RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 ANO3Q9BYT9 981 aa12.43□□□□□ -0.42
COL21A1-211ENST00000488912 MRPL11Q9Y3B7 192 aaKnown RBP12.43□□□□□ -0.42
COL21A1-211ENST00000488912 PIK3CDO00329 1044 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 CFBP00751 764 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 PFKFB1P16118 471 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 DSG3P32926 999 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 AP3B2Q13367 1082 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 COG2Q14746 738 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 RESP18Q5W5W9 173 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 GADL1Q6ZQY3 521 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 TBC1D5Q92609 795 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 CSRNP2Q9H175 543 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 TMEM60Q9H2L4 133 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 KCNH4Q9UQ05 1017 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 A0A0G2JMZ2 1700 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 CXCL11O14625 94 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 ZBED4O75132 1171 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 CELF2O95319 508 aaKnown RBP12.42□□□□□ -0.42
COL21A1-211ENST00000488912 GJA5P36382 358 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 FMR1NBQ8N0W7 255 aaPredicted RBP12.42□□□□□ -0.42
COL21A1-211ENST00000488912 REPS2Q8NFH8 660 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 FERMT2Q96AC1 680 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 NUP62CLQ9H1M0 184 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 GBA2Q9HCG7 927 aaPredicted RBP12.42□□□□□ -0.42
COL21A1-211ENST00000488912 DDX19AQ9NUU7 478 aaKnown RBP12.42□□□□□ -0.42
COL21A1-211ENST00000488912 ADAMTS5Q9UNA0 930 aa12.42□□□□□ -0.42
COL21A1-211ENST00000488912 CTDP1Q9Y5B0 961 aaPredicted RBP12.42□□□□□ -0.42
COL21A1-211ENST00000488912 VWA3AA6NCI4 1184 aa12.41□□□□□ -0.42
COL21A1-211ENST00000488912 SPDYE3A6NKU9 549 aa12.41□□□□□ -0.42
COL21A1-211ENST00000488912 SPDYE16A6NNV3 312 aaPredicted RBP12.41□□□□□ -0.42
COL21A1-211ENST00000488912 NEMFO60524 1076 aa12.41□□□□□ -0.42
COL21A1-211ENST00000488912 TDP2O95551 362 aa12.41□□□□□ -0.42
COL21A1-211ENST00000488912 FDX1P10109 184 aa12.41□□□□□ -0.42
COL21A1-211ENST00000488912 ALAS1P13196 640 aa12.41□□□□□ -0.42
COL21A1-211ENST00000488912 IL17AQ16552 155 aa12.41□□□□□ -0.42
COL21A1-211ENST00000488912 CAMK4Q16566 473 aa12.41□□□□□ -0.42
COL21A1-211ENST00000488912 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
COL21A1-211ENST00000488912 PROCA1Q8NCQ7 364 aaPredicted RBP12.41□□□□□ -0.42
COL21A1-211ENST00000488912 HOMER2Q9NSB8 354 aa12.41□□□□□ -0.42
COL21A1-211ENST00000488912 PRDM4Q9UKN5 801 aa12.41□□□□□ -0.42
COL21A1-211ENST00000488912 HPSEQ9Y251 543 aa12.41□□□□□ -0.42
COL21A1-211ENST00000488912 NFIBO00712 420 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 FKBP1BP68106 108 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 ARL6IP4Q66PJ3 421 aaKnown RBP12.4□□□□□ -0.42
COL21A1-211ENST00000488912 FCHSD1Q86WN1 690 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 POTEDQ86YR6 584 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 CLEC4DQ8WXI8 215 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 SLC10A4Q96EP9 437 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 CLSTN2Q9H4D0 955 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 MYPNQ86TC9 1320 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 FAM237AA0A1B0GTK4 181 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 GCOM1H8Y6P7 765 aaPredicted RBP12.4□□□□□ -0.42
COL21A1-211ENST00000488912 SLC37A4O43826 429 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 KINO60870 393 aaKnown RBP12.4□□□□□ -0.42
COL21A1-211ENST00000488912 FOSP01100 380 aaPredicted RBP12.4□□□□□ -0.42
COL21A1-211ENST00000488912 POLR2MP0CAP2 368 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 ZNF445P59923 1031 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 MOGSQ13724 837 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 MUM1L1Q5H9M0 696 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 MCTP2Q6DN12 878 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 USP49Q70CQ1 688 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 CRYGNQ8WXF5 182 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 PDCL3Q9H2J4 239 aa12.4□□□□□ -0.42
COL21A1-211ENST00000488912 ZNF214Q9UL59 606 aaPredicted RBP12.4□□□□□ -0.42
COL21A1-211ENST00000488912 UNCXA6NJT0 531 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 LAD1O00515 517 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 ITGBL1O95965 494 aaPredicted RBP12.39□□□□□ -0.43
COL21A1-211ENST00000488912 ARHGAP4P98171 946 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 ORC2Q13416 577 aaPredicted RBP12.39□□□□□ -0.43
COL21A1-211ENST00000488912 TMEM132BQ14DG7 1078 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 CHADLQ6NUI6 762 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 TEX2Q8IWB9 1127 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 TNMDQ9H2S6 317 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 HOXC10Q9NYD6 342 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 RIPK3Q9Y572 518 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 ZNF202O95125 648 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 OR52Z1P0C646 297 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 HOXA7P31268 230 aaPredicted RBP12.39□□□□□ -0.43
COL21A1-211ENST00000488912 SREBF1P36956 1147 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 HSD17B4P51659 736 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 OAZ1P54368 228 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 CST9Q5W186 159 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 SNRNP48Q6IEG0 339 aaKnown RBP12.39□□□□□ -0.43
COL21A1-211ENST00000488912 PPP4R3AQ6IN85 833 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 GAS2L3Q86XJ1 694 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 C2orf69Q8N8R5 385 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 SYMPKQ92797 1274 aaKnown RBP12.39□□□□□ -0.43
COL21A1-211ENST00000488912 EPSTI1Q96J88 318 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 KCNH3Q9ULD8 1083 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 AGTPBP1Q9UPW5 1226 aa12.39□□□□□ -0.43
COL21A1-211ENST00000488912 GOLGA6L3A6NEY3 463 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 PRPHP41219 470 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 SYKP43405 635 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 USP11P51784 963 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 POTEEQ6S8J3 1075 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 TRERF1Q96PN7 1200 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 FAM13BQ9NYF5 915 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 DDX25Q9UHL0 483 aaKnown RBP12.38□□□□□ -0.43
COL21A1-211ENST00000488912 PNMA2Q9UL42 364 aa12.38□□□□□ -0.43
COL21A1-211ENST00000488912 GCFC2P16383 781 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms