RNA–Protein interactions for RNA: ENST00000489283.5

PLS3-207, Transcript of plastin 3, humanhuman

TSL 1 (best)

Gene PLS3, Length 926 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-207ENST00000489283 UBA5Q9GZZ9 404 aa16.46■□□□□ 0.23
PLS3-207ENST00000489283 AP5M1Q9H0R1 490 aa16.46■□□□□ 0.23
PLS3-207ENST00000489283 ZSWIM5Q9P217 1185 aa16.46■□□□□ 0.23
PLS3-207ENST00000489283 STXBP5LQ9Y2K9 1186 aa16.46■□□□□ 0.23
PLS3-207ENST00000489283 RAD50Q92878 1312 aa16.45■□□□□ 0.22
PLS3-207ENST00000489283 LAMA2P24043 3122 aaKnown RBP16.45■□□□□ 0.22
PLS3-207ENST00000489283 KIAA1217Q5T5P2 1943 aa16.45■□□□□ 0.22
PLS3-207ENST00000489283 LOC102724159A0A0B4J2E5 919 aa16.45■□□□□ 0.22
PLS3-207ENST00000489283 DYNC1LI2O43237 492 aaPredicted RBP16.45■□□□□ 0.22
PLS3-207ENST00000489283 TIMP1P01033 207 aa16.45■□□□□ 0.22
PLS3-207ENST00000489283 RPS6P62753 249 aaKnown RBP16.45■□□□□ 0.22
PLS3-207ENST00000489283 PWP2Q15269 919 aaKnown RBP16.45■□□□□ 0.22
PLS3-207ENST00000489283 CDC37Q16543 378 aaPredicted RBP16.45■□□□□ 0.22
PLS3-207ENST00000489283 ZNF697Q5TEC3 545 aa16.45■□□□□ 0.22
PLS3-207ENST00000489283 KIAA1211Q6ZU35 1233 aa16.45■□□□□ 0.22
PLS3-207ENST00000489283 ANKS1AQ92625 1134 aa16.45■□□□□ 0.22
PLS3-207ENST00000489283 RNPC3Q96LT9 517 aaKnown RBP16.45■□□□□ 0.22
PLS3-207ENST00000489283 FAM161BQ96MY7 647 aa16.45■□□□□ 0.22
PLS3-207ENST00000489283 KRT23Q9C075 422 aa16.45■□□□□ 0.22
PLS3-207ENST00000489283 CNNM2Q9H8M5 875 aa16.45■□□□□ 0.22
PLS3-207ENST00000489283 Q9Y3F1 56 aa16.45■□□□□ 0.22
PLS3-207ENST00000489283 TLR3O15455 904 aaKnown RBP16.44■□□□□ 0.22
PLS3-207ENST00000489283 ASPRV1Q53RT3 343 aa16.44■□□□□ 0.22
PLS3-207ENST00000489283 GUCD1Q96NT3 240 aa16.44■□□□□ 0.22
PLS3-207ENST00000489283 UBAC1Q9BSL1 405 aa16.44■□□□□ 0.22
PLS3-207ENST00000489283 ZEB2O60315 1214 aa16.43■□□□□ 0.22
PLS3-207ENST00000489283 CABYRO75952 493 aa16.43■□□□□ 0.22
PLS3-207ENST00000489283 SMAD3P84022 425 aaKnown RBP16.43■□□□□ 0.22
PLS3-207ENST00000489283 DUSP28Q4G0W2 176 aa16.43■□□□□ 0.22
PLS3-207ENST00000489283 WDR11Q9BZH6 1224 aa16.43■□□□□ 0.22
PLS3-207ENST00000489283 PPP1R12CQ9BZL4 782 aa16.43■□□□□ 0.22
PLS3-207ENST00000489283 GBF1Q92538 1859 aa16.42■□□□□ 0.22
PLS3-207ENST00000489283 RBM47A0AV96 593 aaKnown RBP16.42■□□□□ 0.22
PLS3-207ENST00000489283 CD4P01730 458 aa16.42■□□□□ 0.22
PLS3-207ENST00000489283 PARP1P09874 1014 aaKnown RBP16.42■□□□□ 0.22
PLS3-207ENST00000489283 EDNRBP24530 442 aa16.42■□□□□ 0.22
PLS3-207ENST00000489283 PSMC6P62333 389 aa16.42■□□□□ 0.22
PLS3-207ENST00000489283 PDE4DQ08499 809 aa16.42■□□□□ 0.22
PLS3-207ENST00000489283 ITGA7Q13683 1181 aa16.42■□□□□ 0.22
PLS3-207ENST00000489283 IFIT1BQ5T764 474 aaKnown RBP16.42■□□□□ 0.22
PLS3-207ENST00000489283 MFSD5Q6N075 450 aa16.42■□□□□ 0.22
PLS3-207ENST00000489283 ADGRF4Q8IZF3 695 aa16.42■□□□□ 0.22
PLS3-207ENST00000489283 SLC43A3Q8NBI5 491 aa16.42■□□□□ 0.22
PLS3-207ENST00000489283 SLC17A8Q8NDX2 589 aa16.42■□□□□ 0.22
PLS3-207ENST00000489283 DNERQ8NFT8 737 aa16.42■□□□□ 0.22
PLS3-207ENST00000489283 MPHOSPH6Q99547 160 aaKnown RBP16.42■□□□□ 0.22
PLS3-207ENST00000489283 SCN10AQ9Y5Y9 1956 aa16.42■□□□□ 0.22
PLS3-207ENST00000489283 GRIN2DO15399 1336 aa16.42■□□□□ 0.22
PLS3-207ENST00000489283 ABCB11O95342 1321 aa16.42■□□□□ 0.22
PLS3-207ENST00000489283 DHX16O60231 1041 aaKnown RBP16.41■□□□□ 0.22
PLS3-207ENST00000489283 QRICH1Q2TAL8 776 aa16.41■□□□□ 0.22
PLS3-207ENST00000489283 CYB5R4Q7L1T6 521 aa16.41■□□□□ 0.22
PLS3-207ENST00000489283 OR6J1Q8NGC5 347 aa16.41■□□□□ 0.22
PLS3-207ENST00000489283 RUFY2Q8WXA3 655 aa16.41■□□□□ 0.22
PLS3-207ENST00000489283 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.41■□□□□ 0.22
PLS3-207ENST00000489283 TANC1Q9C0D5 1861 aa16.41■□□□□ 0.22
PLS3-207ENST00000489283 CSF2RAP15509 400 aa16.4■□□□□ 0.22
PLS3-207ENST00000489283 CHMLP26374 656 aa16.4■□□□□ 0.22
PLS3-207ENST00000489283 PTH1RQ03431 593 aa16.4■□□□□ 0.22
PLS3-207ENST00000489283 PPIGQ13427 754 aaKnown RBP eCLIP16.4■□□□□ 0.22
PLS3-207ENST00000489283 PPP2R5BQ15173 497 aa16.4■□□□□ 0.22
PLS3-207ENST00000489283 SEC23AQ15436 765 aa16.4■□□□□ 0.22
PLS3-207ENST00000489283 TMEM199Q8N511 208 aa16.4■□□□□ 0.22
PLS3-207ENST00000489283 RGS22Q8NE09 1264 aa16.4■□□□□ 0.22
PLS3-207ENST00000489283 B4GALT4O60513 344 aa16.39■□□□□ 0.21
PLS3-207ENST00000489283 CYP21A2P08686 494 aa16.39■□□□□ 0.21
PLS3-207ENST00000489283 CYP2C18P33260 490 aa16.39■□□□□ 0.21
PLS3-207ENST00000489283 CPT1AP50416 773 aa16.39■□□□□ 0.21
PLS3-207ENST00000489283 FBXO11Q86XK2 927 aa16.39■□□□□ 0.21
PLS3-207ENST00000489283 STAG2Q8N3U4 1231 aa16.39■□□□□ 0.21
PLS3-207ENST00000489283 SCFD2Q8WU76 684 aa16.39■□□□□ 0.21
PLS3-207ENST00000489283 TBC1D5Q92609 795 aa16.39■□□□□ 0.21
PLS3-207ENST00000489283 SEZ6LQ9BYH1 1024 aa16.39■□□□□ 0.21
PLS3-207ENST00000489283 TTYH1Q9H313 450 aaPredicted RBP16.39■□□□□ 0.21
PLS3-207ENST00000489283 JMJD4Q9H9V9 463 aa16.39■□□□□ 0.21
PLS3-207ENST00000489283 VAT1LQ9HCJ6 419 aa16.39■□□□□ 0.21
PLS3-207ENST00000489283 POLR3EQ9NVU0 708 aa16.39■□□□□ 0.21
PLS3-207ENST00000489283 COL20A1Q9P218 1284 aa16.39■□□□□ 0.21
PLS3-207ENST00000489283 UMODL1Q5DID0 1318 aa16.39■□□□□ 0.21
PLS3-207ENST00000489283 SCN5AQ14524 2016 aa16.38■□□□□ 0.21
PLS3-207ENST00000489283 B4DLN1 442 aa16.38■□□□□ 0.21
PLS3-207ENST00000489283 NKRFO15226 690 aaKnown RBP eCLIP16.38■□□□□ 0.21
PLS3-207ENST00000489283 MYL3P08590 195 aa16.38■□□□□ 0.21
PLS3-207ENST00000489283 ACRP10323 421 aa16.38■□□□□ 0.21
PLS3-207ENST00000489283 MRPL12P52815 198 aaKnown RBP16.38■□□□□ 0.21
PLS3-207ENST00000489283 PURAQ00577 322 aaKnown RBP16.38■□□□□ 0.21
PLS3-207ENST00000489283 TRDNQ13061 729 aa16.38■□□□□ 0.21
PLS3-207ENST00000489283 TMEM240Q5SV17 173 aa16.38■□□□□ 0.21
PLS3-207ENST00000489283 C16orf59Q7L2K0 433 aa16.38■□□□□ 0.21
PLS3-207ENST00000489283 SYTL5Q8TDW5 730 aaPredicted RBP16.38■□□□□ 0.21
PLS3-207ENST00000489283 COPS5Q92905 334 aa16.38■□□□□ 0.21
PLS3-207ENST00000489283 TRPV6Q9H1D0 765 aa16.38■□□□□ 0.21
PLS3-207ENST00000489283 SEMA6BQ9H3T3 888 aa16.38■□□□□ 0.21
PLS3-207ENST00000489283 HIPK3Q9H422 1215 aa16.38■□□□□ 0.21
PLS3-207ENST00000489283 MYH7BA7E2Y1 1941 aa16.37■□□□□ 0.21
PLS3-207ENST00000489283 SGSM2O43147 1006 aa16.37■□□□□ 0.21
PLS3-207ENST00000489283 ARIH2O95376 493 aa16.37■□□□□ 0.21
PLS3-207ENST00000489283 PSRC1Q6PGN9 363 aaPredicted RBP16.37■□□□□ 0.21
PLS3-207ENST00000489283 MCF2L2Q86YR7 1114 aa16.37■□□□□ 0.21
PLS3-207ENST00000489283 TAAR1Q96RJ0 339 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms