RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 ZSWIM8A7E2V4 1837 aa16.34■□□□□ 0.21
CLDN11-209ENST00000489485 GCOM1H8Y6P7 765 aaPredicted RBP16.34■□□□□ 0.21
CLDN11-209ENST00000489485 STRNO43815 780 aa16.34■□□□□ 0.21
CLDN11-209ENST00000489485 FKTNO75072 461 aa16.34■□□□□ 0.21
CLDN11-209ENST00000489485 POLR2MP0CAP2 368 aa16.34■□□□□ 0.21
CLDN11-209ENST00000489485 CALML3P27482 149 aa16.34■□□□□ 0.21
CLDN11-209ENST00000489485 HOXA13P31271 388 aaPredicted RBP16.34■□□□□ 0.21
CLDN11-209ENST00000489485 FCGRTP55899 365 aa16.34■□□□□ 0.21
CLDN11-209ENST00000489485 RPS6P62753 249 aaKnown RBP16.34■□□□□ 0.21
CLDN11-209ENST00000489485 BAATQ14032 418 aaPredicted RBP16.34■□□□□ 0.21
CLDN11-209ENST00000489485 USP17L6PQ6QN14 398 aa16.34■□□□□ 0.21
CLDN11-209ENST00000489485 PHF20Q9BVI0 1012 aa16.34■□□□□ 0.21
CLDN11-209ENST00000489485 RIC8AQ9NPQ8 531 aa16.34■□□□□ 0.21
CLDN11-209ENST00000489485 CIZ1Q9ULV3 898 aaPredicted RBP16.34■□□□□ 0.21
CLDN11-209ENST00000489485 ESYT2A0FGR8 921 aa16.33■□□□□ 0.21
CLDN11-209ENST00000489485 CTGFP29279 349 aa16.33■□□□□ 0.21
CLDN11-209ENST00000489485 NUCB2P80303 420 aa16.33■□□□□ 0.21
CLDN11-209ENST00000489485 UBE2SQ16763 222 aa16.33■□□□□ 0.21
CLDN11-209ENST00000489485 CD99L2Q8TCZ2 262 aa16.33■□□□□ 0.21
CLDN11-209ENST00000489485 GLT8D2Q9H1C3 349 aa16.33■□□□□ 0.21
CLDN11-209ENST00000489485 CYP39A1Q9NYL5 469 aa16.33■□□□□ 0.21
CLDN11-209ENST00000489485 MTMR6Q9Y217 621 aa16.33■□□□□ 0.21
CLDN11-209ENST00000489485 ZDHHC9Q9Y397 364 aa16.33■□□□□ 0.21
CLDN11-209ENST00000489485 PFASO15067 1338 aa16.33■□□□□ 0.21
CLDN11-209ENST00000489485 MEIS2O14770 477 aa16.33■□□□□ 0.2
CLDN11-209ENST00000489485 MMP1P03956 469 aa16.33■□□□□ 0.2
CLDN11-209ENST00000489485 PGK2P07205 417 aa16.33■□□□□ 0.2
CLDN11-209ENST00000489485 PTPREP23469 700 aa16.33■□□□□ 0.2
CLDN11-209ENST00000489485 NOM1Q5C9Z4 860 aaKnown RBP16.33■□□□□ 0.2
CLDN11-209ENST00000489485 MCTP1Q6DN14 999 aa16.33■□□□□ 0.2
CLDN11-209ENST00000489485 SLC30A10Q6XR72 485 aa16.33■□□□□ 0.2
CLDN11-209ENST00000489485 FCHSD1Q86WN1 690 aa16.33■□□□□ 0.2
CLDN11-209ENST00000489485 FAM177A1Q8N128 213 aaPredicted RBP16.33■□□□□ 0.2
CLDN11-209ENST00000489485 RGS22Q8NE09 1264 aa16.33■□□□□ 0.2
CLDN11-209ENST00000489485 BICD2Q8TD16 824 aa16.33■□□□□ 0.2
CLDN11-209ENST00000489485 TRIM47Q96LD4 638 aa16.33■□□□□ 0.2
CLDN11-209ENST00000489485 BIN2Q9UBW5 565 aaPredicted RBP16.33■□□□□ 0.2
CLDN11-209ENST00000489485 PCDHA4Q9UN74 947 aa16.33■□□□□ 0.2
CLDN11-209ENST00000489485 HSPA1AP0DMV8 641 aaKnown RBP16.32■□□□□ 0.2
CLDN11-209ENST00000489485 HSPA1BP0DMV9 641 aaKnown RBP16.32■□□□□ 0.2
CLDN11-209ENST00000489485 ADORA2AP29274 412 aa16.32■□□□□ 0.2
CLDN11-209ENST00000489485 SAFBQ15424 915 aaKnown RBP eCLIP16.32■□□□□ 0.2
CLDN11-209ENST00000489485 GALNT17Q6IS24 598 aa16.32■□□□□ 0.2
CLDN11-209ENST00000489485 FERMT3Q86UX7 667 aa16.32■□□□□ 0.2
CLDN11-209ENST00000489485 REXO1Q8N1G1 1221 aaKnown RBP16.32■□□□□ 0.2
CLDN11-209ENST00000489485 ERO1AQ96HE7 468 aa16.32■□□□□ 0.2
CLDN11-209ENST00000489485 BRMS1Q9HCU9 246 aa16.32■□□□□ 0.2
CLDN11-209ENST00000489485 POTEB2H3BUK9 544 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 PIK3CDO00329 1044 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 ADAMTS3O15072 1205 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 BRD1O95696 1058 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 ZSCAN22P10073 491 aaPredicted RBP16.31■□□□□ 0.2
CLDN11-209ENST00000489485 PDIA4P13667 645 aaKnown RBP16.31■□□□□ 0.2
CLDN11-209ENST00000489485 HSD17B4P51659 736 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 GNL2Q13823 731 aaKnown RBP16.31■□□□□ 0.2
CLDN11-209ENST00000489485 DPP9Q86TI2 863 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 DIS3L2Q8IYB7 885 aaKnown RBP16.31■□□□□ 0.2
CLDN11-209ENST00000489485 BLIDQ8IZY5 108 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 ABRAQ8N0Z2 381 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 RASGRP4Q8TDF6 673 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 PURBQ96QR8 312 aaKnown RBP16.31■□□□□ 0.2
CLDN11-209ENST00000489485 MAP3K20Q9NYL2 800 aaKnown RBP16.31■□□□□ 0.2
CLDN11-209ENST00000489485 CASP8AP2Q9UKL3 1982 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 SLC15A5A6NIM6 579 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 SPDYE3A6NKU9 549 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 FOXN1O15353 648 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 KRT2P35908 639 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 CAP1Q01518 475 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 GRB14Q14449 540 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 NPY5RQ15761 445 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 JAKMIP3Q5VZ66 844 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.31■□□□□ 0.2
CLDN11-209ENST00000489485 SAMD3Q8N6K7 520 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 OXER1Q8TDS5 423 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 SYTL5Q8TDW5 730 aaPredicted RBP16.31■□□□□ 0.2
CLDN11-209ENST00000489485 NUDT12Q9BQG2 462 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 TMEM260Q9NX78 707 aa16.31■□□□□ 0.2
CLDN11-209ENST00000489485 BTBD18B2RXH4 712 aa16.3■□□□□ 0.2
CLDN11-209ENST00000489485 CNTN2Q02246 1040 aa16.3■□□□□ 0.2
CLDN11-209ENST00000489485 DAGLBQ8NCG7 672 aa16.3■□□□□ 0.2
CLDN11-209ENST00000489485 COL20A1Q9P218 1284 aa16.3■□□□□ 0.2
CLDN11-209ENST00000489485 PLXNA1Q9UIW2 1896 aa16.3■□□□□ 0.2
CLDN11-209ENST00000489485 GHRHRQ02643 423 aa16.29■□□□□ 0.2
CLDN11-209ENST00000489485 NR5A1Q13285 461 aa16.29■□□□□ 0.2
CLDN11-209ENST00000489485 ARHGEF6Q15052 776 aa16.29■□□□□ 0.2
CLDN11-209ENST00000489485 FOXD4L6Q3SYB3 417 aaPredicted RBP16.29■□□□□ 0.2
CLDN11-209ENST00000489485 FOXD4L3Q6VB84 417 aaPredicted RBP16.29■□□□□ 0.2
CLDN11-209ENST00000489485 PGBD1Q96JS3 809 aa16.29■□□□□ 0.2
CLDN11-209ENST00000489485 MAF1Q9H063 256 aa16.29■□□□□ 0.2
CLDN11-209ENST00000489485 LCTP09848 1927 aa16.29■□□□□ 0.2
CLDN11-209ENST00000489485 COBLO75128 1261 aa16.29■□□□□ 0.2
CLDN11-209ENST00000489485 F13A1P00488 732 aa16.29■□□□□ 0.2
CLDN11-209ENST00000489485 CLK2P49760 499 aaKnown RBP16.29■□□□□ 0.2
CLDN11-209ENST00000489485 MAP2K5Q13163 448 aa16.29■□□□□ 0.2
CLDN11-209ENST00000489485 MORN1Q5T089 497 aa16.29■□□□□ 0.2
CLDN11-209ENST00000489485 SOCS4Q8WXH5 440 aa16.29■□□□□ 0.2
CLDN11-209ENST00000489485 TAAR1Q96RJ0 339 aa16.29■□□□□ 0.2
CLDN11-209ENST00000489485 RMDN3Q96TC7 470 aa16.29■□□□□ 0.2
CLDN11-209ENST00000489485 SLC5A4Q9NY91 659 aa16.29■□□□□ 0.2
CLDN11-209ENST00000489485 PCDHA6Q9UN73 950 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms