RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 CXXC1Q9P0U4 656 aaPredicted RBP18.72■□□□□ 0.59
ERGIC3-217ENST00000488935 MROH7Q68CQ1 1323 aa18.72■□□□□ 0.59
ERGIC3-217ENST00000488935 TLR3O15455 904 aaKnown RBP18.71■□□□□ 0.59
ERGIC3-217ENST00000488935 B4GALT4O60513 344 aa18.71■□□□□ 0.59
ERGIC3-217ENST00000488935 PPIGQ13427 754 aaKnown RBP eCLIP18.71■□□□□ 0.593e-11■■□□□ 13.8
ERGIC3-217ENST00000488935 USH1GQ495M9 461 aa18.71■□□□□ 0.59
ERGIC3-217ENST00000488935 AKNAD1Q5T1N1 836 aa18.71■□□□□ 0.59
ERGIC3-217ENST00000488935 IQSEC1Q6DN90 963 aa18.71■□□□□ 0.59
ERGIC3-217ENST00000488935 CWC27Q6UX04 472 aaKnown RBP18.71■□□□□ 0.59
ERGIC3-217ENST00000488935 MFSD6Q6ZSS7 791 aa18.71■□□□□ 0.59
ERGIC3-217ENST00000488935 USP38Q8NB14 1042 aa18.71■□□□□ 0.59
ERGIC3-217ENST00000488935 TBC1D5Q92609 795 aa18.71■□□□□ 0.59
ERGIC3-217ENST00000488935 GBF1Q92538 1859 aa18.71■□□□□ 0.59
ERGIC3-217ENST00000488935 MYL3P08590 195 aa18.7■□□□□ 0.58
ERGIC3-217ENST00000488935 NKX3-2P78367 333 aa18.7■□□□□ 0.58
ERGIC3-217ENST00000488935 ZNF543Q08ER8 600 aa18.7■□□□□ 0.58
ERGIC3-217ENST00000488935 OTOP2Q7RTS6 562 aa18.7■□□□□ 0.58
ERGIC3-217ENST00000488935 TMEM199Q8N511 208 aa18.7■□□□□ 0.58
ERGIC3-217ENST00000488935 SLC43A3Q8NBI5 491 aa18.7■□□□□ 0.58
ERGIC3-217ENST00000488935 PPM1EQ8WY54 764 aa18.7■□□□□ 0.58
ERGIC3-217ENST00000488935 TIFAQ96CG3 184 aa18.7■□□□□ 0.58
ERGIC3-217ENST00000488935 SCLYQ96I15 445 aa18.7■□□□□ 0.58
ERGIC3-217ENST00000488935 PBX4Q9BYU1 374 aa18.7■□□□□ 0.58
ERGIC3-217ENST00000488935 WDR11Q9BZH6 1224 aa18.7■□□□□ 0.58
ERGIC3-217ENST00000488935 HIPK3Q9H422 1215 aa18.7■□□□□ 0.58
ERGIC3-217ENST00000488935 ZNF576Q9H609 170 aa18.7■□□□□ 0.58
ERGIC3-217ENST00000488935 PRDM6Q9NQX0 595 aa18.7■□□□□ 0.58
ERGIC3-217ENST00000488935 TCP11L1Q9NUJ3 509 aa18.7■□□□□ 0.58
ERGIC3-217ENST00000488935 RNF207Q6ZRF8 634 aa18.69■□□□□ 0.58
ERGIC3-217ENST00000488935 VTA1Q9NP79 307 aa18.69■□□□□ 0.58
ERGIC3-217ENST00000488935 TRMT13Q9NUP7 481 aaKnown RBP18.69■□□□□ 0.58
ERGIC3-217ENST00000488935 SCN5AQ14524 2016 aa18.69■□□□□ 0.58
ERGIC3-217ENST00000488935 CYP2C9P11712 490 aa18.68■□□□□ 0.58
ERGIC3-217ENST00000488935 CHMP4BP1P59074 171 aa18.68■□□□□ 0.58
ERGIC3-217ENST00000488935 RPS6P62753 249 aaKnown RBP18.68■□□□□ 0.58
ERGIC3-217ENST00000488935 CHD1LQ86WJ1 897 aa18.68■□□□□ 0.58
ERGIC3-217ENST00000488935 SMC5Q8IY18 1101 aa18.68■□□□□ 0.58
ERGIC3-217ENST00000488935 MORC4Q8TE76 937 aa18.68■□□□□ 0.58
ERGIC3-217ENST00000488935 WNT8AQ9H1J5 351 aa18.68■□□□□ 0.58
ERGIC3-217ENST00000488935 PRDM12Q9H4Q4 367 aa18.68■□□□□ 0.58
ERGIC3-217ENST00000488935 IL23AQ9NPF7 189 aa18.68■□□□□ 0.58
ERGIC3-217ENST00000488935 B4E1Z4 1266 aa18.67■□□□□ 0.58
ERGIC3-217ENST00000488935 ZEB2O60315 1214 aa18.67■□□□□ 0.58
ERGIC3-217ENST00000488935 KDM4AO75164 1064 aa18.67■□□□□ 0.58
ERGIC3-217ENST00000488935 RABGGTBP53611 331 aa18.67■□□□□ 0.58
ERGIC3-217ENST00000488935 DUSP28Q4G0W2 176 aa18.67■□□□□ 0.58
ERGIC3-217ENST00000488935 RASIP1Q5U651 963 aa18.67■□□□□ 0.58
ERGIC3-217ENST00000488935 OR6J1Q8NGC5 347 aa18.67■□□□□ 0.58
ERGIC3-217ENST00000488935 NOC4LQ9BVI4 516 aaKnown RBP18.67■□□□□ 0.58
ERGIC3-217ENST00000488935 IL25Q9H293 177 aa18.67■□□□□ 0.58
ERGIC3-217ENST00000488935 RWDD1Q9H446 243 aaPredicted RBP18.67■□□□□ 0.58
ERGIC3-217ENST00000488935 ZNF213O14771 459 aa18.66■□□□□ 0.58
ERGIC3-217ENST00000488935 CABYRO75952 493 aa18.66■□□□□ 0.58
ERGIC3-217ENST00000488935 MYOGP15173 224 aa18.66■□□□□ 0.58
ERGIC3-217ENST00000488935 PDE4DQ08499 809 aa18.66■□□□□ 0.58
ERGIC3-217ENST00000488935 VWCEQ96DN2 955 aa18.66■□□□□ 0.58
ERGIC3-217ENST00000488935 NKX2-4Q9H2Z4 354 aa18.66■□□□□ 0.58
ERGIC3-217ENST00000488935 VAT1LQ9HCJ6 419 aa18.66■□□□□ 0.58
ERGIC3-217ENST00000488935 ADD3Q9UEY8 706 aaKnown RBP18.66■□□□□ 0.58
ERGIC3-217ENST00000488935 YBX2Q9Y2T7 364 aaKnown RBP18.66■□□□□ 0.58
ERGIC3-217ENST00000488935 MYH6P13533 1939 aa18.65■□□□□ 0.58
ERGIC3-217ENST00000488935 ARIH2O95376 493 aa18.65■□□□□ 0.58
ERGIC3-217ENST00000488935 FGBP02675 491 aa18.65■□□□□ 0.58
ERGIC3-217ENST00000488935 SNHG28P0DPA3 235 aa18.65■□□□□ 0.58
ERGIC3-217ENST00000488935 NUCB1Q02818 461 aa18.65■□□□□ 0.58
ERGIC3-217ENST00000488935 FAM47CQ5HY64 1035 aa18.65■□□□□ 0.58
ERGIC3-217ENST00000488935 DEFB128Q7Z7B8 93 aa18.65■□□□□ 0.58
ERGIC3-217ENST00000488935 ESR2Q92731 530 aa18.65■□□□□ 0.58
ERGIC3-217ENST00000488935 ALDH8A1Q9H2A2 487 aaPredicted RBP18.65■□□□□ 0.58
ERGIC3-217ENST00000488935 DIAPH3Q9NSV4 1193 aa18.65■□□□□ 0.58
ERGIC3-217ENST00000488935 ZMYM6O95789 1325 aa18.65■□□□□ 0.58
ERGIC3-217ENST00000488935 PURAQ00577 322 aaKnown RBP18.64■□□□□ 0.57
ERGIC3-217ENST00000488935 CCDC85BQ15834 202 aaPredicted RBP18.64■□□□□ 0.57
ERGIC3-217ENST00000488935 NBPF20Q3BBV1 942 aa18.64■□□□□ 0.57
ERGIC3-217ENST00000488935 PSRC1Q6PGN9 363 aaPredicted RBP18.64■□□□□ 0.57
ERGIC3-217ENST00000488935 PNMA1Q8ND90 353 aa18.64■□□□□ 0.57
ERGIC3-217ENST00000488935 HERVK_113Q902F9 699 aa18.64■□□□□ 0.57
ERGIC3-217ENST00000488935 TTC14Q96N46 770 aa18.64■□□□□ 0.57
ERGIC3-217ENST00000488935 TAAR1Q96RJ0 339 aa18.64■□□□□ 0.57
ERGIC3-217ENST00000488935 COL20A1Q9P218 1284 aa18.64■□□□□ 0.57
ERGIC3-217ENST00000488935 Q9Y3F1 56 aa18.64■□□□□ 0.57
ERGIC3-217ENST00000488935 SPTBN5Q9NRC6 3674 aaKnown RBP18.64■□□□□ 0.57
ERGIC3-217ENST00000488935 LAMA4Q16363 1823 aa18.63■□□□□ 0.57
ERGIC3-217ENST00000488935 TRIP12Q14669 1992 aaPredicted RBP18.63■□□□□ 0.57
ERGIC3-217ENST00000488935 RBM47A0AV96 593 aaKnown RBP18.63■□□□□ 0.57
ERGIC3-217ENST00000488935 ZBBXA8MT70 800 aa18.63■□□□□ 0.57
ERGIC3-217ENST00000488935 ADGRE1Q14246 886 aa18.63■□□□□ 0.57
ERGIC3-217ENST00000488935 CDC37Q16543 378 aaPredicted RBP18.63■□□□□ 0.57
ERGIC3-217ENST00000488935 ADGRF4Q8IZF3 695 aa18.63■□□□□ 0.57
ERGIC3-217ENST00000488935 RNF41Q9H4P4 317 aaPredicted RBP18.63■□□□□ 0.57
ERGIC3-217ENST00000488935 ZSWIM5Q9P217 1185 aa18.63■□□□□ 0.57
ERGIC3-217ENST00000488935 TMEM265A0A087WTH1 108 aa18.62■□□□□ 0.57
ERGIC3-217ENST00000488935 TXNP10599 105 aaKnown RBP18.62■□□□□ 0.57
ERGIC3-217ENST00000488935 TTLL4Q14679 1199 aa18.62■□□□□ 0.57
ERGIC3-217ENST00000488935 PPP2R5BQ15173 497 aa18.62■□□□□ 0.57
ERGIC3-217ENST00000488935 SEPT14Q6ZU15 432 aa18.62■□□□□ 0.57
ERGIC3-217ENST00000488935 CHST3Q7LGC8 479 aa18.62■□□□□ 0.57
ERGIC3-217ENST00000488935 ENAHQ8N8S7 591 aaPredicted RBP18.62■□□□□ 0.57
ERGIC3-217ENST00000488935 KAT14Q9H8E8 782 aa18.62■□□□□ 0.57
ERGIC3-217ENST00000488935 TNKSO95271 1327 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms