RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 CLEC4DQ8WXI8 215 aa14.36□□□□□ -0.11
COL4A5-206ENST00000489230 SHISA4Q96DD7 197 aa14.36□□□□□ -0.11
COL4A5-206ENST00000489230 RNF26Q9BY78 433 aaPredicted RBP14.36□□□□□ -0.11
COL4A5-206ENST00000489230 A1CFQ9NQ94 594 aaKnown RBP14.36□□□□□ -0.11
COL4A5-206ENST00000489230 TPCN1Q9ULQ1 816 aa14.36□□□□□ -0.11
COL4A5-206ENST00000489230 PARP14Q460N5 1801 aa14.36□□□□□ -0.11
COL4A5-206ENST00000489230 A0A0G2JMZ2 1700 aa14.35□□□□□ -0.11
COL4A5-206ENST00000489230 PTPDC1A2A3K4 754 aa14.35□□□□□ -0.11
COL4A5-206ENST00000489230 ASB14A6NK59 587 aa14.35□□□□□ -0.11
COL4A5-206ENST00000489230 PGK2P07205 417 aa14.35□□□□□ -0.11
COL4A5-206ENST00000489230 GJA8P48165 433 aa14.35□□□□□ -0.11
COL4A5-206ENST00000489230 FUT2Q10981 343 aa14.35□□□□□ -0.11
COL4A5-206ENST00000489230 BAATQ14032 418 aaPredicted RBP14.35□□□□□ -0.11
COL4A5-206ENST00000489230 SLC35G1Q2M3R5 365 aa14.35□□□□□ -0.11
COL4A5-206ENST00000489230 MUM1L1Q5H9M0 696 aa14.35□□□□□ -0.11
COL4A5-206ENST00000489230 FAM177A1Q8N128 213 aaPredicted RBP14.35□□□□□ -0.11
COL4A5-206ENST00000489230 DNERQ8NFT8 737 aa14.35□□□□□ -0.11
COL4A5-206ENST00000489230 CCDC12Q8WUD4 166 aaPredicted RBP14.35□□□□□ -0.11
COL4A5-206ENST00000489230 PIBF1Q8WXW3 757 aa14.35□□□□□ -0.11
COL4A5-206ENST00000489230 CUL5Q93034 780 aa14.35□□□□□ -0.11
COL4A5-206ENST00000489230 LARP6Q9BRS8 491 aaKnown RBP14.35□□□□□ -0.11
COL4A5-206ENST00000489230 RNF208Q9H0X6 261 aa14.35□□□□□ -0.11
COL4A5-206ENST00000489230 SH2B1Q9NRF2 756 aaPredicted RBP14.35□□□□□ -0.11
COL4A5-206ENST00000489230 NRBP1Q9UHY1 535 aa14.35□□□□□ -0.11
COL4A5-206ENST00000489230 NR2E3Q9Y5X4 410 aa14.35□□□□□ -0.11
COL4A5-206ENST00000489230 SZT2Q5T011 3432 aa14.34□□□□□ -0.11
COL4A5-206ENST00000489230 GCOM1H8Y6P7 765 aaPredicted RBP14.34□□□□□ -0.11
COL4A5-206ENST00000489230 GJB1P08034 283 aa14.34□□□□□ -0.11
COL4A5-206ENST00000489230 POLR2MP0CAP2 368 aa14.34□□□□□ -0.11
COL4A5-206ENST00000489230 CCL5P13501 91 aa14.34□□□□□ -0.11
COL4A5-206ENST00000489230 STK3Q13188 491 aa14.34□□□□□ -0.11
COL4A5-206ENST00000489230 NTRK3Q16288 839 aa14.34□□□□□ -0.11
COL4A5-206ENST00000489230 MAMDC4Q6UXC1 1216 aa14.34□□□□□ -0.11
COL4A5-206ENST00000489230 FAM133AQ8N9E0 248 aa14.34□□□□□ -0.11
COL4A5-206ENST00000489230 MAML3Q96JK9 1138 aa14.34□□□□□ -0.11
COL4A5-206ENST00000489230 TINF2Q9BSI4 451 aa14.34□□□□□ -0.11
COL4A5-206ENST00000489230 MGAMO43451 1857 aa14.33□□□□□ -0.11
COL4A5-206ENST00000489230 NFIBO00712 420 aa14.33□□□□□ -0.12
COL4A5-206ENST00000489230 PPP1R11O60927 126 aaPredicted RBP14.33□□□□□ -0.12
COL4A5-206ENST00000489230 ELNP15502 786 aa14.33□□□□□ -0.12
COL4A5-206ENST00000489230 CALML3P27482 149 aa14.33□□□□□ -0.12
COL4A5-206ENST00000489230 RPS6P62753 249 aaKnown RBP14.33□□□□□ -0.12
COL4A5-206ENST00000489230 GHRHRQ02643 423 aa14.33□□□□□ -0.12
COL4A5-206ENST00000489230 PFKFB3Q16875 520 aaPredicted RBP14.33□□□□□ -0.12
COL4A5-206ENST00000489230 MCTP2Q6DN12 878 aa14.33□□□□□ -0.12
COL4A5-206ENST00000489230 PPP1R18Q6NYC8 613 aa14.33□□□□□ -0.12
COL4A5-206ENST00000489230 HEATR3Q7Z4Q2 680 aa14.33□□□□□ -0.12
COL4A5-206ENST00000489230 NPLOC4Q8TAT6 608 aa14.33□□□□□ -0.12
COL4A5-206ENST00000489230 NSUN6Q8TEA1 469 aaKnown RBP14.33□□□□□ -0.12
COL4A5-206ENST00000489230 WASF1Q92558 559 aa14.33□□□□□ -0.12
COL4A5-206ENST00000489230 IWS1Q96ST2 819 aa14.33□□□□□ -0.12
COL4A5-206ENST00000489230 SLC26A6Q9BXS9 759 aa14.33□□□□□ -0.12
COL4A5-206ENST00000489230 PSTPIP2Q9H939 334 aa14.33□□□□□ -0.12
COL4A5-206ENST00000489230 NCOA5Q9HCD5 579 aaKnown RBP14.33□□□□□ -0.12
COL4A5-206ENST00000489230 HMX1Q9NP08 348 aaPredicted RBP14.33□□□□□ -0.12
COL4A5-206ENST00000489230 CNPY2Q9Y2B0 182 aa14.33□□□□□ -0.12
COL4A5-206ENST00000489230 SYNGAP1Q96PV0 1343 aa14.33□□□□□ -0.12
COL4A5-206ENST00000489230 PIK3CDO00329 1044 aa14.32□□□□□ -0.12
COL4A5-206ENST00000489230 DEXIO95424 95 aa14.32□□□□□ -0.12
COL4A5-206ENST00000489230 CFBP00751 764 aa14.32□□□□□ -0.12
COL4A5-206ENST00000489230 INHAP05111 366 aa14.32□□□□□ -0.12
COL4A5-206ENST00000489230 SCG2P13521 617 aa14.32□□□□□ -0.12
COL4A5-206ENST00000489230 XBP1P17861 261 aa14.32□□□□□ -0.12
COL4A5-206ENST00000489230 HSD17B4P51659 736 aa14.32□□□□□ -0.12
COL4A5-206ENST00000489230 SCRN1Q12765 414 aa14.32□□□□□ -0.12
COL4A5-206ENST00000489230 ME3Q16798 604 aa14.32□□□□□ -0.12
COL4A5-206ENST00000489230 TRIB2Q92519 343 aa14.32□□□□□ -0.12
COL4A5-206ENST00000489230 GTF3C6Q969F1 213 aa14.32□□□□□ -0.12
COL4A5-206ENST00000489230 LLPHQ9BRT6 129 aaKnown RBP14.32□□□□□ -0.12
COL4A5-206ENST00000489230 SH3GLB2Q9NR46 395 aa14.32□□□□□ -0.12
COL4A5-206ENST00000489230 BARHL2Q9NY43 387 aa14.32□□□□□ -0.12
COL4A5-206ENST00000489230 RPTORQ8N122 1335 aa14.32□□□□□ -0.12
COL4A5-206ENST00000489230 CNTNAP5Q8WYK1 1306 aa14.32□□□□□ -0.12
COL4A5-206ENST00000489230 COL11A1P12107 1806 aaPredicted RBP14.31□□□□□ -0.12
COL4A5-206ENST00000489230 FARP2O94887 1054 aaPredicted RBP14.31□□□□□ -0.12
COL4A5-206ENST00000489230 IGHA2P01877 340 aa14.31□□□□□ -0.12
COL4A5-206ENST00000489230 GNA11P29992 359 aa14.31□□□□□ -0.12
COL4A5-206ENST00000489230 NAPAP54920 295 aa14.31□□□□□ -0.12
COL4A5-206ENST00000489230 CNTN2Q02246 1040 aa14.31□□□□□ -0.12
COL4A5-206ENST00000489230 CCL14Q16627 93 aa14.31□□□□□ -0.12
COL4A5-206ENST00000489230 SMARCC2Q8TAQ2 1214 aa14.31□□□□□ -0.12
COL4A5-206ENST00000489230 BICD2Q8TD16 824 aa14.31□□□□□ -0.12
COL4A5-206ENST00000489230 SYTL5Q8TDW5 730 aaPredicted RBP14.31□□□□□ -0.12
COL4A5-206ENST00000489230 U2AF1L4Q8WU68 220 aaKnown RBP14.31□□□□□ -0.12
COL4A5-206ENST00000489230 PHKBQ93100 1093 aa14.31□□□□□ -0.12
COL4A5-206ENST00000489230 ABHD16BQ9H3Z7 469 aa14.31□□□□□ -0.12
COL4A5-206ENST00000489230 C6orf50Q9HD87 102 aa14.31□□□□□ -0.12
COL4A5-206ENST00000489230 hCG_1642624A0A1W2PR95 340 aa14.3□□□□□ -0.12
COL4A5-206ENST00000489230 SOWAHBA6NEL2 793 aa14.3□□□□□ -0.12
COL4A5-206ENST00000489230 SMCO2A6NFE2 343 aa14.3□□□□□ -0.12
COL4A5-206ENST00000489230 MSCO60682 206 aa14.3□□□□□ -0.12
COL4A5-206ENST00000489230 FOSP01100 380 aaPredicted RBP14.3□□□□□ -0.12
COL4A5-206ENST00000489230 CACNB2Q08289 660 aaPredicted RBP14.3□□□□□ -0.12
COL4A5-206ENST00000489230 MAP3K21Q5TCX8 1036 aa14.3□□□□□ -0.12
COL4A5-206ENST00000489230 ARHGEF16Q5VV41 709 aa14.3□□□□□ -0.12
COL4A5-206ENST00000489230 GALNT17Q6IS24 598 aa14.3□□□□□ -0.12
COL4A5-206ENST00000489230 NOL8Q76FK4 1167 aaKnown RBP14.3□□□□□ -0.12
COL4A5-206ENST00000489230 UBE2Q1Q7Z7E8 422 aa14.3□□□□□ -0.12
COL4A5-206ENST00000489230 CCDC148Q8NFR7 591 aa14.3□□□□□ -0.12
COL4A5-206ENST00000489230 TBC1D5Q92609 795 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms