RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 SCN9AQ15858 1988 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 MYH13Q9UKX3 1938 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 TRPM7Q96QT4 1865 aa6.36□□□□□ -1.39
SF3A3-207ENST00000488934 A0A096LPE4 126 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 SCO2A0A1W2PP80 73 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 A0A1W2PPZ6 126 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 EIF1AYO14602 144 aaKnown RBP6.35□□□□□ -1.39
SF3A3-207ENST00000488934 GADD45BO75293 160 aaPredicted RBP6.35□□□□□ -1.39
SF3A3-207ENST00000488934 RAD17O75943 681 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 WISP1O95388 367 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 MAPK1P28482 360 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 CXCL9Q07325 125 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 ORC1Q13415 861 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 INTS3Q68E01 1043 aaKnown RBP6.35□□□□□ -1.39
SF3A3-207ENST00000488934 KIAA1211Q6ZU35 1233 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 C15orf52Q6ZUT6 534 aaKnown RBP6.35□□□□□ -1.39
SF3A3-207ENST00000488934 ZNF804AQ7Z570 1209 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 VN1R5Q7Z5H4 357 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 AGBL3Q8NEM8 1001 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 UBASH3BQ8TF42 649 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 UTP4Q969X6 686 aaKnown RBP6.35□□□□□ -1.39
SF3A3-207ENST00000488934 SUCLG2Q96I99 432 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 USP26Q9BXU7 913 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 NIF3L1Q9GZT8 377 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 USP44Q9H0E7 712 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 PPP4R2Q9NY27 417 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 RAXQ9Y2V3 346 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 ARAP2Q8WZ64 1704 aa6.35□□□□□ -1.39
SF3A3-207ENST00000488934 YDJCA8MPS7 323 aa6.34□□□□□ -1.39
SF3A3-207ENST00000488934 PSMD14O00487 310 aa6.34□□□□□ -1.39
SF3A3-207ENST00000488934 SOX1O00570 391 aaPredicted RBP6.34□□□□□ -1.39
SF3A3-207ENST00000488934 GPR182O15218 404 aa6.34□□□□□ -1.39
SF3A3-207ENST00000488934 DDX3YO15523 660 aaKnown RBP6.34□□□□□ -1.39
SF3A3-207ENST00000488934 GAS2O43903 313 aaKnown RBP6.34□□□□□ -1.39
SF3A3-207ENST00000488934 ADAM11O75078 769 aa6.34□□□□□ -1.39
SF3A3-207ENST00000488934 VIL1P09327 827 aaKnown RBP6.34□□□□□ -1.39
SF3A3-207ENST00000488934 ESRRAP11474 423 aaPredicted RBP6.34□□□□□ -1.39
SF3A3-207ENST00000488934 TRIM27P14373 513 aa6.34□□□□□ -1.39
SF3A3-207ENST00000488934 GMPSP49915 693 aaPredicted RBP6.34□□□□□ -1.39
SF3A3-207ENST00000488934 PCDH1Q08174 1060 aa6.34□□□□□ -1.39
SF3A3-207ENST00000488934 UBE4AQ14139 1066 aa6.34□□□□□ -1.39
SF3A3-207ENST00000488934 STRIP1Q5VSL9 837 aa6.34□□□□□ -1.39
SF3A3-207ENST00000488934 ZSCAN29Q8IWY8 852 aaPredicted RBP6.34□□□□□ -1.39
SF3A3-207ENST00000488934 CCDC74AQ96AQ1 378 aa6.34□□□□□ -1.39
SF3A3-207ENST00000488934 CSRNP1Q96S65 589 aa6.34□□□□□ -1.39
SF3A3-207ENST00000488934 CHMP4BQ9H444 224 aaKnown RBP6.34□□□□□ -1.39
SF3A3-207ENST00000488934 CYP4F12Q9HCS2 524 aa6.34□□□□□ -1.39
SF3A3-207ENST00000488934 NPHS2Q9NP85 383 aa6.34□□□□□ -1.39
SF3A3-207ENST00000488934 CNOT7Q9UIV1 285 aaKnown RBP6.34□□□□□ -1.39
SF3A3-207ENST00000488934 HIF3AQ9Y2N7 669 aa6.34□□□□□ -1.39
SF3A3-207ENST00000488934 ECM29Q5VYK3 1845 aa6.34□□□□□ -1.4
SF3A3-207ENST00000488934 LOC100996750A0A140TA64 210 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 MEGF11A6BM72 1044 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 BCAR3O75815 825 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 CIAO1O76071 339 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 CYP11A1P05108 521 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 EPS15P42566 896 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 GSTM4Q03013 218 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 PTPN12Q05209 780 aaKnown RBP6.33□□□□□ -1.4
SF3A3-207ENST00000488934 CAVIN4Q5BKX8 364 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 METTL24Q5JXM2 366 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 EPHA10Q5JZY3 1008 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 VPS37DQ86XT2 251 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 ANKRD44Q8N8A2 993 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.33□□□□□ -1.4
SF3A3-207ENST00000488934 KAZALD1Q96I82 304 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 TCF12Q99081 682 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 KRTAP4-6Q9BYQ5 205 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 STOML1Q9UBI4 398 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 HDAC9Q9UKV0 1011 aa6.33□□□□□ -1.4
SF3A3-207ENST00000488934 ZNF646O15015 1829 aaPredicted RBP6.33□□□□□ -1.4
SF3A3-207ENST00000488934 TM4SF5O14894 197 aa6.32□□□□□ -1.4
SF3A3-207ENST00000488934 PLIN1O60240 522 aa6.32□□□□□ -1.4
SF3A3-207ENST00000488934 PDE8BO95263 885 aa6.32□□□□□ -1.4
SF3A3-207ENST00000488934 GNAI2P04899 355 aa6.32□□□□□ -1.4
SF3A3-207ENST00000488934 IFIT1P09914 478 aaKnown RBP6.32□□□□□ -1.4
SF3A3-207ENST00000488934 FSTP19883 344 aa6.32□□□□□ -1.4
SF3A3-207ENST00000488934 FKBP1AP62942 108 aaKnown RBP6.32□□□□□ -1.4
SF3A3-207ENST00000488934 PUM3Q15397 648 aaKnown RBP6.32□□□□□ -1.4
SF3A3-207ENST00000488934 KIF4BQ2VIQ3 1234 aa6.32□□□□□ -1.4
SF3A3-207ENST00000488934 CDC37L1Q7L3B6 337 aa6.32□□□□□ -1.4
SF3A3-207ENST00000488934 ITPRIPQ8IWB1 547 aa6.32□□□□□ -1.4
SF3A3-207ENST00000488934 CNTROBQ8N137 903 aa6.32□□□□□ -1.4
SF3A3-207ENST00000488934 FAM46AQ96IP4 442 aaKnown RBP6.32□□□□□ -1.4
SF3A3-207ENST00000488934 MYRFLQ96LU7 910 aa6.32□□□□□ -1.4
SF3A3-207ENST00000488934 GPR101Q96P66 508 aaPredicted RBP6.32□□□□□ -1.4
SF3A3-207ENST00000488934 UBL7Q96S82 380 aaPredicted RBP6.32□□□□□ -1.4
SF3A3-207ENST00000488934 TRAIPQ9BWF2 469 aa6.32□□□□□ -1.4
SF3A3-207ENST00000488934 IVNS1ABPQ9Y6Y0 642 aa6.32□□□□□ -1.4
SF3A3-207ENST00000488934 POLR2AP24928 1970 aaKnown RBP6.31□□□□□ -1.4
SF3A3-207ENST00000488934 PASKQ96RG2 1323 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 PITPNM2Q9BZ72 1349 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 METTL12A8MUP2 240 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 EYA2O00167 538 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 SRGAP3O43295 1099 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 FRAT2O75474 233 aaPredicted RBP6.31□□□□□ -1.4
SF3A3-207ENST00000488934 TAF5LO75529 589 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 SLC5A1P13866 664 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 IL1R1P14778 569 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 ITGB7P26010 798 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms