RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 CNTNAP5Q8WYK1 1306 aa14.22□□□□□ -0.13
SMARCD3-213ENST00000489503 SEPT4O43236 478 aa14.22□□□□□ -0.13
SMARCD3-213ENST00000489503 ADCY6O43306 1168 aa14.22□□□□□ -0.13
SMARCD3-213ENST00000489503 MYCNP04198 464 aaPredicted RBP14.22□□□□□ -0.13
SMARCD3-213ENST00000489503 PSMA5P28066 241 aa14.22□□□□□ -0.13
SMARCD3-213ENST00000489503 CDC27P30260 824 aa14.22□□□□□ -0.13
SMARCD3-213ENST00000489503 ALDH5A1P51649 535 aaPredicted RBP14.22□□□□□ -0.13
SMARCD3-213ENST00000489503 SYNE3Q6ZMZ3 975 aa14.22□□□□□ -0.13
SMARCD3-213ENST00000489503 UBE2Q1Q7Z7E8 422 aa14.22□□□□□ -0.13
SMARCD3-213ENST00000489503 KATNBL1Q9H079 304 aa14.22□□□□□ -0.13
SMARCD3-213ENST00000489503 ZSWIM6Q9HCJ5 1215 aa14.22□□□□□ -0.13
SMARCD3-213ENST00000489503 PNMA2Q9UL42 364 aa14.22□□□□□ -0.13
SMARCD3-213ENST00000489503 MRPL11Q9Y3B7 192 aaKnown RBP14.22□□□□□ -0.13
SMARCD3-213ENST00000489503 PNMA6FA0A0J9YX94 578 aa14.21□□□□□ -0.13
SMARCD3-213ENST00000489503 CFBP00751 764 aa14.21□□□□□ -0.13
SMARCD3-213ENST00000489503 HOXA13P31271 388 aaPredicted RBP14.21□□□□□ -0.13
SMARCD3-213ENST00000489503 IRX5P78411 483 aaPredicted RBP14.21□□□□□ -0.13
SMARCD3-213ENST00000489503 ACVR2BQ13705 512 aa14.21□□□□□ -0.13
SMARCD3-213ENST00000489503 TOB2Q14106 344 aaPredicted RBP14.21□□□□□ -0.13
SMARCD3-213ENST00000489503 RUFY3Q7L099 469 aa14.21□□□□□ -0.13
SMARCD3-213ENST00000489503 MSL3Q8N5Y2 521 aaKnown RBP14.21□□□□□ -0.13
SMARCD3-213ENST00000489503 SYTL5Q8TDW5 730 aaPredicted RBP14.21□□□□□ -0.13
SMARCD3-213ENST00000489503 RRP36Q96EU6 259 aaKnown RBP14.21□□□□□ -0.13
SMARCD3-213ENST00000489503 PAWRQ96IZ0 340 aaKnown RBP14.21□□□□□ -0.13
SMARCD3-213ENST00000489503 FAM217BQ9NTX9 383 aaPredicted RBP14.21□□□□□ -0.13
SMARCD3-213ENST00000489503 CYP46A1Q9Y6A2 500 aa14.21□□□□□ -0.13
SMARCD3-213ENST00000489503 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.2□□□□□ -0.14
SMARCD3-213ENST00000489503 PPFIA3O75145 1194 aa14.2□□□□□ -0.14
SMARCD3-213ENST00000489503 GNAQP50148 359 aa14.2□□□□□ -0.14
SMARCD3-213ENST00000489503 METAP2P50579 478 aaKnown RBP eCLIP14.2□□□□□ -0.14
SMARCD3-213ENST00000489503 TMEM63BQ5T3F8 832 aa14.2□□□□□ -0.14
SMARCD3-213ENST00000489503 GJC2Q5T442 439 aaPredicted RBP14.2□□□□□ -0.14
SMARCD3-213ENST00000489503 GPKOWQ92917 476 aaPredicted RBP eCLIP14.2□□□□□ -0.14
SMARCD3-213ENST00000489503 TAAR1Q96RJ0 339 aa14.2□□□□□ -0.14
SMARCD3-213ENST00000489503 LZTS2Q9BRK4 669 aa14.2□□□□□ -0.14
SMARCD3-213ENST00000489503 PDGFCQ9NRA1 345 aa14.2□□□□□ -0.14
SMARCD3-213ENST00000489503 SEC63Q9UGP8 760 aaKnown RBP14.2□□□□□ -0.14
SMARCD3-213ENST00000489503 NRBP1Q9UHY1 535 aa14.2□□□□□ -0.14
SMARCD3-213ENST00000489503 GTF3C3Q9Y5Q9 886 aa14.2□□□□□ -0.14
SMARCD3-213ENST00000489503 MKI67P46013 3256 aaKnown RBP14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 ASB14A6NK59 587 aa14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 MSCO60682 206 aa14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 PGK1P00558 417 aa14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 AKR1A1P14550 325 aa14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 ADD1P35611 737 aaKnown RBP14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 ADCYAP1R1P41586 468 aa14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 FUT2Q10981 343 aa14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 CCDC144BQ3MJ40 725 aa14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 MCF2L2Q86YR7 1114 aa14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 AGXT2Q9BYV1 514 aa14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 TM6SF1Q9BZW5 370 aa14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 ABHD16BQ9H3Z7 469 aa14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 NCOA5Q9HCD5 579 aaKnown RBP14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 XPNPEP3Q9NQH7 507 aa14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 RBM28Q9NW13 759 aaKnown RBP14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 ADD3Q9UEY8 706 aaKnown RBP14.19□□□□□ -0.14
SMARCD3-213ENST00000489503 MYADML2A6NDP7 307 aa14.18□□□□□ -0.14
SMARCD3-213ENST00000489503 RARBP10826 455 aa14.18□□□□□ -0.14
SMARCD3-213ENST00000489503 EIF2AK2P19525 551 aaKnown RBP14.18□□□□□ -0.14
SMARCD3-213ENST00000489503 HSD17B4P51659 736 aa14.18□□□□□ -0.14
SMARCD3-213ENST00000489503 CCT2P78371 535 aaKnown RBP14.18□□□□□ -0.14
SMARCD3-213ENST00000489503 NOL8Q76FK4 1167 aaKnown RBP14.18□□□□□ -0.14
SMARCD3-213ENST00000489503 HEATR3Q7Z4Q2 680 aa14.18□□□□□ -0.14
SMARCD3-213ENST00000489503 FCHSD1Q86WN1 690 aa14.18□□□□□ -0.14
SMARCD3-213ENST00000489503 ANKLE1Q8NAG6 615 aa14.18□□□□□ -0.14
SMARCD3-213ENST00000489503 RGS22Q8NE09 1264 aa14.18□□□□□ -0.14
SMARCD3-213ENST00000489503 IL31RAQ8NI17 732 aa14.18□□□□□ -0.14
SMARCD3-213ENST00000489503 MORC4Q8TE76 937 aa14.18□□□□□ -0.14
SMARCD3-213ENST00000489503 PDRG1Q9NUG6 133 aa14.18□□□□□ -0.14
SMARCD3-213ENST00000489503 PCDH10Q9P2E7 1040 aa14.18□□□□□ -0.14
SMARCD3-213ENST00000489503 NID2Q14112 1375 aa14.18□□□□□ -0.14
SMARCD3-213ENST00000489503 SYNRGQ9UMZ2 1314 aa14.17□□□□□ -0.14
SMARCD3-213ENST00000489503 DTNBO60941 627 aa14.17□□□□□ -0.14
SMARCD3-213ENST00000489503 EDNRBP24530 442 aa14.17□□□□□ -0.14
SMARCD3-213ENST00000489503 SMARCA1P28370 1054 aa14.17□□□□□ -0.14
SMARCD3-213ENST00000489503 PDE4DQ08499 809 aa14.17□□□□□ -0.14
SMARCD3-213ENST00000489503 STK3Q13188 491 aa14.17□□□□□ -0.14
SMARCD3-213ENST00000489503 LRRC41Q15345 812 aa14.17□□□□□ -0.14
SMARCD3-213ENST00000489503 WWC2Q6AWC2 1192 aa14.17□□□□□ -0.14
SMARCD3-213ENST00000489503 NECAB2Q7Z6G3 386 aa14.17□□□□□ -0.14
SMARCD3-213ENST00000489503 ZFP91Q96JP5 570 aaPredicted RBP14.17□□□□□ -0.14
SMARCD3-213ENST00000489503 RMDN3Q96TC7 470 aa14.17□□□□□ -0.14
SMARCD3-213ENST00000489503 C11orf49Q9H6J7 331 aa14.17□□□□□ -0.14
SMARCD3-213ENST00000489503 FAM184BQ9ULE4 1060 aa14.17□□□□□ -0.14
SMARCD3-213ENST00000489503 GCOM1H8Y6P7 765 aaPredicted RBP14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 ADAMTS4O75173 837 aa14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 POLR2MP0CAP2 368 aa14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 SMPD1P17405 629 aa14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 PDIA3P30101 505 aaKnown RBP14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 RCAN1P53805 252 aa14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 ANAPC15P60006 121 aa14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 GHRHRQ02643 423 aa14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 UBE2SQ16763 222 aa14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 TYW1BQ6NUM6 668 aa14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 TAPT1Q6NXT6 567 aa14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 USP17L6PQ6QN14 398 aa14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 FBXL16Q8N461 479 aa14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 DNERQ8NFT8 737 aa14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 PHKBQ93100 1093 aa14.16□□□□□ -0.14
SMARCD3-213ENST00000489503 VTA1Q9NP79 307 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms