RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 NEDD4P46934 1319 aa19.56■□□□□ 0.72
SRGAP3-209ENST00000490889 B4GALT4O60513 344 aa19.56■□□□□ 0.72
SRGAP3-209ENST00000490889 SNHG28P0DPA3 235 aa19.56■□□□□ 0.72
SRGAP3-209ENST00000490889 ZNF543Q08ER8 600 aa19.56■□□□□ 0.72
SRGAP3-209ENST00000490889 AKNAD1Q5T1N1 836 aa19.56■□□□□ 0.72
SRGAP3-209ENST00000490889 B4GALNT3Q6L9W6 998 aa19.56■□□□□ 0.72
SRGAP3-209ENST00000490889 TICAM2Q86XR7 235 aa19.56■□□□□ 0.72
SRGAP3-209ENST00000490889 SMC5Q8IY18 1101 aa19.56■□□□□ 0.72
SRGAP3-209ENST00000490889 RILPL2Q969X0 211 aa19.56■□□□□ 0.72
SRGAP3-209ENST00000490889 HIPK3Q9H422 1215 aa19.56■□□□□ 0.72
SRGAP3-209ENST00000490889 ZNF576Q9H609 170 aa19.56■□□□□ 0.72
SRGAP3-209ENST00000490889 CXXC1Q9P0U4 656 aaPredicted RBP19.56■□□□□ 0.72
SRGAP3-209ENST00000490889 PTPDC1A2A3K4 754 aa19.55■□□□□ 0.72
SRGAP3-209ENST00000490889 DUSP28Q4G0W2 176 aa19.55■□□□□ 0.72
SRGAP3-209ENST00000490889 PSRC1Q6PGN9 363 aaPredicted RBP19.55■□□□□ 0.72
SRGAP3-209ENST00000490889 MFSD6Q6ZSS7 791 aa19.55■□□□□ 0.72
SRGAP3-209ENST00000490889 USP38Q8NB14 1042 aa19.55■□□□□ 0.72
SRGAP3-209ENST00000490889 ZKSCAN3Q9BRR0 538 aa19.55■□□□□ 0.72
SRGAP3-209ENST00000490889 WNT8AQ9H1J5 351 aa19.55■□□□□ 0.72
SRGAP3-209ENST00000490889 CPVLQ9H3G5 476 aa19.55■□□□□ 0.72
SRGAP3-209ENST00000490889 IL23AQ9NPF7 189 aa19.55■□□□□ 0.72
SRGAP3-209ENST00000490889 ADD3Q9UEY8 706 aaKnown RBP19.55■□□□□ 0.72
SRGAP3-209ENST00000490889 LAMA4Q16363 1823 aa19.55■□□□□ 0.72
SRGAP3-209ENST00000490889 CHD7Q9P2D1 2997 aa19.55■□□□□ 0.72
SRGAP3-209ENST00000490889 SDSP20132 328 aa19.54■□□□□ 0.72
SRGAP3-209ENST00000490889 CALML3P27482 149 aa19.54■□□□□ 0.72
SRGAP3-209ENST00000490889 CCL23P55773 120 aa19.54■□□□□ 0.72
SRGAP3-209ENST00000490889 VWCEQ96DN2 955 aa19.54■□□□□ 0.72
SRGAP3-209ENST00000490889 NOC4LQ9BVI4 516 aaKnown RBP19.54■□□□□ 0.72
SRGAP3-209ENST00000490889 WDR11Q9BZH6 1224 aa19.54■□□□□ 0.72
SRGAP3-209ENST00000490889 RBM47A0AV96 593 aaKnown RBP19.53■□□□□ 0.72
SRGAP3-209ENST00000490889 ZEB2O60315 1214 aa19.53■□□□□ 0.72
SRGAP3-209ENST00000490889 GOLGA8HP0CJ92 632 aa19.53■□□□□ 0.72
SRGAP3-209ENST00000490889 RPS6P62753 249 aaKnown RBP19.53■□□□□ 0.72
SRGAP3-209ENST00000490889 RNF207Q6ZRF8 634 aa19.53■□□□□ 0.72
SRGAP3-209ENST00000490889 PLEKHM2Q8IWE5 1019 aa19.53■□□□□ 0.72
SRGAP3-209ENST00000490889 HERVK_113Q902F9 699 aa19.53■□□□□ 0.72
SRGAP3-209ENST00000490889 TTC14Q96N46 770 aa19.53■□□□□ 0.72
SRGAP3-209ENST00000490889 GBF1Q92538 1859 aa19.53■□□□□ 0.72
SRGAP3-209ENST00000490889 WDR19Q8NEZ3 1342 aa19.52■□□□□ 0.72
SRGAP3-209ENST00000490889 LOC102724159A0A0B4J2E5 919 aa19.52■□□□□ 0.72
SRGAP3-209ENST00000490889 IGHDP01880 384 aa19.52■□□□□ 0.72
SRGAP3-209ENST00000490889 PCP11498 1178 aaKnown RBP19.52■□□□□ 0.72
SRGAP3-209ENST00000490889 EDNRBP24530 442 aa19.52■□□□□ 0.72
SRGAP3-209ENST00000490889 PWP2Q15269 919 aaKnown RBP19.52■□□□□ 0.72
SRGAP3-209ENST00000490889 ALDH8A1Q9H2A2 487 aaPredicted RBP19.52■□□□□ 0.72
SRGAP3-209ENST00000490889 PURAQ00577 322 aaKnown RBP19.51■□□□□ 0.71
SRGAP3-209ENST00000490889 OTOP2Q7RTS6 562 aa19.51■□□□□ 0.71
SRGAP3-209ENST00000490889 CHD1LQ86WJ1 897 aa19.51■□□□□ 0.71
SRGAP3-209ENST00000490889 PPP1R13LQ8WUF5 828 aa19.51■□□□□ 0.71
SRGAP3-209ENST00000490889 ESR2Q92731 530 aa19.51■□□□□ 0.71
SRGAP3-209ENST00000490889 COPS5Q92905 334 aa19.51■□□□□ 0.71
SRGAP3-209ENST00000490889 SCLYQ96I15 445 aa19.51■□□□□ 0.71
SRGAP3-209ENST00000490889 SEZ6LQ9BYH1 1024 aa19.51■□□□□ 0.71
SRGAP3-209ENST00000490889 UBA5Q9GZZ9 404 aa19.51■□□□□ 0.71
SRGAP3-209ENST00000490889 OSBPL3Q9H4L5 887 aa19.51■□□□□ 0.71
SRGAP3-209ENST00000490889 TRMT13Q9NUP7 481 aaKnown RBP19.51■□□□□ 0.71
SRGAP3-209ENST00000490889 TTC28Q96AY4 2481 aa19.5■□□□□ 0.71
SRGAP3-209ENST00000490889 FGBP02675 491 aa19.5■□□□□ 0.71
SRGAP3-209ENST00000490889 CYP2C9P11712 490 aa19.5■□□□□ 0.71
SRGAP3-209ENST00000490889 CWC27Q6UX04 472 aaKnown RBP19.5■□□□□ 0.71
SRGAP3-209ENST00000490889 OR6J1Q8NGC5 347 aa19.5■□□□□ 0.71
SRGAP3-209ENST00000490889 RNF41Q9H4P4 317 aaPredicted RBP19.5■□□□□ 0.71
SRGAP3-209ENST00000490889 PRDM12Q9H4Q4 367 aa19.5■□□□□ 0.71
SRGAP3-209ENST00000490889 POLR3EQ9NVU0 708 aa19.5■□□□□ 0.71
SRGAP3-209ENST00000490889 YBX2Q9Y2T7 364 aaKnown RBP19.5■□□□□ 0.71
SRGAP3-209ENST00000490889 ZNF213O14771 459 aa19.49■□□□□ 0.71
SRGAP3-209ENST00000490889 KDM4AO75164 1064 aa19.49■□□□□ 0.71
SRGAP3-209ENST00000490889 ARIH2O95376 493 aa19.49■□□□□ 0.71
SRGAP3-209ENST00000490889 MYL3P08590 195 aa19.49■□□□□ 0.71
SRGAP3-209ENST00000490889 NUCB1Q02818 461 aa19.49■□□□□ 0.71
SRGAP3-209ENST00000490889 PDE4DQ08499 809 aa19.49■□□□□ 0.71
SRGAP3-209ENST00000490889 USH1GQ495M9 461 aa19.49■□□□□ 0.71
SRGAP3-209ENST00000490889 DGKHQ86XP1 1220 aa19.49■□□□□ 0.71
SRGAP3-209ENST00000490889 TBC1D5Q92609 795 aa19.49■□□□□ 0.71
SRGAP3-209ENST00000490889 RWDD1Q9H446 243 aaPredicted RBP19.49■□□□□ 0.71
SRGAP3-209ENST00000490889 PRDM6Q9NQX0 595 aa19.49■□□□□ 0.71
SRGAP3-209ENST00000490889 SCN10AQ9Y5Y9 1956 aa19.49■□□□□ 0.71
SRGAP3-209ENST00000490889 TNKSO95271 1327 aa19.49■□□□□ 0.71
SRGAP3-209ENST00000490889 MUC3AQ02505 3323 aa19.48■□□□□ 0.71
SRGAP3-209ENST00000490889 CPT1AP50416 773 aa19.48■□□□□ 0.71
SRGAP3-209ENST00000490889 MFAP1P55081 439 aaKnown RBP19.48■□□□□ 0.71
SRGAP3-209ENST00000490889 GPATCH4Q5T3I0 446 aaKnown RBP19.48■□□□□ 0.71
SRGAP3-209ENST00000490889 PNMA1Q8ND90 353 aa19.48■□□□□ 0.71
SRGAP3-209ENST00000490889 DNERQ8NFT8 737 aa19.48■□□□□ 0.71
SRGAP3-209ENST00000490889 NKX2-4Q9H2Z4 354 aa19.48■□□□□ 0.71
SRGAP3-209ENST00000490889 PNMA2Q9UL42 364 aa19.48■□□□□ 0.71
SRGAP3-209ENST00000490889 SCN5AQ14524 2016 aa19.47■□□□□ 0.71
SRGAP3-209ENST00000490889 B4E1Z4 1266 aa19.47■□□□□ 0.71
SRGAP3-209ENST00000490889 AAMPQ13685 434 aa19.47■□□□□ 0.71
SRGAP3-209ENST00000490889 ADGRE1Q14246 886 aa19.47■□□□□ 0.71
SRGAP3-209ENST00000490889 PPP2R5BQ15173 497 aa19.47■□□□□ 0.71
SRGAP3-209ENST00000490889 CDC37Q16543 378 aaPredicted RBP19.47■□□□□ 0.71
SRGAP3-209ENST00000490889 NBPF20Q3BBV1 942 aa19.47■□□□□ 0.71
SRGAP3-209ENST00000490889 EXOC6Q8TAG9 804 aa19.47■□□□□ 0.71
SRGAP3-209ENST00000490889 SCFD2Q8WU76 684 aa19.47■□□□□ 0.71
SRGAP3-209ENST00000490889 MTG1Q9BT17 334 aaPredicted RBP19.47■□□□□ 0.71
SRGAP3-209ENST00000490889 IL25Q9H293 177 aa19.47■□□□□ 0.71
SRGAP3-209ENST00000490889 COL20A1Q9P218 1284 aa19.47■□□□□ 0.71
SRGAP3-209ENST00000490889 REV3LO60673 3130 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms