RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 GNEQ9Y223 722 aaKnown RBP17.7■□□□□ 0.42
COL27A1-206ENST00000490831 DDX49Q9Y6V7 483 aaKnown RBP17.7■□□□□ 0.42
COL27A1-206ENST00000490831 MYH6P13533 1939 aa17.7■□□□□ 0.42
COL27A1-206ENST00000490831 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.69■□□□□ 0.42
COL27A1-206ENST00000490831 RBM47A0AV96 593 aaKnown RBP17.69■□□□□ 0.42
COL27A1-206ENST00000490831 MOXD2PA6NHM9 499 aa17.69■□□□□ 0.42
COL27A1-206ENST00000490831 CTAGE5O15320 804 aa17.69■□□□□ 0.42
COL27A1-206ENST00000490831 CYTH3O43739 400 aa17.69■□□□□ 0.42
COL27A1-206ENST00000490831 PPP1R11O60927 126 aaPredicted RBP17.69■□□□□ 0.42
COL27A1-206ENST00000490831 ATN1P54259 1190 aaPredicted RBP17.69■□□□□ 0.42
COL27A1-206ENST00000490831 RTP1P59025 263 aa17.69■□□□□ 0.42
COL27A1-206ENST00000490831 TNFAIP2Q03169 654 aa17.69■□□□□ 0.42
COL27A1-206ENST00000490831 MCF2L2Q86YR7 1114 aa17.69■□□□□ 0.42
COL27A1-206ENST00000490831 ZNF654Q8IZM8 581 aa17.69■□□□□ 0.42
COL27A1-206ENST00000490831 KCNB2Q92953 911 aa17.69■□□□□ 0.42
COL27A1-206ENST00000490831 GDF15Q99988 308 aa17.69■□□□□ 0.42
COL27A1-206ENST00000490831 ZMYND8Q9ULU4 1186 aaPredicted RBP17.69■□□□□ 0.42
COL27A1-206ENST00000490831 Q9Y3F1 56 aa17.69■□□□□ 0.42
COL27A1-206ENST00000490831 A0A1W2PQ45 241 aaPredicted RBP17.68■□□□□ 0.42
COL27A1-206ENST00000490831 A0A1W2PQY0 241 aa17.68■□□□□ 0.42
COL27A1-206ENST00000490831 MYADML2A6NDP7 307 aa17.68■□□□□ 0.42
COL27A1-206ENST00000490831 OPLAHO14841 1288 aa17.68■□□□□ 0.42
COL27A1-206ENST00000490831 MYCNP04198 464 aaPredicted RBP17.68■□□□□ 0.42
COL27A1-206ENST00000490831 SMARCA1P28370 1054 aa17.68■□□□□ 0.42
COL27A1-206ENST00000490831 BMP8BP34820 402 aa17.68■□□□□ 0.42
COL27A1-206ENST00000490831 ACLYP53396 1101 aa17.68■□□□□ 0.42
COL27A1-206ENST00000490831 SGMS1Q86VZ5 419 aa17.68■□□□□ 0.42
COL27A1-206ENST00000490831 FBXO16Q8IX29 292 aaPredicted RBP17.68■□□□□ 0.42
COL27A1-206ENST00000490831 RASEFQ8IZ41 740 aa17.68■□□□□ 0.42
COL27A1-206ENST00000490831 SAMD3Q8N6K7 520 aa17.68■□□□□ 0.42
COL27A1-206ENST00000490831 SYTL5Q8TDW5 730 aaPredicted RBP17.68■□□□□ 0.42
COL27A1-206ENST00000490831 TBC1D5Q92609 795 aa17.68■□□□□ 0.42
COL27A1-206ENST00000490831 FERMT2Q96AC1 680 aa17.68■□□□□ 0.42
COL27A1-206ENST00000490831 SPC25Q9HBM1 224 aa17.68■□□□□ 0.42
COL27A1-206ENST00000490831 PDGFCQ9NRA1 345 aa17.68■□□□□ 0.42
COL27A1-206ENST00000490831 RBM27Q9P2N5 1060 aaKnown RBP17.68■□□□□ 0.42
COL27A1-206ENST00000490831 TRIOBPQ9H2D6 2365 aa17.68■□□□□ 0.42
COL27A1-206ENST00000490831 A0A1W2PPC1 479 aa17.67■□□□□ 0.42
COL27A1-206ENST00000490831 CENPBP07199 599 aaPredicted RBP17.67■□□□□ 0.42
COL27A1-206ENST00000490831 C6orf222P0C671 652 aaPredicted RBP17.67■□□□□ 0.42
COL27A1-206ENST00000490831 SMPD1P17405 629 aa17.67■□□□□ 0.42
COL27A1-206ENST00000490831 HSD17B4P51659 736 aa17.67■□□□□ 0.42
COL27A1-206ENST00000490831 EXOSC10Q01780 885 aaKnown RBP17.67■□□□□ 0.42
COL27A1-206ENST00000490831 TRAF1Q13077 416 aa17.67■□□□□ 0.42
COL27A1-206ENST00000490831 KCNA10Q16322 511 aa17.67■□□□□ 0.42
COL27A1-206ENST00000490831 PCSK9Q8NBP7 692 aaKnown RBP17.67■□□□□ 0.42
COL27A1-206ENST00000490831 NEK1Q96PY6 1258 aa17.67■□□□□ 0.42
COL27A1-206ENST00000490831 PIGSQ96S52 555 aa17.67■□□□□ 0.42
COL27A1-206ENST00000490831 MPHOSPH6Q99547 160 aaKnown RBP17.67■□□□□ 0.42
COL27A1-206ENST00000490831 SPZ1Q9BXG8 430 aa17.67■□□□□ 0.42
COL27A1-206ENST00000490831 MAP3K20Q9NYL2 800 aaKnown RBP17.67■□□□□ 0.42
COL27A1-206ENST00000490831 COL20A1Q9P218 1284 aa17.67■□□□□ 0.42
COL27A1-206ENST00000490831 BAZ2BQ9UIF8 2168 aaKnown RBP17.66■□□□□ 0.42
COL27A1-206ENST00000490831 PNMA6FA0A0J9YX94 578 aa17.66■□□□□ 0.42
COL27A1-206ENST00000490831 B4DLN1 442 aa17.66■□□□□ 0.42
COL27A1-206ENST00000490831 SYN1P17600 705 aa17.66■□□□□ 0.42
COL27A1-206ENST00000490831 KIF5BP33176 963 aa17.66■□□□□ 0.42
COL27A1-206ENST00000490831 MRPL12P52815 198 aaKnown RBP17.66■□□□□ 0.42
COL27A1-206ENST00000490831 IRX5P78411 483 aaPredicted RBP17.66■□□□□ 0.42
COL27A1-206ENST00000490831 KRT32Q14532 448 aa17.66■□□□□ 0.42
COL27A1-206ENST00000490831 DUSP28Q4G0W2 176 aa17.66■□□□□ 0.42
COL27A1-206ENST00000490831 EEPD1Q7L9B9 569 aa17.66■□□□□ 0.42
COL27A1-206ENST00000490831 TLK2Q86UE8 772 aa17.66■□□□□ 0.42
COL27A1-206ENST00000490831 CTCFLQ8NI51 663 aaPredicted RBP17.66■□□□□ 0.42
COL27A1-206ENST00000490831 NUP133Q8WUM0 1156 aa17.66■□□□□ 0.42
COL27A1-206ENST00000490831 LZTS2Q9BRK4 669 aa17.66■□□□□ 0.42
COL27A1-206ENST00000490831 PCDHA1Q9Y5I3 950 aa17.66■□□□□ 0.42
COL27A1-206ENST00000490831 ELP1O95163 1332 aa17.66■□□□□ 0.42
COL27A1-206ENST00000490831 CCDC69A6NI79 296 aa17.65■□□□□ 0.42
COL27A1-206ENST00000490831 EPB41L2O43491 1005 aaKnown RBP17.65■□□□□ 0.42
COL27A1-206ENST00000490831 CALM1P0DP23 149 aa17.65■□□□□ 0.42
COL27A1-206ENST00000490831 CALM2P0DP24 149 aa17.65■□□□□ 0.42
COL27A1-206ENST00000490831 CALM3P0DP25 149 aa17.65■□□□□ 0.42
COL27A1-206ENST00000490831 MAGEA10P43363 369 aaPredicted RBP17.65■□□□□ 0.42
COL27A1-206ENST00000490831 GNAQP50148 359 aa17.65■□□□□ 0.42
COL27A1-206ENST00000490831 PDE4DQ08499 809 aa17.65■□□□□ 0.42
COL27A1-206ENST00000490831 ADCK5Q3MIX3 580 aa17.65■□□□□ 0.42
COL27A1-206ENST00000490831 TRIM60Q495X7 471 aa17.65■□□□□ 0.42
COL27A1-206ENST00000490831 GNASQ5JWF2 1037 aa17.65■□□□□ 0.42
COL27A1-206ENST00000490831 DHX32Q7L7V1 743 aaKnown RBP17.65■□□□□ 0.42
COL27A1-206ENST00000490831 NSUN6Q8TEA1 469 aaKnown RBP17.65■□□□□ 0.42
COL27A1-206ENST00000490831 TAAR1Q96RJ0 339 aa17.65■□□□□ 0.42
COL27A1-206ENST00000490831 IWS1Q96ST2 819 aa17.65■□□□□ 0.42
COL27A1-206ENST00000490831 MYL10Q9BUA6 226 aa17.65■□□□□ 0.42
COL27A1-206ENST00000490831 ATP11BQ9Y2G3 1177 aa17.65■□□□□ 0.42
COL27A1-206ENST00000490831 ASGR1P07306 291 aa17.64■□□□□ 0.41
COL27A1-206ENST00000490831 HSPA4P34932 840 aa17.64■□□□□ 0.41
COL27A1-206ENST00000490831 TMEM63BQ5T3F8 832 aa17.64■□□□□ 0.41
COL27A1-206ENST00000490831 NFXL1Q6ZNB6 911 aa17.64■□□□□ 0.41
COL27A1-206ENST00000490831 HOMER1Q86YM7 354 aa17.64■□□□□ 0.41
COL27A1-206ENST00000490831 LRRC2Q9BYS8 371 aa17.64■□□□□ 0.41
COL27A1-206ENST00000490831 WDR11Q9BZH6 1224 aa17.64■□□□□ 0.41
COL27A1-206ENST00000490831 STARD7Q9NQZ5 370 aa17.64■□□□□ 0.41
COL27A1-206ENST00000490831 NKRFO15226 690 aaKnown RBP eCLIP17.63■□□□□ 0.41
COL27A1-206ENST00000490831 DYNC1LI2O43237 492 aaPredicted RBP17.63■□□□□ 0.41
COL27A1-206ENST00000490831 REC8O95072 547 aa17.63■□□□□ 0.41
COL27A1-206ENST00000490831 SLC34A2O95436 690 aa17.63■□□□□ 0.41
COL27A1-206ENST00000490831 HMGB1P09429 215 aaKnown RBP17.63■□□□□ 0.41
COL27A1-206ENST00000490831 FXR1P51114 621 aaKnown RBP eCLIP17.63■□□□□ 0.41
COL27A1-206ENST00000490831 FSCN1Q16658 493 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms