RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 PBX2P40425 430 aa11.03□□□□□ -0.64
SNX17-207ENST00000489402 ALDH5A1P51649 535 aaPredicted RBP11.03□□□□□ -0.64
SNX17-207ENST00000489402 CCL23P55773 120 aa11.03□□□□□ -0.64
SNX17-207ENST00000489402 PSMC6P62333 389 aa11.03□□□□□ -0.64
SNX17-207ENST00000489402 PWP2Q15269 919 aaKnown RBP11.03□□□□□ -0.64
SNX17-207ENST00000489402 ALX1Q15699 326 aa11.03□□□□□ -0.64
SNX17-207ENST00000489402 DUSP28Q4G0W2 176 aa11.03□□□□□ -0.64
SNX17-207ENST00000489402 TAPT1Q6NXT6 567 aa11.03□□□□□ -0.64
SNX17-207ENST00000489402 BTNL9Q6UXG8 535 aa11.03□□□□□ -0.64
SNX17-207ENST00000489402 RPUSD2Q8IZ73 545 aaKnown RBP11.03□□□□□ -0.64
SNX17-207ENST00000489402 USP38Q8NB14 1042 aa11.03□□□□□ -0.64
SNX17-207ENST00000489402 MORC4Q8TE76 937 aa11.03□□□□□ -0.64
SNX17-207ENST00000489402 FAM227BQ96M60 508 aa11.03□□□□□ -0.64
SNX17-207ENST00000489402 CRBNQ96SW2 442 aa11.03□□□□□ -0.64
SNX17-207ENST00000489402 PRDM12Q9H4Q4 367 aa11.03□□□□□ -0.64
SNX17-207ENST00000489402 GPCPD1Q9NPB8 672 aa11.03□□□□□ -0.64
SNX17-207ENST00000489402 POLR3EQ9NVU0 708 aa11.03□□□□□ -0.64
SNX17-207ENST00000489402 UMODL1Q5DID0 1318 aa11.03□□□□□ -0.64
SNX17-207ENST00000489402 FRMPD2Q68DX3 1309 aaPredicted RBP11.03□□□□□ -0.64
SNX17-207ENST00000489402 RAD50Q92878 1312 aa11.03□□□□□ -0.64
SNX17-207ENST00000489402 GBF1Q92538 1859 aa11.02□□□□□ -0.64
SNX17-207ENST00000489402 NFIBO00712 420 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 FGRP09769 529 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 SUPT20HL2P0C7V6 817 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 NOVP48745 357 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 CPT1AP50416 773 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 PDE1AP54750 535 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 BAATQ14032 418 aaPredicted RBP11.02□□□□□ -0.65
SNX17-207ENST00000489402 MCMDC2Q4G0Z9 681 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 BRDTQ58F21 947 aaPredicted RBP11.02□□□□□ -0.65
SNX17-207ENST00000489402 TJAP1Q5JTD0 557 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 OTOP2Q7RTS6 562 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 TICAM2Q86XR7 235 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 PPM1EQ8WY54 764 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 VWCEQ96DN2 955 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 TMEM47Q9BQJ4 181 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 NOC4LQ9BVI4 516 aaKnown RBP11.02□□□□□ -0.65
SNX17-207ENST00000489402 WDR11Q9BZH6 1224 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 TRPV6Q9H1D0 765 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 SLC28A3Q9HAS3 691 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 PRDM6Q9NQX0 595 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 GPHNQ9NQX3 736 aaPredicted RBP11.02□□□□□ -0.65
SNX17-207ENST00000489402 TCP11L1Q9NUJ3 509 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 ZMYM6O95789 1325 aa11.02□□□□□ -0.65
SNX17-207ENST00000489402 A0A0D9SFI3 127 aa11.01□□□□□ -0.65
SNX17-207ENST00000489402 ZBBXA8MT70 800 aa11.01□□□□□ -0.65
SNX17-207ENST00000489402 B4DLN1 442 aa11.01□□□□□ -0.65
SNX17-207ENST00000489402 FGAP02671 866 aa11.01□□□□□ -0.65
SNX17-207ENST00000489402 PFKMP08237 780 aa11.01□□□□□ -0.65
SNX17-207ENST00000489402 MYL3P08590 195 aa11.01□□□□□ -0.65
SNX17-207ENST00000489402 PCP11498 1178 aaKnown RBP11.01□□□□□ -0.65
SNX17-207ENST00000489402 CALML3P27482 149 aa11.01□□□□□ -0.65
SNX17-207ENST00000489402 MRPL12P52815 198 aaKnown RBP11.01□□□□□ -0.65
SNX17-207ENST00000489402 RRP1P56182 461 aaKnown RBP11.01□□□□□ -0.65
SNX17-207ENST00000489402 PDE4DQ08499 809 aa11.01□□□□□ -0.65
SNX17-207ENST00000489402 AKNAD1Q5T1N1 836 aa11.01□□□□□ -0.65
SNX17-207ENST00000489402 RNF207Q6ZRF8 634 aa11.01□□□□□ -0.65
SNX17-207ENST00000489402 ZNF589Q86UQ0 364 aaPredicted RBP11.01□□□□□ -0.65
SNX17-207ENST00000489402 OR6J1Q8NGC5 347 aa11.01□□□□□ -0.65
SNX17-207ENST00000489402 ALDH8A1Q9H2A2 487 aaPredicted RBP11.01□□□□□ -0.65
SNX17-207ENST00000489402 NKX2-4Q9H2Z4 354 aa11.01□□□□□ -0.65
SNX17-207ENST00000489402 CXXC1Q9P0U4 656 aaPredicted RBP11.01□□□□□ -0.65
SNX17-207ENST00000489402 SLC4A7Q9Y6M7 1214 aa11.01□□□□□ -0.65
SNX17-207ENST00000489402 TRANK1O15050 2925 aa11.01□□□□□ -0.65
SNX17-207ENST00000489402 TRIM6-TRIM34B2RNG4 842 aa11□□□□□ -0.65
SNX17-207ENST00000489402 NKRFO15226 690 aaKnown RBP eCLIP11□□□□□ -0.65
SNX17-207ENST00000489402 HSPD1P10809 573 aaKnown RBP11□□□□□ -0.65
SNX17-207ENST00000489402 PDHBP11177 359 aa11□□□□□ -0.65
SNX17-207ENST00000489402 IGFBP4P22692 258 aa11□□□□□ -0.65
SNX17-207ENST00000489402 MFAP1P55081 439 aaKnown RBP11□□□□□ -0.65
SNX17-207ENST00000489402 HAND2P61296 217 aa11□□□□□ -0.65
SNX17-207ENST00000489402 PURAQ00577 322 aaKnown RBP11□□□□□ -0.65
SNX17-207ENST00000489402 PPP2R5BQ15173 497 aa11□□□□□ -0.65
SNX17-207ENST00000489402 FAM47CQ5HY64 1035 aa11□□□□□ -0.65
SNX17-207ENST00000489402 SLC30A10Q6XR72 485 aa11□□□□□ -0.65
SNX17-207ENST00000489402 MFSD6Q6ZSS7 791 aa11□□□□□ -0.65
SNX17-207ENST00000489402 DNERQ8NFT8 737 aa11□□□□□ -0.65
SNX17-207ENST00000489402 TTC14Q96N46 770 aa11□□□□□ -0.65
SNX17-207ENST00000489402 MTG1Q9BT17 334 aaPredicted RBP11□□□□□ -0.65
SNX17-207ENST00000489402 WNT8AQ9H1J5 351 aa11□□□□□ -0.65
SNX17-207ENST00000489402 CPVLQ9H3G5 476 aa11□□□□□ -0.65
SNX17-207ENST00000489402 RNF41Q9H4P4 317 aaPredicted RBP11□□□□□ -0.65
SNX17-207ENST00000489402 THEGQ9P2T0 379 aa11□□□□□ -0.65
SNX17-207ENST00000489402 TNKSO95271 1327 aa11□□□□□ -0.65
SNX17-207ENST00000489402 CCDC171Q6TFL3 1326 aa11□□□□□ -0.65
SNX17-207ENST00000489402 WDR19Q8NEZ3 1342 aa11□□□□□ -0.65
SNX17-207ENST00000489402 RBM47A0AV96 593 aaKnown RBP10.99□□□□□ -0.65
SNX17-207ENST00000489402 KPNA6O60684 536 aa10.99□□□□□ -0.65
SNX17-207ENST00000489402 ZNF543Q08ER8 600 aa10.99□□□□□ -0.65
SNX17-207ENST00000489402 NMIQ13287 307 aaPredicted RBP10.99□□□□□ -0.65
SNX17-207ENST00000489402 HDAC1Q13547 482 aaPredicted RBP10.99□□□□□ -0.65
SNX17-207ENST00000489402 GPATCH4Q5T3I0 446 aaKnown RBP10.99□□□□□ -0.65
SNX17-207ENST00000489402 PPP2R2DQ66LE6 453 aa10.99□□□□□ -0.65
SNX17-207ENST00000489402 IL27Q8NEV9 243 aa10.99□□□□□ -0.65
SNX17-207ENST00000489402 SCFD2Q8WU76 684 aa10.99□□□□□ -0.65
SNX17-207ENST00000489402 ATXN2LQ8WWM7 1075 aaKnown RBP10.99□□□□□ -0.65
SNX17-207ENST00000489402 CLEC4DQ8WXI8 215 aa10.99□□□□□ -0.65
SNX17-207ENST00000489402 ESR2Q92731 530 aa10.99□□□□□ -0.65
SNX17-207ENST00000489402 RILPL2Q969X0 211 aa10.99□□□□□ -0.65
SNX17-207ENST00000489402 SCLYQ96I15 445 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms