78 433 aaPredicted RBP12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 VAT1LQ9HCJ6 419 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 PDE6CP51160 858 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 POLR2FP61218 127 aaKnown RBP12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 CUL4BQ13620 913 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 SH2D4BQ5SQS7 431 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 CEP128Q6ZU80 1094 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 KCNV2Q8TDN2 545 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 PUS7LQ9H0K6 701 aaKnown RBP12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 ATG3Q9NT62 314 aa12.39□□□□□ -0.43
CRNKL1-204ENST00000490910 RASSF10A6NK89 507 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 CCNE1P24864 410 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 LIFRP42702 1097 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 CARSP49589 748 aaKnown RBP12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 MAP7Q14244 749 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 FYB2Q5VWT5 728 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 DYMQ7RTS9 669 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 ELOA2Q8IYF1 753 aaPredicted RBP12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 RNF168Q8IYW5 571 aaPredicted RBP12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 IFNL3Q8IZI9 196 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 FMO2Q99518 471 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 TFR2Q9UP52 801 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 PRCPP42785 496 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 EPHA10Q5JZY3 1008 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 NEK9Q8TD19 979 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 PHF20L1A8MW92 1017 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 RANBP1P43487 201 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 CETN1Q12798 172 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 PDCD2Q16342 344 aaPredicted RBP12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 TBC1D22AQ8WUA7 517 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 PBKQ96KB5 322 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 OSBPL1AQ9BXW6 950 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 STX8Q9UNK0 236 aa12.38□□□□□ -0.43
CRNKL1-204ENST00000490910 WDR19Q8NEZ3 1342 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 PDHA1P08559 390 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 TMOD1P28289 359 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 SKOR1P84550 965 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 DDR1Q08345 913 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 FAM69CQ0P6D2 419 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 RCSD1Q6JBY9 416 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 CCDC174Q6PII3 467 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 HELBQ8NG08 1087 aaPredicted RBP12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 KAT2BQ92831 832 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 LARSQ9P2J5 1176 aaKnown RBP12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 UBN2Q6ZU65 1347 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 STK36Q9NRP7 1315 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 STARD3NLO95772 234 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 SKIP12755 728 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 SCTRP47872 440 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 MMP14P50281 582 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 PSMD2Q13200 908 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 PTPAQ15257 358 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 CLUL1Q15846 466 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 MAN2A1Q16706 1144 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 CAVIN4Q5BKX8 364 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 DCAF17Q5H9S7 520 aaPredicted RBP12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 PHLDB3Q6NSJ2 640 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 ADAT2Q7Z6V5 191 aaKnown RBP12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 ILDR1Q86SU0 546 aaPredicted RBP12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 CCDC105Q8IYK2 499 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 CRACR2BQ8N4Y2 399 aaPredicted RBP12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 RBM12Q9NTZ6 932 aaKnown RBP12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 TXLNGQ9NUQ3 528 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 DAAM1Q9Y4D1 1078 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 MAGEB6P1A0A0J9YX57 407 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 PFDN1O60925 122 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 PALMO75781 387 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 ATP2A2P16615 1042 aaKnown RBP12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 DZIP3Q86Y13 1208 aaKnown RBP12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 TMEM139Q8IV31 216 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 ARHGAP24Q8N264 748 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 AP1M1Q9BXS5 423 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 SUDS3Q9H7L9 328 aaPredicted RBP12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 C6orf50Q9HD87 102 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 SLC39A2Q9NP94 309 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 INTS13Q9NVM9 706 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 SMARCAL1Q9NZC9 954 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 PRAMEF22A3QJZ6 481 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 PDE6AP16499 860 aa12.37□□□□□ -0.43
CRNKL1-204ENST00000490910 PLTPP55058 493 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms