RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 ANO10Q9NW15 660 aa11.67□□□□□ -0.54
HDAC3-210ENST00000490808 AGTPBP1Q9UPW5 1226 aa11.67□□□□□ -0.54
HDAC3-210ENST00000490808 TMX2Q9Y320 296 aa11.67□□□□□ -0.54
HDAC3-210ENST00000490808 FRMPD2Q68DX3 1309 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-210ENST00000490808 CYTH3O43739 400 aa11.66□□□□□ -0.54
HDAC3-210ENST00000490808 PFKFB1P16118 471 aa11.66□□□□□ -0.54
HDAC3-210ENST00000490808 TOB1P50616 345 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-210ENST00000490808 ADCY7P51828 1080 aa11.66□□□□□ -0.54
HDAC3-210ENST00000490808 TYRO3Q06418 890 aa11.66□□□□□ -0.54
HDAC3-210ENST00000490808 IKQ13123 557 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-210ENST00000490808 SNW1Q13573 536 aaKnown RBP11.66□□□□□ -0.54
HDAC3-210ENST00000490808 RRP1BQ14684 758 aaKnown RBP11.66□□□□□ -0.54
HDAC3-210ENST00000490808 ADGRF4Q8IZF3 695 aa11.66□□□□□ -0.54
HDAC3-210ENST00000490808 CHURC1Q8WUH1 139 aa11.66□□□□□ -0.54
HDAC3-210ENST00000490808 BRI3BPQ8WY22 251 aa11.66□□□□□ -0.54
HDAC3-210ENST00000490808 GPKOWQ92917 476 aaPredicted RBP eCLIP11.66□□□□□ -0.54
HDAC3-210ENST00000490808 TNFRSF25Q93038 417 aa11.66□□□□□ -0.54
HDAC3-210ENST00000490808 PIGSQ96S52 555 aa11.66□□□□□ -0.54
HDAC3-210ENST00000490808 UBA5Q9GZZ9 404 aa11.66□□□□□ -0.54
HDAC3-210ENST00000490808 PCDHB6Q9Y5E3 794 aa11.66□□□□□ -0.54
HDAC3-210ENST00000490808 BAZ2BQ9UIF8 2168 aaKnown RBP11.65□□□□□ -0.54
HDAC3-210ENST00000490808 MYPNQ86TC9 1320 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 F5H6K3 240 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 BMP3P12645 472 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 OSBPP22059 807 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 LONP1P36776 959 aaKnown RBP11.65□□□□□ -0.54
HDAC3-210ENST00000490808 GCLCP48506 637 aaPredicted RBP11.65□□□□□ -0.54
HDAC3-210ENST00000490808 NDUFA8P51970 172 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 TPM4P67936 248 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 KLRC3Q07444 240 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 CKAP2LQ8IYA6 745 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 REXO1Q8N1G1 1221 aaKnown RBP11.65□□□□□ -0.54
HDAC3-210ENST00000490808 FAM200AQ8TCP9 573 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 CNKSR2Q8WXI2 1034 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 CUL5Q93034 780 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 FUCA2Q9BTY2 467 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 GOLPH3LQ9H4A5 285 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 VCPKMTQ9H867 229 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 KCNH3Q9ULD8 1083 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 PCDHA6Q9UN73 950 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 HPSEQ9Y251 543 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 PCDHA8Q9Y5H6 950 aa11.65□□□□□ -0.54
HDAC3-210ENST00000490808 USP17L15C9J2P7 530 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 BTBD19C9JJ37 291 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 USP17L13C9JLJ4 530 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 USP17L11C9JVI0 530 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 USP17L18D6R9N7 530 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 USP17L22D6RA61 530 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 USP17L17D6RBQ6 530 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 USP17L19D6RCP7 530 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 USP17L20D6RJB6 530 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 GOLGA6L19H0YKK7 550 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 WDR46O15213 610 aaKnown RBP11.64□□□□□ -0.55
HDAC3-210ENST00000490808 FDX1P10109 184 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 PRPHP41219 470 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 HMGCS2P54868 508 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 ATP2C1P98194 919 aaPredicted RBP11.64□□□□□ -0.55
HDAC3-210ENST00000490808 USP17L24Q0WX57 530 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 MTMR2Q13614 643 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 MOGSQ13724 837 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 TAF1CQ15572 869 aaPredicted RBP11.64□□□□□ -0.55
HDAC3-210ENST00000490808 ZNF174Q15697 407 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 NPY5RQ15761 445 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 HABP4Q5JVS0 413 aaKnown RBP11.64□□□□□ -0.55
HDAC3-210ENST00000490808 NEK8Q86SG6 692 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 FAM160B2Q86V87 743 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 CEP57L1Q8IYX8 460 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 CNNM3Q8NE01 707 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 MTMR8Q96EF0 704 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 AMNQ9BXJ7 453 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 JMJD4Q9H9V9 463 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 RIC8AQ9NPQ8 531 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 KIAA1468Q9P260 1216 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 FBXO2Q9UK22 296 aaPredicted RBP11.64□□□□□ -0.55
HDAC3-210ENST00000490808 PNMA2Q9UL42 364 aa11.64□□□□□ -0.55
HDAC3-210ENST00000490808 M0R2N6 131 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 PDHXO00330 501 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 IGF2BP3O00425 579 aaKnown RBP eCLIP11.63□□□□□ -0.55
HDAC3-210ENST00000490808 TLR2O60603 784 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 PLA2G6O60733 806 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 SMC2O95347 1197 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 GNRH1P01148 92 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 MCM7P33993 719 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 IRX3P78415 501 aaPredicted RBP11.63□□□□□ -0.55
HDAC3-210ENST00000490808 MKRN3Q13064 507 aaKnown RBP11.63□□□□□ -0.55
HDAC3-210ENST00000490808 PTGDRQ13258 359 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 PKN2Q16513 984 aaKnown RBP11.63□□□□□ -0.55
HDAC3-210ENST00000490808 SHC4Q6S5L8 630 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 BTNL9Q6UXG8 535 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 LBX2Q6XYB7 198 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 DTHD1Q6ZMT9 781 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 KRBA2Q6ZNG9 492 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 GADL1Q6ZQY3 521 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 KCTD1Q719H9 257 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 MB21D1Q8N884 522 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 PTPN18Q99952 460 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 RAB34Q9BZG1 259 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 HOXC10Q9NYD6 342 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 DACH1Q9UI36 760 aa11.63□□□□□ -0.55
HDAC3-210ENST00000490808 SMTNL1A8MU46 457 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms