RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 CPVLQ9H3G5 476 aa16.1■□□□□ 0.17
SPTLC1-207ENST00000488921 Q9Y3F1 56 aa16.1■□□□□ 0.17
SPTLC1-207ENST00000488921 RBM8AQ9Y5S9 174 aaKnown RBP16.1■□□□□ 0.17
SPTLC1-207ENST00000488921 SZT2Q5T011 3432 aa16.1■□□□□ 0.17
SPTLC1-207ENST00000488921 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.09■□□□□ 0.17
SPTLC1-207ENST00000488921 DCDC2CA8MYV0 355 aa16.09■□□□□ 0.17
SPTLC1-207ENST00000488921 ZEB2O60315 1214 aa16.09■□□□□ 0.17
SPTLC1-207ENST00000488921 PQBP1O60828 265 aaKnown RBP16.09■□□□□ 0.17
SPTLC1-207ENST00000488921 PDE4DQ08499 809 aa16.09■□□□□ 0.17
SPTLC1-207ENST00000488921 WTAPQ15007 396 aa16.09■□□□□ 0.17
SPTLC1-207ENST00000488921 QRICH1Q2TAL8 776 aa16.09■□□□□ 0.17
SPTLC1-207ENST00000488921 LRIT3Q3SXY7 679 aa16.09■□□□□ 0.17
SPTLC1-207ENST00000488921 BMP2KLQ5H9B9 411 aa16.09■□□□□ 0.17
SPTLC1-207ENST00000488921 EEPD1Q7L9B9 569 aa16.09■□□□□ 0.17
SPTLC1-207ENST00000488921 ANKRD33Q7Z3H0 272 aa16.09■□□□□ 0.17
SPTLC1-207ENST00000488921 FBXO11Q86XK2 927 aa16.09■□□□□ 0.17
SPTLC1-207ENST00000488921 MCF2L2Q86YR7 1114 aa16.09■□□□□ 0.17
SPTLC1-207ENST00000488921 TOX2Q96NM4 488 aa16.09■□□□□ 0.17
SPTLC1-207ENST00000488921 GNEQ9Y223 722 aaKnown RBP16.09■□□□□ 0.17
SPTLC1-207ENST00000488921 MRPL11Q9Y3B7 192 aaKnown RBP16.09■□□□□ 0.17
SPTLC1-207ENST00000488921 A0A0U1RQG5 324 aaPredicted RBP16.08■□□□□ 0.16
SPTLC1-207ENST00000488921 CABYRO75952 493 aa16.08■□□□□ 0.16
SPTLC1-207ENST00000488921 TRAF1Q13077 416 aa16.08■□□□□ 0.16
SPTLC1-207ENST00000488921 FSCN1Q16658 493 aaKnown RBP16.08■□□□□ 0.16
SPTLC1-207ENST00000488921 TAPT1Q6NXT6 567 aa16.08■□□□□ 0.16
SPTLC1-207ENST00000488921 VTI1AQ96AJ9 217 aa16.08■□□□□ 0.16
SPTLC1-207ENST00000488921 PURBQ96QR8 312 aaKnown RBP16.08■□□□□ 0.16
SPTLC1-207ENST00000488921 JMJD4Q9H9V9 463 aa16.08■□□□□ 0.16
SPTLC1-207ENST00000488921 KLRF2D3W0D1 207 aa16.07■□□□□ 0.16
SPTLC1-207ENST00000488921 SMPD1P17405 629 aa16.07■□□□□ 0.16
SPTLC1-207ENST00000488921 EDNRBP24530 442 aa16.07■□□□□ 0.16
SPTLC1-207ENST00000488921 DUSP28Q4G0W2 176 aa16.07■□□□□ 0.16
SPTLC1-207ENST00000488921 TMEM67Q5HYA8 995 aa16.07■□□□□ 0.16
SPTLC1-207ENST00000488921 GPR153Q6NV75 609 aa16.07■□□□□ 0.16
SPTLC1-207ENST00000488921 STAG2Q8N3U4 1231 aa16.07■□□□□ 0.16
SPTLC1-207ENST00000488921 ESYT1Q9BSJ8 1104 aa16.07■□□□□ 0.16
SPTLC1-207ENST00000488921 MTA3Q9BTC8 594 aa16.07■□□□□ 0.16
SPTLC1-207ENST00000488921 AMNQ9BXJ7 453 aa16.07■□□□□ 0.16
SPTLC1-207ENST00000488921 SEZ6LQ9BYH1 1024 aa16.07■□□□□ 0.16
SPTLC1-207ENST00000488921 VAT1LQ9HCJ6 419 aa16.07■□□□□ 0.16
SPTLC1-207ENST00000488921 PDGFCQ9NRA1 345 aa16.07■□□□□ 0.16
SPTLC1-207ENST00000488921 MAD2L2Q9UI95 211 aa16.07■□□□□ 0.16
SPTLC1-207ENST00000488921 PALM3A6NDB9 673 aaPredicted RBP16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 SOX1O00570 391 aaPredicted RBP16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 KIAA0355O15063 1070 aa16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 NKRFO15226 690 aaKnown RBP eCLIP16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 CTAGE5O15320 804 aa16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 TLR3O15455 904 aaKnown RBP16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 DYNC1LI2O43237 492 aaPredicted RBP16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 RAG1P15918 1043 aa16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 BEX3Q00994 111 aa16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 GRM4Q14833 912 aa16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 CASC1Q6TDU7 716 aa16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 STOX1Q6ZVD7 989 aa16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 CATIPQ7Z7H3 387 aa16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 MB21D2Q8IYB1 491 aaPredicted RBP16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 SCFD2Q8WU76 684 aa16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 BADQ92934 168 aa16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 WDR11Q9BZH6 1224 aa16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 LSG1Q9H089 658 aaKnown RBP16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 TMEM39AQ9NV64 488 aa16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 DDX49Q9Y6V7 483 aaKnown RBP16.06■□□□□ 0.16
SPTLC1-207ENST00000488921 RBM47A0AV96 593 aaKnown RBP16.05■□□□□ 0.16
SPTLC1-207ENST00000488921 TRIM43BA6NCK2 446 aa16.05■□□□□ 0.16
SPTLC1-207ENST00000488921 ARVCFO00192 962 aa16.05■□□□□ 0.16
SPTLC1-207ENST00000488921 ZBTB5O15062 677 aa16.05■□□□□ 0.16
SPTLC1-207ENST00000488921 CPT1AP50416 773 aa16.05■□□□□ 0.16
SPTLC1-207ENST00000488921 IRX5P78411 483 aaPredicted RBP16.05■□□□□ 0.16
SPTLC1-207ENST00000488921 FAAP100Q0VG06 881 aa16.05■□□□□ 0.16
SPTLC1-207ENST00000488921 PPP2R5BQ15173 497 aa16.05■□□□□ 0.16
SPTLC1-207ENST00000488921 BRDTQ58F21 947 aaPredicted RBP16.05■□□□□ 0.16
SPTLC1-207ENST00000488921 SH3RF1Q7Z6J0 888 aa16.05■□□□□ 0.16
SPTLC1-207ENST00000488921 NSUN6Q8TEA1 469 aaKnown RBP16.05■□□□□ 0.16
SPTLC1-207ENST00000488921 TRIM43Q96BQ3 446 aaPredicted RBP16.05■□□□□ 0.16
SPTLC1-207ENST00000488921 MTMR8Q96EF0 704 aa16.05■□□□□ 0.16
SPTLC1-207ENST00000488921 LRCH3Q96II8 777 aa16.05■□□□□ 0.16
SPTLC1-207ENST00000488921 ANO2Q9NQ90 1003 aa16.05■□□□□ 0.16
SPTLC1-207ENST00000488921 TAF6LQ9Y6J9 622 aa16.05■□□□□ 0.16
SPTLC1-207ENST00000488921 MCM5P33992 734 aa16.04■□□□□ 0.16
SPTLC1-207ENST00000488921 CDK7P50613 346 aa16.04■□□□□ 0.16
SPTLC1-207ENST00000488921 TROAPQ12815 778 aa16.04■□□□□ 0.16
SPTLC1-207ENST00000488921 RNF20Q5VTR2 975 aa16.04■□□□□ 0.16
SPTLC1-207ENST00000488921 CHST3Q7LGC8 479 aa16.04■□□□□ 0.16
SPTLC1-207ENST00000488921 SAMD3Q8N6K7 520 aa16.04■□□□□ 0.16
SPTLC1-207ENST00000488921 SYTL5Q8TDW5 730 aaPredicted RBP16.04■□□□□ 0.16
SPTLC1-207ENST00000488921 IWS1Q96ST2 819 aa16.04■□□□□ 0.16
SPTLC1-207ENST00000488921 MAP3K14Q99558 947 aa16.04■□□□□ 0.16
SPTLC1-207ENST00000488921 POLR3EQ9NVU0 708 aa16.04■□□□□ 0.16
SPTLC1-207ENST00000488921 MAP3K20Q9NYL2 800 aaKnown RBP16.04■□□□□ 0.16
SPTLC1-207ENST00000488921 SLC27A2O14975 620 aa16.03■□□□□ 0.16
SPTLC1-207ENST00000488921 DDAH1O94760 285 aa16.03■□□□□ 0.16
SPTLC1-207ENST00000488921 CFBP00751 764 aa16.03■□□□□ 0.16
SPTLC1-207ENST00000488921 KIF5BP33176 963 aa16.03■□□□□ 0.16
SPTLC1-207ENST00000488921 ANTXR2P58335 489 aa16.03■□□□□ 0.16
SPTLC1-207ENST00000488921 TTLL4Q14679 1199 aa16.03■□□□□ 0.16
SPTLC1-207ENST00000488921 CXCL17Q6UXB2 119 aa16.03■□□□□ 0.16
SPTLC1-207ENST00000488921 HOMER1Q86YM7 354 aa16.03■□□□□ 0.16
SPTLC1-207ENST00000488921 TMTC2Q8N394 836 aa16.03■□□□□ 0.16
SPTLC1-207ENST00000488921 OR6J1Q8NGC5 347 aa16.03■□□□□ 0.16
SPTLC1-207ENST00000488921 IGDCC4Q8TDY8 1250 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms