RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 DHX16O60231 1041 aaKnown RBP13.95□□□□□ -0.18
CCHCR1-215ENST00000488920 CYP21A2P08686 494 aa13.95□□□□□ -0.18
CCHCR1-215ENST00000488920 CDK7P50613 346 aa13.95□□□□□ -0.18
CCHCR1-215ENST00000488920 TRDNQ13061 729 aa13.95□□□□□ -0.18
CCHCR1-215ENST00000488920 FSCN1Q16658 493 aaKnown RBP13.95□□□□□ -0.18
CCHCR1-215ENST00000488920 ASPRV1Q53RT3 343 aa13.95□□□□□ -0.18
CCHCR1-215ENST00000488920 GPR153Q6NV75 609 aa13.95□□□□□ -0.18
CCHCR1-215ENST00000488920 CXCL17Q6UXB2 119 aa13.95□□□□□ -0.18
CCHCR1-215ENST00000488920 TBC1D5Q92609 795 aa13.95□□□□□ -0.18
CCHCR1-215ENST00000488920 TAF6LQ9Y6J9 622 aa13.95□□□□□ -0.18
CCHCR1-215ENST00000488920 U3KPZ7 1027 aaPredicted RBP13.95□□□□□ -0.18
CCHCR1-215ENST00000488920 A0A0U1RQG5 324 aaPredicted RBP13.94□□□□□ -0.18
CCHCR1-215ENST00000488920 ARVCFO00192 962 aa13.94□□□□□ -0.18
CCHCR1-215ENST00000488920 SGSM2O43147 1006 aa13.94□□□□□ -0.18
CCHCR1-215ENST00000488920 EPHB4P54760 987 aa13.94□□□□□ -0.18
CCHCR1-215ENST00000488920 PDE4DQ08499 809 aa13.94□□□□□ -0.18
CCHCR1-215ENST00000488920 SEC23AQ15436 765 aa13.94□□□□□ -0.18
CCHCR1-215ENST00000488920 STAG2Q8N3U4 1231 aa13.94□□□□□ -0.18
CCHCR1-215ENST00000488920 RGS22Q8NE09 1264 aa13.94□□□□□ -0.18
CCHCR1-215ENST00000488920 WDR11Q9BZH6 1224 aa13.94□□□□□ -0.18
CCHCR1-215ENST00000488920 JMJD4Q9H9V9 463 aa13.94□□□□□ -0.18
CCHCR1-215ENST00000488920 Q9Y3F1 56 aa13.94□□□□□ -0.18
CCHCR1-215ENST00000488920 ZEB2O60315 1214 aa13.93□□□□□ -0.18
CCHCR1-215ENST00000488920 QRICH1Q2TAL8 776 aa13.93□□□□□ -0.18
CCHCR1-215ENST00000488920 DUSP28Q4G0W2 176 aa13.93□□□□□ -0.18
CCHCR1-215ENST00000488920 CHST3Q7LGC8 479 aa13.93□□□□□ -0.18
CCHCR1-215ENST00000488920 ABCB11O95342 1321 aa13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 MROH7Q68CQ1 1323 aa13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 LOC102724159A0A0B4J2E5 919 aa13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 RBM47A0AV96 593 aaKnown RBP13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 KLRF2D3W0D1 207 aa13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 E7EWF7 191 aa13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 IFIT3O14879 490 aaKnown RBP13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 TIMP1P01033 207 aa13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 PSMC6P62333 389 aa13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 FPGSQ05932 587 aa13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 PWP2Q15269 919 aaKnown RBP13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 FBXO11Q86XK2 927 aa13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 DNERQ8NFT8 737 aa13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 MAP4K1Q92918 833 aa13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 MPHOSPH6Q99547 160 aaKnown RBP13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 SENP2Q9HC62 589 aa13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 TBX21Q9UL17 535 aa13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 MCM3APO60318 1980 aa13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 LAMA2P24043 3122 aaKnown RBP13.92□□□□□ -0.18
CCHCR1-215ENST00000488920 GRIN2DO15399 1336 aa13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 CABYRO75952 493 aa13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 EDNRBP24530 442 aa13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 ITGA7Q13683 1181 aa13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 STOX1Q6ZVD7 989 aa13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 RALYLQ86SE5 291 aaKnown RBP13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 SKAP1Q86WV1 359 aa13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 MCF2L2Q86YR7 1114 aa13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 FAM126BQ8IXS8 530 aa13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 SLC43A3Q8NBI5 491 aa13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 NCOA7Q8NI08 942 aa13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 SYTL5Q8TDW5 730 aaPredicted RBP13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 TAAR1Q96RJ0 339 aa13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 MTMR10Q9NXD2 777 aa13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 COL20A1Q9P218 1284 aa13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 MAD2L2Q9UI95 211 aa13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 MRPL11Q9Y3B7 192 aaKnown RBP13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 RBM8AQ9Y5S9 174 aaKnown RBP13.91□□□□□ -0.18
CCHCR1-215ENST00000488920 ERICH2A1L162 156 aa13.9□□□□□ -0.18
CCHCR1-215ENST00000488920 PALM3A6NDB9 673 aaPredicted RBP13.9□□□□□ -0.18
CCHCR1-215ENST00000488920 B4DLN1 442 aa13.9□□□□□ -0.18
CCHCR1-215ENST00000488920 TLR3O15455 904 aaKnown RBP13.9□□□□□ -0.18
CCHCR1-215ENST00000488920 CD4P01730 458 aa13.9□□□□□ -0.18
CCHCR1-215ENST00000488920 MRPL12P52815 198 aaKnown RBP13.9□□□□□ -0.18
CCHCR1-215ENST00000488920 OR6J1Q8NGC5 347 aa13.9□□□□□ -0.18
CCHCR1-215ENST00000488920 COPS5Q92905 334 aa13.9□□□□□ -0.18
CCHCR1-215ENST00000488920 FAM161BQ96MY7 647 aa13.9□□□□□ -0.18
CCHCR1-215ENST00000488920 AMNQ9BXJ7 453 aa13.9□□□□□ -0.18
CCHCR1-215ENST00000488920 PPP1R12CQ9BZL4 782 aa13.9□□□□□ -0.18
CCHCR1-215ENST00000488920 TRPV6Q9H1D0 765 aa13.9□□□□□ -0.18
CCHCR1-215ENST00000488920 PPP1R11O60927 126 aaPredicted RBP13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 MYL3P08590 195 aa13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 TXNP10599 105 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 CYP2C18P33260 490 aa13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 GRM4Q14833 912 aa13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 WTAPQ15007 396 aa13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 SART3Q15020 963 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 PPP2R5BQ15173 497 aa13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 SLC35G1Q2M3R5 365 aa13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 TMEM67Q5HYA8 995 aa13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 MFSD5Q6N075 450 aa13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 NSUN6Q8TEA1 469 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 SCFD2Q8WU76 684 aa13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 MTMR8Q96EF0 704 aa13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 RNPC3Q96LT9 517 aaKnown RBP13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 RMDN3Q96TC7 470 aa13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 LAMA4Q16363 1823 aa13.89□□□□□ -0.19
CCHCR1-215ENST00000488920 LTBP2Q14767 1821 aa13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 OPLAHO14841 1288 aa13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 ZBTB5O15062 677 aa13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 ARIH2O95376 493 aa13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 CFBP00751 764 aa13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 CSF2RAP15509 400 aa13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 CPT1AP50416 773 aa13.88□□□□□ -0.19
CCHCR1-215ENST00000488920 ANTXR2P58335 489 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms