RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 GRB10Q13322 594 aa29.77■■■□□ 2.36
KCNC4-207ENST00000489935 GIMAP8Q8ND71 665 aaPredicted RBP29.77■■■□□ 2.36
KCNC4-207ENST00000489935 GMCL1P1Q8NEA9 526 aa29.77■■■□□ 2.36
KCNC4-207ENST00000489935 GMLQ99445 158 aa29.77■■■□□ 2.36
KCNC4-207ENST00000489935 C7orf25Q9BPX7 421 aa29.77■■■□□ 2.36
KCNC4-207ENST00000489935 TRIM9Q9C026 710 aa29.77■■■□□ 2.36
KCNC4-207ENST00000489935 LIMA1Q9UHB6 759 aaKnown RBP29.77■■■□□ 2.36
KCNC4-207ENST00000489935 USP17L15C9J2P7 530 aa29.76■■■□□ 2.35
KCNC4-207ENST00000489935 USP17L13C9JLJ4 530 aa29.76■■■□□ 2.35
KCNC4-207ENST00000489935 USP17L11C9JVI0 530 aa29.76■■■□□ 2.35
KCNC4-207ENST00000489935 USP17L18D6R9N7 530 aa29.76■■■□□ 2.35
KCNC4-207ENST00000489935 USP17L22D6RA61 530 aa29.76■■■□□ 2.35
KCNC4-207ENST00000489935 USP17L17D6RBQ6 530 aa29.76■■■□□ 2.35
KCNC4-207ENST00000489935 USP17L19D6RCP7 530 aa29.76■■■□□ 2.35
KCNC4-207ENST00000489935 USP17L20D6RJB6 530 aa29.76■■■□□ 2.35
KCNC4-207ENST00000489935 VIL1P09327 827 aaKnown RBP29.76■■■□□ 2.35
KCNC4-207ENST00000489935 USP17L24Q0WX57 530 aa29.76■■■□□ 2.35
KCNC4-207ENST00000489935 KRT31Q15323 416 aa29.76■■■□□ 2.35
KCNC4-207ENST00000489935 RBM26Q5T8P6 1007 aaKnown RBP29.76■■■□□ 2.35
KCNC4-207ENST00000489935 USP17L6PQ6QN14 398 aa29.76■■■□□ 2.35
KCNC4-207ENST00000489935 CALML4Q96GE6 196 aa29.76■■■□□ 2.35
KCNC4-207ENST00000489935 PNMA5Q96PV4 448 aa29.76■■■□□ 2.35
KCNC4-207ENST00000489935 LRRC10BA6NIK2 292 aa29.75■■■□□ 2.35
KCNC4-207ENST00000489935 NDUFB10O96000 172 aa29.75■■■□□ 2.35
KCNC4-207ENST00000489935 LARGE2Q8N3Y3 721 aa29.75■■■□□ 2.35
KCNC4-207ENST00000489935 CLRN2A0PK11 232 aa29.75■■■□□ 2.35
KCNC4-207ENST00000489935 TRIM49BA6NDI0 452 aa29.75■■■□□ 2.35
KCNC4-207ENST00000489935 PMS1P54277 932 aaKnown RBP29.75■■■□□ 2.35
KCNC4-207ENST00000489935 SNAP25P60880 206 aa29.75■■■□□ 2.35
KCNC4-207ENST00000489935 SEMA3FQ13275 785 aa29.75■■■□□ 2.35
KCNC4-207ENST00000489935 PDIA5Q14554 519 aa29.75■■■□□ 2.35
KCNC4-207ENST00000489935 HAS1Q92839 578 aa29.75■■■□□ 2.35
KCNC4-207ENST00000489935 GMCL1Q96IK5 515 aa29.75■■■□□ 2.35
KCNC4-207ENST00000489935 POTEMA6NI47 508 aa29.74■■■□□ 2.35
KCNC4-207ENST00000489935 TMEM266Q2M3C6 531 aa29.74■■■□□ 2.35
KCNC4-207ENST00000489935 FILIP1LQ4L180 1135 aa29.74■■■□□ 2.35
KCNC4-207ENST00000489935 BAG1Q99933 345 aaPredicted RBP29.74■■■□□ 2.35
KCNC4-207ENST00000489935 BLOC1S4Q9NUP1 217 aa29.74■■■□□ 2.35
KCNC4-207ENST00000489935 DDX25Q9UHL0 483 aaKnown RBP29.74■■■□□ 2.35
KCNC4-207ENST00000489935 ZBTB12Q9Y330 459 aaPredicted RBP29.74■■■□□ 2.35
KCNC4-207ENST00000489935 A0A1W2PRG0 241 aa29.73■■■□□ 2.35
KCNC4-207ENST00000489935 CCT6AP40227 531 aaKnown RBP29.73■■■□□ 2.35
KCNC4-207ENST00000489935 TCP11X2Q5H9J9 407 aa29.73■■■□□ 2.35
KCNC4-207ENST00000489935 NUDT12Q9BQG2 462 aa29.73■■■□□ 2.35
KCNC4-207ENST00000489935 ZNF70Q9UC06 446 aaPredicted RBP29.73■■■□□ 2.35
KCNC4-207ENST00000489935 IRF2BP1Q8IU81 584 aa29.73■■■□□ 2.35
KCNC4-207ENST00000489935 KCNJ18B7U540 433 aa29.72■■■□□ 2.35
KCNC4-207ENST00000489935 H7C1D1 291 aa29.72■■■□□ 2.35
KCNC4-207ENST00000489935 KCNJ12Q14500 433 aa29.72■■■□□ 2.35
KCNC4-207ENST00000489935 GJA10Q969M2 543 aa29.72■■■□□ 2.35
KCNC4-207ENST00000489935 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.72■■■□□ 2.35
KCNC4-207ENST00000489935 ARHGAP6O43182 974 aa29.72■■■□□ 2.35
KCNC4-207ENST00000489935 RBL2Q08999 1139 aa29.72■■■□□ 2.35
KCNC4-207ENST00000489935 DLGAP5Q15398 846 aa29.72■■■□□ 2.35
KCNC4-207ENST00000489935 GLT8D2Q9H1C3 349 aa29.72■■■□□ 2.35
KCNC4-207ENST00000489935 TMOD2Q9NZR1 351 aa29.72■■■□□ 2.35
KCNC4-207ENST00000489935 COPB1P53618 953 aaKnown RBP29.71■■■□□ 2.35
KCNC4-207ENST00000489935 ASIC1P78348 528 aa29.71■■■□□ 2.35
KCNC4-207ENST00000489935 AMPD3Q01432 767 aa29.71■■■□□ 2.35
KCNC4-207ENST00000489935 PDE4DQ08499 809 aa29.71■■■□□ 2.35
KCNC4-207ENST00000489935 VPS16Q9H269 839 aa29.71■■■□□ 2.35
KCNC4-207ENST00000489935 HERC5Q9UII4 1024 aaKnown RBP29.71■■■□□ 2.35
KCNC4-207ENST00000489935 AKR1B15C9JRZ8 316 aaPredicted RBP29.7■■■□□ 2.35
KCNC4-207ENST00000489935 CTIFO43310 598 aaKnown RBP29.7■■■□□ 2.35
KCNC4-207ENST00000489935 STX10O60499 249 aa29.7■■■□□ 2.35
KCNC4-207ENST00000489935 SPAG1Q07617 926 aa29.7■■■□□ 2.35
KCNC4-207ENST00000489935 REXO1L1PQ8IX06 675 aa29.7■■■□□ 2.35
KCNC4-207ENST00000489935 RAB34Q9BZG1 259 aa29.7■■■□□ 2.35
KCNC4-207ENST00000489935 TAB2Q9NYJ8 693 aa29.7■■■□□ 2.35
KCNC4-207ENST00000489935 MEIS2O14770 477 aa29.7■■■□□ 2.34
KCNC4-207ENST00000489935 STK4Q13043 487 aa29.7■■■□□ 2.34
KCNC4-207ENST00000489935 MCM6Q14566 821 aa29.7■■■□□ 2.34
KCNC4-207ENST00000489935 SV2BQ7L1I2 683 aa29.7■■■□□ 2.34
KCNC4-207ENST00000489935 FAM151AQ8WW52 585 aa29.7■■■□□ 2.34
KCNC4-207ENST00000489935 P2RX7Q99572 595 aaKnown RBP29.7■■■□□ 2.34
KCNC4-207ENST00000489935 STK17AQ9UEE5 414 aa29.7■■■□□ 2.34
KCNC4-207ENST00000489935 CNTNAP1P78357 1384 aa29.69■■■□□ 2.34
KCNC4-207ENST00000489935 KIF2AO00139 706 aaPredicted RBP29.69■■■□□ 2.34
KCNC4-207ENST00000489935 N4BP3O15049 544 aa29.69■■■□□ 2.34
KCNC4-207ENST00000489935 BMP3P12645 472 aa29.69■■■□□ 2.34
KCNC4-207ENST00000489935 GCFC2P16383 781 aaKnown RBP29.69■■■□□ 2.34
KCNC4-207ENST00000489935 BAG6P46379 1132 aa29.69■■■□□ 2.34
KCNC4-207ENST00000489935 STIM1Q13586 685 aa29.69■■■□□ 2.34
KCNC4-207ENST00000489935 SYDE2Q5VT97 1194 aa29.69■■■□□ 2.34
KCNC4-207ENST00000489935 FCHSD1Q86WN1 690 aa29.69■■■□□ 2.34
KCNC4-207ENST00000489935 CREBRFQ8IUR6 639 aa29.69■■■□□ 2.34
KCNC4-207ENST00000489935 AMNQ9BXJ7 453 aa29.69■■■□□ 2.34
KCNC4-207ENST00000489935 EXOC1Q9NV70 894 aa29.69■■■□□ 2.34
KCNC4-207ENST00000489935 HDAC9Q9UKV0 1011 aa29.69■■■□□ 2.34
KCNC4-207ENST00000489935 PSMA7O14818 248 aa29.68■■■□□ 2.34
KCNC4-207ENST00000489935 FCER1AP12319 257 aa29.68■■■□□ 2.34
KCNC4-207ENST00000489935 SNX29Q8TEQ0 813 aa29.68■■■□□ 2.34
KCNC4-207ENST00000489935 CPLX3Q8WVH0 158 aa29.68■■■□□ 2.34
KCNC4-207ENST00000489935 ANO3Q9BYT9 981 aa29.68■■■□□ 2.34
KCNC4-207ENST00000489935 MYMKA6NI61 221 aa29.68■■■□□ 2.34
KCNC4-207ENST00000489935 KRT79Q5XKE5 535 aa29.68■■■□□ 2.34
KCNC4-207ENST00000489935 TTI2Q6NXR4 508 aa29.68■■■□□ 2.34
KCNC4-207ENST00000489935 PPFIBP1Q86W92 1011 aa29.68■■■□□ 2.34
KCNC4-207ENST00000489935 OGFOD1Q8N543 542 aa29.68■■■□□ 2.34
KCNC4-207ENST00000489935 KIF18AQ8NI77 898 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms