RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 SLC30A10Q6XR72 485 aa17.51■□□□□ 0.39
FDPS-213ENST00000489003 ZNF467Q7Z7K2 595 aaPredicted RBP17.51■□□□□ 0.39
FDPS-213ENST00000489003 NECAB1Q8N987 351 aa17.51■□□□□ 0.39
FDPS-213ENST00000489003 SYTL5Q8TDW5 730 aaPredicted RBP17.51■□□□□ 0.39
FDPS-213ENST00000489003 PHKBQ93100 1093 aa17.51■□□□□ 0.39
FDPS-213ENST00000489003 LCTP09848 1927 aa17.51■□□□□ 0.39
FDPS-213ENST00000489003 CCDC85CA6NKD9 419 aa17.5■□□□□ 0.39
FDPS-213ENST00000489003 PPFIA3O75145 1194 aa17.5■□□□□ 0.39
FDPS-213ENST00000489003 SNAI1O95863 264 aaPredicted RBP17.5■□□□□ 0.39
FDPS-213ENST00000489003 CFBP00751 764 aa17.5■□□□□ 0.39
FDPS-213ENST00000489003 GHRHRQ02643 423 aa17.5■□□□□ 0.39
FDPS-213ENST00000489003 PKN1Q16512 942 aa17.5■□□□□ 0.39
FDPS-213ENST00000489003 PRAMEF19Q5SWL8 479 aa17.5■□□□□ 0.39
FDPS-213ENST00000489003 TAAR1Q96RJ0 339 aa17.5■□□□□ 0.39
FDPS-213ENST00000489003 SLC26A6Q9BXS9 759 aa17.5■□□□□ 0.39
FDPS-213ENST00000489003 UNC93B1Q9H1C4 597 aa17.5■□□□□ 0.39
FDPS-213ENST00000489003 MAP3K20Q9NYL2 800 aaKnown RBP17.5■□□□□ 0.39
FDPS-213ENST00000489003 COL20A1Q9P218 1284 aa17.5■□□□□ 0.39
FDPS-213ENST00000489003 LIMCH1Q9UPQ0 1083 aa17.5■□□□□ 0.39
FDPS-213ENST00000489003 MCM3APO60318 1980 aa17.49■□□□□ 0.39
FDPS-213ENST00000489003 ASTN1O14525 1302 aa17.49■□□□□ 0.39
FDPS-213ENST00000489003 CPLX1O14810 134 aa17.49■□□□□ 0.39
FDPS-213ENST00000489003 CCL5P13501 91 aa17.49■□□□□ 0.39
FDPS-213ENST00000489003 PRKAR2AP13861 404 aaKnown RBP17.49■□□□□ 0.39
FDPS-213ENST00000489003 HSD17B4P51659 736 aa17.49■□□□□ 0.39
FDPS-213ENST00000489003 PFKFB3Q16875 520 aaPredicted RBP17.49■□□□□ 0.39
FDPS-213ENST00000489003 WWC2Q6AWC2 1192 aa17.49■□□□□ 0.39
FDPS-213ENST00000489003 TYW1BQ6NUM6 668 aa17.49■□□□□ 0.39
FDPS-213ENST00000489003 MSL3Q8N5Y2 521 aaKnown RBP17.49■□□□□ 0.39
FDPS-213ENST00000489003 SAMD3Q8N6K7 520 aa17.49■□□□□ 0.39
FDPS-213ENST00000489003 TRPV1Q8NER1 839 aa17.49■□□□□ 0.39
FDPS-213ENST00000489003 GPKOWQ92917 476 aaPredicted RBP eCLIP17.49■□□□□ 0.393e-6■□□□□ 10.1
FDPS-213ENST00000489003 RNF26Q9BY78 433 aaPredicted RBP17.49■□□□□ 0.39
FDPS-213ENST00000489003 DDX49Q9Y6V7 483 aaKnown RBP17.49■□□□□ 0.39
FDPS-213ENST00000489003 RPTORQ8N122 1335 aa17.48■□□□□ 0.39
FDPS-213ENST00000489003 GCOM1H8Y6P7 765 aaPredicted RBP17.48■□□□□ 0.39
FDPS-213ENST00000489003 DTNBO60941 627 aa17.48■□□□□ 0.39
FDPS-213ENST00000489003 CTDNEP1O95476 244 aa17.48■□□□□ 0.39
FDPS-213ENST00000489003 POLR2MP0CAP2 368 aa17.48■□□□□ 0.39
FDPS-213ENST00000489003 SCG2P13521 617 aa17.48■□□□□ 0.39
FDPS-213ENST00000489003 CCND3P30281 292 aaPredicted RBP17.48■□□□□ 0.39
FDPS-213ENST00000489003 AKAP17AQ02040 695 aaKnown RBP17.48■□□□□ 0.39
FDPS-213ENST00000489003 SSRP1Q08945 709 aaKnown RBP17.48■□□□□ 0.39
FDPS-213ENST00000489003 CPLX2Q6PUV4 134 aaKnown RBP17.48■□□□□ 0.39
FDPS-213ENST00000489003 HEATR3Q7Z4Q2 680 aa17.48■□□□□ 0.39
FDPS-213ENST00000489003 IL27Q8NEV9 243 aa17.48■□□□□ 0.39
FDPS-213ENST00000489003 RNF208Q9H0X6 261 aa17.48■□□□□ 0.39
FDPS-213ENST00000489003 HMX1Q9NP08 348 aaPredicted RBP17.48■□□□□ 0.39
FDPS-213ENST00000489003 ADD3Q9UEY8 706 aaKnown RBP17.48■□□□□ 0.39
FDPS-213ENST00000489003 SYNGAP1Q96PV0 1343 aa17.47■□□□□ 0.39
FDPS-213ENST00000489003 ASB14A6NK59 587 aa17.47■□□□□ 0.39
FDPS-213ENST00000489003 ZNF865P0CJ78 1059 aaPredicted RBP17.47■□□□□ 0.39
FDPS-213ENST00000489003 HOXA13P31271 388 aaPredicted RBP17.47■□□□□ 0.39
FDPS-213ENST00000489003 ALDH5A1P51649 535 aaPredicted RBP17.47■□□□□ 0.39
FDPS-213ENST00000489003 ARMCX2Q7L311 632 aa17.47■□□□□ 0.39
FDPS-213ENST00000489003 GTF3C6Q969F1 213 aa17.47■□□□□ 0.39
FDPS-213ENST00000489003 ZSCAN31Q96LW9 406 aaPredicted RBP17.47■□□□□ 0.39
FDPS-213ENST00000489003 TMEM106CQ9BVX2 250 aa17.47■□□□□ 0.39
FDPS-213ENST00000489003 PSTPIP2Q9H939 334 aa17.47■□□□□ 0.39
FDPS-213ENST00000489003 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.47■□□□□ 0.39
FDPS-213ENST00000489003 BARHL2Q9NY43 387 aa17.47■□□□□ 0.39
FDPS-213ENST00000489003 RBM27Q9P2N5 1060 aaKnown RBP17.47■□□□□ 0.39
FDPS-213ENST00000489003 HTTP42858 3142 aa17.47■□□□□ 0.39
FDPS-213ENST00000489003 STXBP3O00186 592 aa17.46■□□□□ 0.39
FDPS-213ENST00000489003 MEIS2O14770 477 aa17.46■□□□□ 0.39
FDPS-213ENST00000489003 CYBAP13498 195 aa17.46■□□□□ 0.39
FDPS-213ENST00000489003 ST3GAL1Q11201 340 aa17.46■□□□□ 0.39
FDPS-213ENST00000489003 USP17L6PQ6QN14 398 aa17.46■□□□□ 0.39
FDPS-213ENST00000489003 TRIM22Q8IYM9 498 aa17.46■□□□□ 0.39
FDPS-213ENST00000489003 DNERQ8NFT8 737 aa17.46■□□□□ 0.39
FDPS-213ENST00000489003 MORC4Q8TE76 937 aa17.46■□□□□ 0.39
FDPS-213ENST00000489003 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.46■□□□□ 0.392e-6■■■■□ 24.8
FDPS-213ENST00000489003 PAK6Q9NQU5 681 aaPredicted RBP17.46■□□□□ 0.39
FDPS-213ENST00000489003 NRBP1Q9UHY1 535 aa17.46■□□□□ 0.39
FDPS-213ENST00000489003 LOC102724159A0A0B4J2E5 919 aa17.45■□□□□ 0.38
FDPS-213ENST00000489003 SMCO2A6NFE2 343 aa17.45■□□□□ 0.38
FDPS-213ENST00000489003 hCG_1984214I3L0E3 225 aa17.45■□□□□ 0.38
FDPS-213ENST00000489003 PIK3CDO00329 1044 aa17.45■□□□□ 0.38
FDPS-213ENST00000489003 ST18O60284 1047 aa17.45■□□□□ 0.38
FDPS-213ENST00000489003 DEXIO95424 95 aa17.45■□□□□ 0.38
FDPS-213ENST00000489003 GJB1P08034 283 aa17.45■□□□□ 0.38
FDPS-213ENST00000489003 NAPAP54920 295 aa17.45■□□□□ 0.38
FDPS-213ENST00000489003 ACVR2BQ13705 512 aa17.45■□□□□ 0.38
FDPS-213ENST00000489003 PWP2Q15269 919 aaKnown RBP17.45■□□□□ 0.38
FDPS-213ENST00000489003 FCHSD1Q86WN1 690 aa17.45■□□□□ 0.38
FDPS-213ENST00000489003 ZNF713Q8N859 430 aaPredicted RBP17.45■□□□□ 0.38
FDPS-213ENST00000489003 NSUN6Q8TEA1 469 aaKnown RBP17.45■□□□□ 0.38
FDPS-213ENST00000489003 DEFB118Q96PH6 123 aa17.45■□□□□ 0.38
FDPS-213ENST00000489003 RMDN3Q96TC7 470 aa17.45■□□□□ 0.38
FDPS-213ENST00000489003 KATNBL1Q9H079 304 aa17.45■□□□□ 0.38
FDPS-213ENST00000489003 ABHD16BQ9H3Z7 469 aa17.45■□□□□ 0.38
FDPS-213ENST00000489003 RBBP6Q7Z6E9 1792 aaKnown RBP17.45■□□□□ 0.38
FDPS-213ENST00000489003 KIAA0100Q14667 2235 aaKnown RBP17.44■□□□□ 0.38
FDPS-213ENST00000489003 CDKL5O76039 1030 aa17.44■□□□□ 0.38
FDPS-213ENST00000489003 CD2BP2O95400 341 aaKnown RBP17.44■□□□□ 0.38
FDPS-213ENST00000489003 SGPL1O95470 568 aa17.44■□□□□ 0.38
FDPS-213ENST00000489003 CNGA1P29973 690 aa17.44■□□□□ 0.38
FDPS-213ENST00000489003 MRPL12P52815 198 aaKnown RBP17.44■□□□□ 0.38
FDPS-213ENST00000489003 LHX8Q68G74 356 aa17.44■□□□□ 0.38
FDPS-213ENST00000489003 SMARCC2Q8TAQ2 1214 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms