RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.11■■□□□ 1.29
SREBF1-216ENST00000490796 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.11■■□□□ 1.29
SREBF1-216ENST00000490796 B4DLN1 442 aa23.11■■□□□ 1.29
SREBF1-216ENST00000490796 KDM4AO75164 1064 aa23.11■■□□□ 1.29
SREBF1-216ENST00000490796 MRPL12P52815 198 aaKnown RBP23.11■■□□□ 1.29
SREBF1-216ENST00000490796 PDE4DQ08499 809 aa23.11■■□□□ 1.29
SREBF1-216ENST00000490796 ITGA7Q13683 1181 aa23.11■■□□□ 1.29
SREBF1-216ENST00000490796 IMMTQ16891 758 aaKnown RBP23.11■■□□□ 1.29
SREBF1-216ENST00000490796 MORC4Q8TE76 937 aa23.11■■□□□ 1.29
SREBF1-216ENST00000490796 WDR11Q9BZH6 1224 aa23.11■■□□□ 1.29
SREBF1-216ENST00000490796 WDR19Q8NEZ3 1342 aa23.1■■□□□ 1.29
SREBF1-216ENST00000490796 GOLGA8HP0CJ92 632 aa23.1■■□□□ 1.29
SREBF1-216ENST00000490796 SNHG28P0DPA3 235 aa23.1■■□□□ 1.29
SREBF1-216ENST00000490796 USH1GQ495M9 461 aa23.1■■□□□ 1.29
SREBF1-216ENST00000490796 DUSP28Q4G0W2 176 aa23.1■■□□□ 1.29
SREBF1-216ENST00000490796 SLC30A10Q6XR72 485 aa23.1■■□□□ 1.29
SREBF1-216ENST00000490796 PNMA1Q8ND90 353 aa23.1■■□□□ 1.29
SREBF1-216ENST00000490796 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.1■■□□□ 1.291e-9■■■□□ 15
SREBF1-216ENST00000490796 A0A0C4DFX4 3053 aa23.1■■□□□ 1.29
SREBF1-216ENST00000490796 TMEM265A0A087WTH1 108 aa23.09■■□□□ 1.29
SREBF1-216ENST00000490796 CSF2RAP15509 400 aa23.09■■□□□ 1.29
SREBF1-216ENST00000490796 BRDTQ58F21 947 aaPredicted RBP23.09■■□□□ 1.29
SREBF1-216ENST00000490796 PSRC1Q6PGN9 363 aaPredicted RBP23.09■■□□□ 1.29
SREBF1-216ENST00000490796 CLEC4DQ8WXI8 215 aa23.09■■□□□ 1.29
SREBF1-216ENST00000490796 DSCC1Q9BVC3 393 aa23.09■■□□□ 1.29
SREBF1-216ENST00000490796 GPHNQ9NQX3 736 aaPredicted RBP23.09■■□□□ 1.29
SREBF1-216ENST00000490796 B4E1Z4 1266 aa23.08■■□□□ 1.29
SREBF1-216ENST00000490796 DHX16O60231 1041 aaKnown RBP23.08■■□□□ 1.29
SREBF1-216ENST00000490796 PTGS1P23219 599 aa23.08■■□□□ 1.29
SREBF1-216ENST00000490796 CPT1AP50416 773 aa23.08■■□□□ 1.29
SREBF1-216ENST00000490796 RPS6P62753 249 aaKnown RBP23.08■■□□□ 1.29
SREBF1-216ENST00000490796 ZSCAN10Q96SZ4 725 aaPredicted RBP23.08■■□□□ 1.29
SREBF1-216ENST00000490796 KRT23Q9C075 422 aa23.08■■□□□ 1.29
SREBF1-216ENST00000490796 UBA5Q9GZZ9 404 aa23.08■■□□□ 1.29
SREBF1-216ENST00000490796 HIPK3Q9H422 1215 aa23.08■■□□□ 1.29
SREBF1-216ENST00000490796 POLR3EQ9NVU0 708 aa23.08■■□□□ 1.29
SREBF1-216ENST00000490796 RAD50Q92878 1312 aa23.08■■□□□ 1.28
SREBF1-216ENST00000490796 CD4P01730 458 aa23.07■■□□□ 1.28
SREBF1-216ENST00000490796 CYP2C18P33260 490 aa23.07■■□□□ 1.28
SREBF1-216ENST00000490796 PPP2R5BQ15173 497 aa23.07■■□□□ 1.28
SREBF1-216ENST00000490796 SLC43A3Q8NBI5 491 aa23.07■■□□□ 1.28
SREBF1-216ENST00000490796 DNERQ8NFT8 737 aa23.07■■□□□ 1.28
SREBF1-216ENST00000490796 OR6J1Q8NGC5 347 aa23.07■■□□□ 1.28
SREBF1-216ENST00000490796 MYLIPQ8WY64 445 aa23.07■■□□□ 1.28
SREBF1-216ENST00000490796 UBAC1Q9BSL1 405 aa23.07■■□□□ 1.28
SREBF1-216ENST00000490796 MTIF3Q9H2K0 278 aaKnown RBP23.07■■□□□ 1.28
SREBF1-216ENST00000490796 TTYH1Q9H313 450 aaPredicted RBP23.07■■□□□ 1.28
SREBF1-216ENST00000490796 CNNM2Q9H8M5 875 aa23.07■■□□□ 1.28
SREBF1-216ENST00000490796 MYL3P08590 195 aa23.06■■□□□ 1.28
SREBF1-216ENST00000490796 ACRP10323 421 aa23.06■■□□□ 1.28
SREBF1-216ENST00000490796 FOSL2P15408 326 aa23.06■■□□□ 1.28
SREBF1-216ENST00000490796 DNAJB2P25686 324 aa23.06■■□□□ 1.28
SREBF1-216ENST00000490796 PSMC6P62333 389 aa23.06■■□□□ 1.28
SREBF1-216ENST00000490796 CDC37Q16543 378 aaPredicted RBP23.06■■□□□ 1.28
SREBF1-216ENST00000490796 ASPRV1Q53RT3 343 aa23.06■■□□□ 1.28
SREBF1-216ENST00000490796 TMEM240Q5SV17 173 aa23.06■■□□□ 1.28
SREBF1-216ENST00000490796 TMEM63BQ5T3F8 832 aa23.06■■□□□ 1.28
SREBF1-216ENST00000490796 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.06■■□□□ 1.28
SREBF1-216ENST00000490796 MAFAQ8NHW3 353 aaPredicted RBP23.06■■□□□ 1.28
SREBF1-216ENST00000490796 NKRFO15226 690 aaKnown RBP eCLIP23.05■■□□□ 1.28
SREBF1-216ENST00000490796 ZNF365Q70YC5 407 aa23.05■■□□□ 1.28
SREBF1-216ENST00000490796 SCFD2Q8WU76 684 aa23.05■■□□□ 1.28
SREBF1-216ENST00000490796 TRPV6Q9H1D0 765 aa23.05■■□□□ 1.28
SREBF1-216ENST00000490796 CPVLQ9H3G5 476 aa23.05■■□□□ 1.28
SREBF1-216ENST00000490796 IL23AQ9NPF7 189 aa23.05■■□□□ 1.28
SREBF1-216ENST00000490796 LRRC37A2A6NM11 1700 aa23.05■■□□□ 1.28
SREBF1-216ENST00000490796 RBM47A0AV96 593 aaKnown RBP23.04■■□□□ 1.28
SREBF1-216ENST00000490796 PARP1P09874 1014 aaKnown RBP23.04■■□□□ 1.28
SREBF1-216ENST00000490796 SUPT20HL2P0C7V6 817 aa23.04■■□□□ 1.28
SREBF1-216ENST00000490796 MCF2L2Q86YR7 1114 aa23.04■■□□□ 1.28
SREBF1-216ENST00000490796 RGS22Q8NE09 1264 aa23.04■■□□□ 1.28
SREBF1-216ENST00000490796 ANKS1AQ92625 1134 aa23.04■■□□□ 1.28
SREBF1-216ENST00000490796 TIFAQ96CG3 184 aa23.04■■□□□ 1.28
SREBF1-216ENST00000490796 ZSWIM5Q9P217 1185 aa23.04■■□□□ 1.28
SREBF1-216ENST00000490796 TNKSO95271 1327 aa23.04■■□□□ 1.28
SREBF1-216ENST00000490796 ABCB11O95342 1321 aa23.04■■□□□ 1.28
SREBF1-216ENST00000490796 FGBP02675 491 aa23.03■■□□□ 1.28
SREBF1-216ENST00000490796 CCL23P55773 120 aa23.03■■□□□ 1.28
SREBF1-216ENST00000490796 FAM47CQ5HY64 1035 aa23.03■■□□□ 1.28
SREBF1-216ENST00000490796 IFIT1BQ5T764 474 aaKnown RBP23.03■■□□□ 1.28
SREBF1-216ENST00000490796 C16orf59Q7L2K0 433 aa23.03■■□□□ 1.28
SREBF1-216ENST00000490796 ADGRF4Q8IZF3 695 aa23.03■■□□□ 1.28
SREBF1-216ENST00000490796 ENAHQ8N8S7 591 aaPredicted RBP23.03■■□□□ 1.28
SREBF1-216ENST00000490796 MTG1Q9BT17 334 aaPredicted RBP23.03■■□□□ 1.28
SREBF1-216ENST00000490796 VAT1LQ9HCJ6 419 aa23.03■■□□□ 1.28
SREBF1-216ENST00000490796 GRIN2DO15399 1336 aa23.03■■□□□ 1.28
SREBF1-216ENST00000490796 LCTP09848 1927 aa23.02■■□□□ 1.28
SREBF1-216ENST00000490796 B4GALT4O60513 344 aa23.02■■□□□ 1.28
SREBF1-216ENST00000490796 TXNP10599 105 aaKnown RBP23.02■■□□□ 1.28
SREBF1-216ENST00000490796 TRDNQ13061 729 aa23.02■■□□□ 1.28
SREBF1-216ENST00000490796 TTLL4Q14679 1199 aa23.02■■□□□ 1.28
SREBF1-216ENST00000490796 RPUSD2Q8IZ73 545 aaKnown RBP23.02■■□□□ 1.28
SREBF1-216ENST00000490796 MAF1Q9H063 256 aa23.02■■□□□ 1.28
SREBF1-216ENST00000490796 ALDH8A1Q9H2A2 487 aaPredicted RBP23.02■■□□□ 1.28
SREBF1-216ENST00000490796 MRPL11Q9Y3B7 192 aaKnown RBP23.02■■□□□ 1.28
SREBF1-216ENST00000490796 SUPT16HQ9Y5B9 1047 aaKnown RBP23.02■■□□□ 1.28
SREBF1-216ENST00000490796 KPNA6O60684 536 aa23.01■■□□□ 1.27
SREBF1-216ENST00000490796 EDNRBP24530 442 aa23.01■■□□□ 1.27
SREBF1-216ENST00000490796 PURAQ00577 322 aaKnown RBP23.01■■□□□ 1.27
SREBF1-216ENST00000490796 FBXO11Q86XK2 927 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms