RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 MORC4Q8TE76 937 aa12.09□□□□□ -0.47
RBM39-236ENST00000490484 VTI1AQ96AJ9 217 aa12.09□□□□□ -0.47
RBM39-236ENST00000490484 VAT1LQ9HCJ6 419 aa12.09□□□□□ -0.47
RBM39-236ENST00000490484 RBM8AQ9Y5S9 174 aaKnown RBP12.09□□□□□ -0.47
RBM39-236ENST00000490484 ABCB11O95342 1321 aa12.09□□□□□ -0.47
RBM39-236ENST00000490484 MYH6P13533 1939 aa12.08□□□□□ -0.48
RBM39-236ENST00000490484 A0A0U1RQG5 324 aaPredicted RBP12.08□□□□□ -0.48
RBM39-236ENST00000490484 E7EWF7 191 aa12.08□□□□□ -0.48
RBM39-236ENST00000490484 PDE4DQ08499 809 aa12.08□□□□□ -0.48
RBM39-236ENST00000490484 CXCL17Q6UXB2 119 aa12.08□□□□□ -0.48
RBM39-236ENST00000490484 KIAA1211Q6ZU35 1233 aa12.08□□□□□ -0.48
RBM39-236ENST00000490484 CHST3Q7LGC8 479 aa12.08□□□□□ -0.48
RBM39-236ENST00000490484 STAG2Q8N3U4 1231 aa12.08□□□□□ -0.48
RBM39-236ENST00000490484 NCOA7Q8NI08 942 aa12.08□□□□□ -0.48
RBM39-236ENST00000490484 AP5M1Q9H0R1 490 aa12.08□□□□□ -0.48
RBM39-236ENST00000490484 JMJD4Q9H9V9 463 aa12.08□□□□□ -0.48
RBM39-236ENST00000490484 SENP2Q9HC62 589 aa12.08□□□□□ -0.48
RBM39-236ENST00000490484 TMEM39AQ9NV64 488 aa12.08□□□□□ -0.48
RBM39-236ENST00000490484 COL6A3P12111 3177 aa12.08□□□□□ -0.48
RBM39-236ENST00000490484 ELP1O95163 1332 aa12.08□□□□□ -0.48
RBM39-236ENST00000490484 MROH7Q68CQ1 1323 aa12.08□□□□□ -0.48
RBM39-236ENST00000490484 LOC102724159A0A0B4J2E5 919 aa12.07□□□□□ -0.48
RBM39-236ENST00000490484 ERICH2A1L162 156 aa12.07□□□□□ -0.48
RBM39-236ENST00000490484 DCDC2CA8MYV0 355 aa12.07□□□□□ -0.48
RBM39-236ENST00000490484 IFIT3O14879 490 aaKnown RBP12.07□□□□□ -0.48
RBM39-236ENST00000490484 KIAA0355O15063 1070 aa12.07□□□□□ -0.48
RBM39-236ENST00000490484 DYNC1LI2O43237 492 aaPredicted RBP12.07□□□□□ -0.48
RBM39-236ENST00000490484 RAG1P15918 1043 aa12.07□□□□□ -0.48
RBM39-236ENST00000490484 NKX3-2P78367 333 aa12.07□□□□□ -0.48
RBM39-236ENST00000490484 FAAP100Q0VG06 881 aa12.07□□□□□ -0.48
RBM39-236ENST00000490484 SART3Q15020 963 aaKnown RBP12.07□□□□□ -0.48
RBM39-236ENST00000490484 PWP2Q15269 919 aaKnown RBP12.07□□□□□ -0.48
RBM39-236ENST00000490484 C9orf50Q5SZB4 431 aa12.07□□□□□ -0.48
RBM39-236ENST00000490484 IQSEC1Q6DN90 963 aa12.07□□□□□ -0.48
RBM39-236ENST00000490484 CENPQQ7L2Z9 268 aaPredicted RBP12.07□□□□□ -0.48
RBM39-236ENST00000490484 FBXO11Q86XK2 927 aa12.07□□□□□ -0.48
RBM39-236ENST00000490484 TOX2Q96NM4 488 aa12.07□□□□□ -0.48
RBM39-236ENST00000490484 MPHOSPH6Q99547 160 aaKnown RBP12.07□□□□□ -0.48
RBM39-236ENST00000490484 WDR11Q9BZH6 1224 aa12.07□□□□□ -0.48
RBM39-236ENST00000490484 KLRF2D3W0D1 207 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 ARVCFO00192 962 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 ZEB2O60315 1214 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 EDNRBP24530 442 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 GRM4Q14833 912 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 WTAPQ15007 396 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 PPP2R5BQ15173 497 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 SHHQ15465 462 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 DUSP28Q4G0W2 176 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 TMEM67Q5HYA8 995 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 Q7L0L9 218 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 HOMER1Q86YM7 354 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 FAM126BQ8IXS8 530 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 MB21D2Q8IYB1 491 aaPredicted RBP12.06□□□□□ -0.48
RBM39-236ENST00000490484 DNERQ8NFT8 737 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 SYTL5Q8TDW5 730 aaPredicted RBP12.06□□□□□ -0.48
RBM39-236ENST00000490484 MAP4K1Q92918 833 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 ESYT1Q9BSJ8 1104 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 COL20A1Q9P218 1284 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 MAD2L2Q9UI95 211 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 CDH23Q9H251 3354 aa12.06□□□□□ -0.48
RBM39-236ENST00000490484 PPP1R11O60927 126 aaPredicted RBP12.05□□□□□ -0.48
RBM39-236ENST00000490484 ANTXR2P58335 489 aa12.05□□□□□ -0.48
RBM39-236ENST00000490484 PSMC6P62333 389 aa12.05□□□□□ -0.48
RBM39-236ENST00000490484 FPGSQ05932 587 aa12.05□□□□□ -0.48
RBM39-236ENST00000490484 MCF2L2Q86YR7 1114 aa12.05□□□□□ -0.48
RBM39-236ENST00000490484 DEFB123Q8N688 67 aa12.05□□□□□ -0.48
RBM39-236ENST00000490484 RGS22Q8NE09 1264 aa12.05□□□□□ -0.48
RBM39-236ENST00000490484 OR6J1Q8NGC5 347 aa12.05□□□□□ -0.48
RBM39-236ENST00000490484 SCFD2Q8WU76 684 aa12.05□□□□□ -0.48
RBM39-236ENST00000490484 TBC1D5Q92609 795 aa12.05□□□□□ -0.48
RBM39-236ENST00000490484 AMNQ9BXJ7 453 aa12.05□□□□□ -0.48
RBM39-236ENST00000490484 LSG1Q9H089 658 aaKnown RBP12.05□□□□□ -0.48
RBM39-236ENST00000490484 ANO2Q9NQ90 1003 aa12.05□□□□□ -0.48
RBM39-236ENST00000490484 TBX21Q9UL17 535 aa12.05□□□□□ -0.48
RBM39-236ENST00000490484 MRPL11Q9Y3B7 192 aaKnown RBP12.05□□□□□ -0.48
RBM39-236ENST00000490484 Q9Y3F1 56 aa12.05□□□□□ -0.48
RBM39-236ENST00000490484 RBM47A0AV96 593 aaKnown RBP12.04□□□□□ -0.48
RBM39-236ENST00000490484 PALM3A6NDB9 673 aaPredicted RBP12.04□□□□□ -0.48
RBM39-236ENST00000490484 B4DLN1 442 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 ZBTB5O15062 677 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 TLR3O15455 904 aaKnown RBP12.04□□□□□ -0.48
RBM39-236ENST00000490484 CABYRO75952 493 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 ARIH2O95376 493 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 CFBP00751 764 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 CPT1AP50416 773 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 CDK7P50613 346 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 MRPL12P52815 198 aaKnown RBP12.04□□□□□ -0.48
RBM39-236ENST00000490484 EPHB4P54760 987 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 ITGA7Q13683 1181 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 SLC35G1Q2M3R5 365 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 BMP2KLQ5H9B9 411 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 GPR153Q6NV75 609 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 CATIPQ7Z7H3 387 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 NSUN6Q8TEA1 469 aaKnown RBP12.04□□□□□ -0.48
RBM39-236ENST00000490484 RNPC3Q96LT9 517 aaKnown RBP12.04□□□□□ -0.48
RBM39-236ENST00000490484 TAAR1Q96RJ0 339 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 RMDN3Q96TC7 470 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 MYL10Q9BUA6 226 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 PPP1R12CQ9BZL4 782 aa12.04□□□□□ -0.48
RBM39-236ENST00000490484 OPLAHO14841 1288 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms