RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 ERICH2A1L162 156 aa11.01□□□□□ -0.65
NOD1-208ENST00000489614 TSPY3P0CV98 308 aa11.01□□□□□ -0.65
NOD1-208ENST00000489614 TSPY8P0CW00 308 aa11.01□□□□□ -0.65
NOD1-208ENST00000489614 TOP1P11387 765 aaKnown RBP11.01□□□□□ -0.65
NOD1-208ENST00000489614 DLGAP5Q15398 846 aa11.01□□□□□ -0.65
NOD1-208ENST00000489614 SHROOM1Q2M3G4 852 aaPredicted RBP11.01□□□□□ -0.65
NOD1-208ENST00000489614 STK11IPQ8N1F8 1099 aa11.01□□□□□ -0.65
NOD1-208ENST00000489614 GPR161Q8N6U8 529 aaKnown RBP11.01□□□□□ -0.65
NOD1-208ENST00000489614 ZKSCAN4Q969J2 545 aaPredicted RBP11.01□□□□□ -0.65
NOD1-208ENST00000489614 L3MBTL3Q96JM7 780 aaPredicted RBP11.01□□□□□ -0.65
NOD1-208ENST00000489614 GPRC5DQ9NZD1 345 aa11.01□□□□□ -0.65
NOD1-208ENST00000489614 NYAP2Q9P242 653 aa11.01□□□□□ -0.65
NOD1-208ENST00000489614 ATP6V1DQ9Y5K8 247 aa11.01□□□□□ -0.65
NOD1-208ENST00000489614 PITPNM2Q9BZ72 1349 aa11.01□□□□□ -0.65
NOD1-208ENST00000489614 LRRC37A2A6NM11 1700 aa11.01□□□□□ -0.65
NOD1-208ENST00000489614 KIF28PB7ZC32 967 aa11□□□□□ -0.65
NOD1-208ENST00000489614 INPP5BP32019 993 aa11□□□□□ -0.65
NOD1-208ENST00000489614 NAP1L1P55209 391 aaKnown RBP11□□□□□ -0.65
NOD1-208ENST00000489614 KIF23Q02241 960 aaPredicted RBP11□□□□□ -0.65
NOD1-208ENST00000489614 ADCY2Q08462 1091 aa11□□□□□ -0.65
NOD1-208ENST00000489614 NAA25Q14CX7 972 aa11□□□□□ -0.65
NOD1-208ENST00000489614 CATIPQ7Z7H3 387 aa11□□□□□ -0.65
NOD1-208ENST00000489614 RAB11FIP4Q86YS3 637 aa11□□□□□ -0.65
NOD1-208ENST00000489614 CDAN1Q8IWY9 1227 aa11□□□□□ -0.65
NOD1-208ENST00000489614 PNMA1Q8ND90 353 aa11□□□□□ -0.65
NOD1-208ENST00000489614 PHF20Q9BVI0 1012 aa11□□□□□ -0.65
NOD1-208ENST00000489614 SPZ1Q9BXG8 430 aa11□□□□□ -0.65
NOD1-208ENST00000489614 MKNK2Q9HBH9 465 aa11□□□□□ -0.65
NOD1-208ENST00000489614 SPATS2LQ9NUQ6 558 aaKnown RBP11□□□□□ -0.65
NOD1-208ENST00000489614 TFIP11Q9UBB9 837 aaKnown RBP11□□□□□ -0.65
NOD1-208ENST00000489614 MCM8Q9UJA3 840 aa11□□□□□ -0.65
NOD1-208ENST00000489614 ENO4A6NNW6 628 aa11□□□□□ -0.65
NOD1-208ENST00000489614 FANCGO15287 622 aa11□□□□□ -0.65
NOD1-208ENST00000489614 HLA-DOAP06340 250 aa11□□□□□ -0.65
NOD1-208ENST00000489614 ZNF444Q8N0Y2 327 aaPredicted RBP11□□□□□ -0.65
NOD1-208ENST00000489614 GMCL1P1Q8NEA9 526 aa11□□□□□ -0.65
NOD1-208ENST00000489614 CCDC26Q8TAB7 109 aa11□□□□□ -0.65
NOD1-208ENST00000489614 PHKBQ93100 1093 aa11□□□□□ -0.65
NOD1-208ENST00000489614 AIFM3Q96NN9 605 aa11□□□□□ -0.65
NOD1-208ENST00000489614 PAIP2Q9BPZ3 127 aaKnown RBP11□□□□□ -0.65
NOD1-208ENST00000489614 RIOX1Q9H6W3 641 aa11□□□□□ -0.65
NOD1-208ENST00000489614 ZNF112Q9UJU3 913 aa11□□□□□ -0.65
NOD1-208ENST00000489614 WDR3Q9UNX4 943 aaKnown RBP eCLIP11□□□□□ -0.65
NOD1-208ENST00000489614 TRPM7Q96QT4 1865 aa11□□□□□ -0.65
NOD1-208ENST00000489614 SMCHD1A6NHR9 2005 aa11□□□□□ -0.65
NOD1-208ENST00000489614 CTAGE5O15320 804 aa11□□□□□ -0.65
NOD1-208ENST00000489614 DEXIO95424 95 aa11□□□□□ -0.65
NOD1-208ENST00000489614 PDHBP11177 359 aa11□□□□□ -0.65
NOD1-208ENST00000489614 ERCC3P19447 782 aa11□□□□□ -0.65
NOD1-208ENST00000489614 SLC4A8Q2Y0W8 1093 aa11□□□□□ -0.65
NOD1-208ENST00000489614 ARMC2Q8NEN0 867 aa11□□□□□ -0.65
NOD1-208ENST00000489614 CABS1Q96KC9 395 aa11□□□□□ -0.65
NOD1-208ENST00000489614 ASTN2O75129 1339 aaPredicted RBP10.99□□□□□ -0.65
NOD1-208ENST00000489614 HIRAP54198 1017 aaPredicted RBP10.99□□□□□ -0.65
NOD1-208ENST00000489614 PPP2R3AQ06190 1150 aa10.99□□□□□ -0.65
NOD1-208ENST00000489614 ATL3Q6DD88 541 aa10.99□□□□□ -0.65
NOD1-208ENST00000489614 MICALL2Q8IY33 904 aa10.99□□□□□ -0.65
NOD1-208ENST00000489614 STAG2Q8N3U4 1231 aa10.99□□□□□ -0.65
NOD1-208ENST00000489614 DDX11Q96FC9 970 aa10.99□□□□□ -0.65
NOD1-208ENST00000489614 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.99□□□□□ -0.65
NOD1-208ENST00000489614 EBAG9O00559 213 aa10.99□□□□□ -0.65
NOD1-208ENST00000489614 RPSAP08865 295 aaKnown RBP10.99□□□□□ -0.65
NOD1-208ENST00000489614 PFKFB3Q16875 520 aaPredicted RBP10.99□□□□□ -0.65
NOD1-208ENST00000489614 NFXL1Q6ZNB6 911 aa10.99□□□□□ -0.65
NOD1-208ENST00000489614 RASGRP2Q7LDG7 609 aa10.99□□□□□ -0.65
NOD1-208ENST00000489614 ANKRD33BA6NCL7 494 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 TTLL1O95922 423 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 MMP1P03956 469 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 EIF6P56537 245 aaKnown RBP10.98□□□□□ -0.65
NOD1-208ENST00000489614 SSRP1Q08945 709 aaKnown RBP10.98□□□□□ -0.65
NOD1-208ENST00000489614 C11orf57Q6ZUT1 292 aaPredicted RBP10.98□□□□□ -0.65
NOD1-208ENST00000489614 SH3GL3Q99963 347 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 ACBD3Q9H3P7 528 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 SH3GLB2Q9NR46 395 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 GJB4Q9NTQ9 266 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 CNOT7Q9UIV1 285 aaKnown RBP10.98□□□□□ -0.65
NOD1-208ENST00000489614 MAP2K7O14733 419 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 TMEM179Q6ZVK1 233 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 OGFOD1Q8N543 542 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 DAGLBQ8NCG7 672 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 LZTS2Q9BRK4 669 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 KINO60870 393 aaKnown RBP10.98□□□□□ -0.65
NOD1-208ENST00000489614 NR1I2O75469 434 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 EIF3JO75822 258 aaKnown RBP10.98□□□□□ -0.65
NOD1-208ENST00000489614 TCP10Q12799 353 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 KRT40Q6A162 431 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 HDXQ7Z353 690 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 TMC6Q7Z403 805 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 TRPM4Q8TD43 1214 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 MRFAP1L1Q96HT8 127 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 FAM107BQ9H098 131 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 KAT14Q9H8E8 782 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 GINM1Q9NU53 330 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 SAMM50Q9Y512 469 aa10.98□□□□□ -0.65
NOD1-208ENST00000489614 ECEL1O95672 775 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 SFPQP23246 707 aaKnown RBP eCLIP10.97□□□□□ -0.65
NOD1-208ENST00000489614 CDC25BP30305 580 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 KIF4BQ2VIQ3 1234 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 TRIM74Q86UV6 250 aa10.97□□□□□ -0.65
NOD1-208ENST00000489614 TRIM73Q86UV7 250 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms