RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 MFSD14CQ5VZR4 134 aa12.54□□□□□ -0.4
VPS13D-210ENST00000489961 OLFML2BQ68BL8 750 aa12.54□□□□□ -0.4
VPS13D-210ENST00000489961 SLC30A10Q6XR72 485 aa12.54□□□□□ -0.4
VPS13D-210ENST00000489961 ZNF467Q7Z7K2 595 aaPredicted RBP12.54□□□□□ -0.4
VPS13D-210ENST00000489961 TNS4Q8IZW8 715 aa12.54□□□□□ -0.4
VPS13D-210ENST00000489961 NECAB1Q8N987 351 aa12.54□□□□□ -0.4
VPS13D-210ENST00000489961 FAM133AQ8N9E0 248 aa12.54□□□□□ -0.4
VPS13D-210ENST00000489961 SH3TC2Q8TF17 1288 aa12.54□□□□□ -0.4
VPS13D-210ENST00000489961 TRIB2Q92519 343 aa12.54□□□□□ -0.4
VPS13D-210ENST00000489961 GPKOWQ92917 476 aaPredicted RBP eCLIP12.54□□□□□ -0.4
VPS13D-210ENST00000489961 ADD3Q9UEY8 706 aaKnown RBP12.54□□□□□ -0.4
VPS13D-210ENST00000489961 GCOM1H8Y6P7 765 aaPredicted RBP12.53□□□□□ -0.4
VPS13D-210ENST00000489961 DEXIO95424 95 aa12.53□□□□□ -0.4
VPS13D-210ENST00000489961 INHAP05111 366 aa12.53□□□□□ -0.4
VPS13D-210ENST00000489961 POLR2MP0CAP2 368 aa12.53□□□□□ -0.4
VPS13D-210ENST00000489961 NAPAP54920 295 aa12.53□□□□□ -0.4
VPS13D-210ENST00000489961 CNTN2Q02246 1040 aa12.53□□□□□ -0.4
VPS13D-210ENST00000489961 WWC2Q6AWC2 1192 aa12.53□□□□□ -0.4
VPS13D-210ENST00000489961 PPP1R18Q6NYC8 613 aa12.53□□□□□ -0.4
VPS13D-210ENST00000489961 MSL3Q8N5Y2 521 aaKnown RBP12.53□□□□□ -0.4
VPS13D-210ENST00000489961 CCDC12Q8WUD4 166 aaPredicted RBP12.53□□□□□ -0.4
VPS13D-210ENST00000489961 CUL5Q93034 780 aa12.53□□□□□ -0.4
VPS13D-210ENST00000489961 ARMC5Q96C12 935 aa12.53□□□□□ -0.4
VPS13D-210ENST00000489961 MPHOSPH6Q99547 160 aaKnown RBP12.53□□□□□ -0.4
VPS13D-210ENST00000489961 BARHL2Q9NY43 387 aa12.53□□□□□ -0.4
VPS13D-210ENST00000489961 LCTP09848 1927 aa12.52□□□□□ -0.4
VPS13D-210ENST00000489961 ASB14A6NK59 587 aa12.52□□□□□ -0.41
VPS13D-210ENST00000489961 B4DLN1 442 aa12.52□□□□□ -0.41
VPS13D-210ENST00000489961 STXBP3O00186 592 aa12.52□□□□□ -0.41
VPS13D-210ENST00000489961 OPLAHO14841 1288 aa12.52□□□□□ -0.41
VPS13D-210ENST00000489961 PPFIA3O75145 1194 aa12.52□□□□□ -0.41
VPS13D-210ENST00000489961 HSD17B4P51659 736 aa12.52□□□□□ -0.41
VPS13D-210ENST00000489961 MRPL12P52815 198 aaKnown RBP12.52□□□□□ -0.41
VPS13D-210ENST00000489961 GHRHRQ02643 423 aa12.52□□□□□ -0.41
VPS13D-210ENST00000489961 PKN1Q16512 942 aa12.52□□□□□ -0.41
VPS13D-210ENST00000489961 TBC1D5Q92609 795 aa12.52□□□□□ -0.41
VPS13D-210ENST00000489961 TINF2Q9BSI4 451 aa12.52□□□□□ -0.41
VPS13D-210ENST00000489961 GLT8D2Q9H1C3 349 aa12.52□□□□□ -0.41
VPS13D-210ENST00000489961 PSTPIP2Q9H939 334 aa12.52□□□□□ -0.41
VPS13D-210ENST00000489961 FLRT1Q9NZU1 646 aa12.52□□□□□ -0.41
VPS13D-210ENST00000489961 STK36Q9NRP7 1315 aa12.52□□□□□ -0.41
VPS13D-210ENST00000489961 LOC102724159A0A0B4J2E5 919 aa12.51□□□□□ -0.41
VPS13D-210ENST00000489961 SOWAHBA6NEL2 793 aa12.51□□□□□ -0.41
VPS13D-210ENST00000489961 CYP2C19P33261 490 aa12.51□□□□□ -0.41
VPS13D-210ENST00000489961 ALDH5A1P51649 535 aaPredicted RBP12.51□□□□□ -0.41
VPS13D-210ENST00000489961 PWP2Q15269 919 aaKnown RBP12.51□□□□□ -0.41
VPS13D-210ENST00000489961 MAMDC4Q6UXC1 1216 aa12.51□□□□□ -0.41
VPS13D-210ENST00000489961 TEX2Q8IWB9 1127 aa12.51□□□□□ -0.41
VPS13D-210ENST00000489961 CCDC83Q8IWF9 413 aa12.51□□□□□ -0.41
VPS13D-210ENST00000489961 CCDC148Q8NFR7 591 aa12.51□□□□□ -0.41
VPS13D-210ENST00000489961 DNERQ8NFT8 737 aa12.51□□□□□ -0.41
VPS13D-210ENST00000489961 SMARCC2Q8TAQ2 1214 aa12.51□□□□□ -0.41
VPS13D-210ENST00000489961 SYTL5Q8TDW5 730 aaPredicted RBP12.51□□□□□ -0.41
VPS13D-210ENST00000489961 WASF1Q92558 559 aa12.51□□□□□ -0.41
VPS13D-210ENST00000489961 ABHD8Q96I13 439 aa12.51□□□□□ -0.41
VPS13D-210ENST00000489961 ZNF333Q96JL9 665 aa12.51□□□□□ -0.41
VPS13D-210ENST00000489961 FGD4Q96M96 766 aa12.51□□□□□ -0.41
VPS13D-210ENST00000489961 LLPHQ9BRT6 129 aaKnown RBP12.51□□□□□ -0.41
VPS13D-210ENST00000489961 SH3GLB2Q9NR46 395 aa12.51□□□□□ -0.41
VPS13D-210ENST00000489961 ORC3Q9UBD5 711 aaPredicted RBP12.51□□□□□ -0.41
VPS13D-210ENST00000489961 SYNGAP1Q96PV0 1343 aa12.51□□□□□ -0.41
VPS13D-210ENST00000489961 SMCO2A6NFE2 343 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 PIK3CDO00329 1044 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 CD2BP2O95400 341 aaKnown RBP12.5□□□□□ -0.41
VPS13D-210ENST00000489961 CTDNEP1O95476 244 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 PRKAR2AP13861 404 aaKnown RBP12.5□□□□□ -0.41
VPS13D-210ENST00000489961 XBP1P17861 261 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 HOXA13P31271 388 aaPredicted RBP12.5□□□□□ -0.41
VPS13D-210ENST00000489961 ADCY7P51828 1080 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 CACNB2Q08289 660 aaPredicted RBP12.5□□□□□ -0.41
VPS13D-210ENST00000489961 TRIM32Q13049 653 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 ARHGEF16Q5VV41 709 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 TYW1BQ6NUM6 668 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 ARMCX2Q7L311 632 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 FCHSD1Q86WN1 690 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 FAM177A1Q8N128 213 aaPredicted RBP12.5□□□□□ -0.41
VPS13D-210ENST00000489961 NSUN7Q8NE18 718 aaKnown RBP12.5□□□□□ -0.41
VPS13D-210ENST00000489961 NSUN6Q8TEA1 469 aaKnown RBP12.5□□□□□ -0.41
VPS13D-210ENST00000489961 TMX3Q96JJ7 454 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 PURBQ96QR8 312 aaKnown RBP12.5□□□□□ -0.41
VPS13D-210ENST00000489961 TAAR1Q96RJ0 339 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 RMDN3Q96TC7 470 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 C6orf50Q9HD87 102 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 HMX1Q9NP08 348 aaPredicted RBP12.5□□□□□ -0.41
VPS13D-210ENST00000489961 RIC8AQ9NPQ8 531 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 NRBP1Q9UHY1 535 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 CNPY2Q9Y2B0 182 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 MCM3APO60318 1980 aa12.5□□□□□ -0.41
VPS13D-210ENST00000489961 ASTN1O14525 1302 aa12.49□□□□□ -0.41
VPS13D-210ENST00000489961 RPTORQ8N122 1335 aa12.49□□□□□ -0.41
VPS13D-210ENST00000489961 ESYT2A0FGR8 921 aa12.49□□□□□ -0.41
VPS13D-210ENST00000489961 MEIS2O14770 477 aa12.49□□□□□ -0.41
VPS13D-210ENST00000489961 MYCP01106 439 aaPredicted RBP12.49□□□□□ -0.41
VPS13D-210ENST00000489961 IGHA2P01877 340 aa12.49□□□□□ -0.41
VPS13D-210ENST00000489961 GNA11P29992 359 aa12.49□□□□□ -0.41
VPS13D-210ENST00000489961 ST3GAL1Q11201 340 aa12.49□□□□□ -0.41
VPS13D-210ENST00000489961 MAP3K21Q5TCX8 1036 aa12.49□□□□□ -0.41
VPS13D-210ENST00000489961 USP17L6PQ6QN14 398 aa12.49□□□□□ -0.41
VPS13D-210ENST00000489961 IWS1Q96ST2 819 aa12.49□□□□□ -0.41
VPS13D-210ENST00000489961 ABHD16BQ9H3Z7 469 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms