RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 DUSP28Q4G0W2 176 aa30.52■■■□□ 2.48
RNF220-216ENST00000488865 C16orf59Q7L2K0 433 aa30.52■■■□□ 2.48
RNF220-216ENST00000488865 DGKHQ86XP1 1220 aa30.52■■■□□ 2.48
RNF220-216ENST00000488865 CSF2RAP15509 400 aa30.51■■■□□ 2.47
RNF220-216ENST00000488865 PTGS1P23219 599 aa30.51■■■□□ 2.47
RNF220-216ENST00000488865 TMEM240Q5SV17 173 aa30.51■■■□□ 2.47
RNF220-216ENST00000488865 GPATCH4Q5T3I0 446 aaKnown RBP30.51■■■□□ 2.47
RNF220-216ENST00000488865 RNF207Q6ZRF8 634 aa30.51■■■□□ 2.47
RNF220-216ENST00000488865 PHF6Q8IWS0 365 aaKnown RBP eCLIP30.51■■■□□ 2.47
RNF220-216ENST00000488865 PPP1R12CQ9BZL4 782 aa30.51■■■□□ 2.47
RNF220-216ENST00000488865 GRIN2DO15399 1336 aa30.5■■■□□ 2.47
RNF220-216ENST00000488865 NEDD4P46934 1319 aa30.5■■■□□ 2.47
RNF220-216ENST00000488865 HIP1O00291 1037 aa30.5■■■□□ 2.47
RNF220-216ENST00000488865 CCDC178Q5BJE1 867 aa30.5■■■□□ 2.47
RNF220-216ENST00000488865 TMEM63BQ5T3F8 832 aa30.5■■■□□ 2.47
RNF220-216ENST00000488865 DIAPH3Q9NSV4 1193 aa30.5■■■□□ 2.47
RNF220-216ENST00000488865 RBM47A0AV96 593 aaKnown RBP30.49■■■□□ 2.47
RNF220-216ENST00000488865 RASIP1Q5U651 963 aa30.49■■■□□ 2.47
RNF220-216ENST00000488865 PSRC1Q6PGN9 363 aaPredicted RBP30.49■■■□□ 2.47
RNF220-216ENST00000488865 CWC27Q6UX04 472 aaKnown RBP30.49■■■□□ 2.47
RNF220-216ENST00000488865 SLC30A10Q6XR72 485 aa30.49■■■□□ 2.47
RNF220-216ENST00000488865 MYLIPQ8WY64 445 aa30.49■■■□□ 2.47
RNF220-216ENST00000488865 WDR11Q9BZH6 1224 aa30.49■■■□□ 2.47
RNF220-216ENST00000488865 LAMA4Q16363 1823 aa30.48■■■□□ 2.47
RNF220-216ENST00000488865 DNAJB2P25686 324 aa30.48■■■□□ 2.47
RNF220-216ENST00000488865 CALML3P27482 149 aa30.48■■■□□ 2.47
RNF220-216ENST00000488865 IQCA1Q86XH1 822 aa30.48■■■□□ 2.47
RNF220-216ENST00000488865 MAFAQ8NHW3 353 aaPredicted RBP30.48■■■□□ 2.47
RNF220-216ENST00000488865 YTHDC1Q96MU7 727 aaKnown RBP30.48■■■□□ 2.47
RNF220-216ENST00000488865 MPHOSPH6Q99547 160 aaKnown RBP30.48■■■□□ 2.47
RNF220-216ENST00000488865 ZKSCAN3Q9BRR0 538 aa30.48■■■□□ 2.47
RNF220-216ENST00000488865 CYP2C18P33260 490 aa30.47■■■□□ 2.47
RNF220-216ENST00000488865 RPS6P62753 249 aaKnown RBP30.47■■■□□ 2.47
RNF220-216ENST00000488865 DNERQ8NFT8 737 aa30.47■■■□□ 2.47
RNF220-216ENST00000488865 ANKS1AQ92625 1134 aa30.47■■■□□ 2.47
RNF220-216ENST00000488865 HIPK3Q9H422 1215 aa30.47■■■□□ 2.47
RNF220-216ENST00000488865 CUL9Q8IWT3 2517 aa30.47■■■□□ 2.47
RNF220-216ENST00000488865 RGS22Q8NE09 1264 aa30.46■■■□□ 2.47
RNF220-216ENST00000488865 EXOC6Q8TAG9 804 aa30.46■■■□□ 2.47
RNF220-216ENST00000488865 DSCC1Q9BVC3 393 aa30.46■■■□□ 2.47
RNF220-216ENST00000488865 MAF1Q9H063 256 aa30.46■■■□□ 2.47
RNF220-216ENST00000488865 IL23AQ9NPF7 189 aa30.46■■■□□ 2.47
RNF220-216ENST00000488865 POLR3EQ9NVU0 708 aa30.46■■■□□ 2.47
RNF220-216ENST00000488865 PRUNE2Q8WUY3 3088 aa30.45■■■□□ 2.47
RNF220-216ENST00000488865 KDM4AO75164 1064 aa30.45■■■□□ 2.47
RNF220-216ENST00000488865 EDNRBP24530 442 aa30.45■■■□□ 2.47
RNF220-216ENST00000488865 PDE4DQ08499 809 aa30.45■■■□□ 2.47
RNF220-216ENST00000488865 ZNF365Q70YC5 407 aa30.45■■■□□ 2.47
RNF220-216ENST00000488865 PNMA1Q8ND90 353 aa30.45■■■□□ 2.47
RNF220-216ENST00000488865 B4GALT4O60513 344 aa30.44■■■□□ 2.46
RNF220-216ENST00000488865 GOLGA8HP0CJ92 632 aa30.44■■■□□ 2.46
RNF220-216ENST00000488865 ACRP10323 421 aa30.44■■■□□ 2.46
RNF220-216ENST00000488865 FOSL2P15408 326 aa30.44■■■□□ 2.46
RNF220-216ENST00000488865 CPT1AP50416 773 aa30.44■■■□□ 2.46
RNF220-216ENST00000488865 PSMC6P62333 389 aa30.44■■■□□ 2.46
RNF220-216ENST00000488865 TRPV6Q9H1D0 765 aa30.44■■■□□ 2.46
RNF220-216ENST00000488865 B4DLN1 442 aa30.43■■■□□ 2.46
RNF220-216ENST00000488865 NKRFO15226 690 aaKnown RBP eCLIP30.43■■■□□ 2.46
RNF220-216ENST00000488865 MRPL12P52815 198 aaKnown RBP30.43■■■□□ 2.46
RNF220-216ENST00000488865 HERVK_113Q902F9 699 aa30.43■■■□□ 2.46
RNF220-216ENST00000488865 TIFAQ96CG3 184 aa30.43■■■□□ 2.46
RNF220-216ENST00000488865 KAT14Q9H8E8 782 aa30.43■■■□□ 2.46
RNF220-216ENST00000488865 CTNNA3Q9UI47 895 aa30.43■■■□□ 2.46
RNF220-216ENST00000488865 IMMTQ16891 758 aaKnown RBP30.42■■■□□ 2.46
RNF220-216ENST00000488865 SCFD2Q8WU76 684 aa30.42■■■□□ 2.46
RNF220-216ENST00000488865 ZSCAN10Q96SZ4 725 aaPredicted RBP30.42■■■□□ 2.46
RNF220-216ENST00000488865 NOC4LQ9BVI4 516 aaKnown RBP30.42■■■□□ 2.46
RNF220-216ENST00000488865 UBA5Q9GZZ9 404 aa30.42■■■□□ 2.46
RNF220-216ENST00000488865 ALDH8A1Q9H2A2 487 aaPredicted RBP30.42■■■□□ 2.46
RNF220-216ENST00000488865 ZNF576Q9H609 170 aa30.42■■■□□ 2.46
RNF220-216ENST00000488865 B4E1Z4 1266 aa30.41■■■□□ 2.46
RNF220-216ENST00000488865 PURAQ00577 322 aaKnown RBP30.41■■■□□ 2.46
RNF220-216ENST00000488865 GRIN2CQ14957 1233 aa30.41■■■□□ 2.46
RNF220-216ENST00000488865 PPP2R5BQ15173 497 aa30.41■■■□□ 2.46
RNF220-216ENST00000488865 USH1GQ495M9 461 aa30.41■■■□□ 2.46
RNF220-216ENST00000488865 BRDTQ58F21 947 aaPredicted RBP30.41■■■□□ 2.46
RNF220-216ENST00000488865 OR6J1Q8NGC5 347 aa30.41■■■□□ 2.46
RNF220-216ENST00000488865 MTIF3Q9H2K0 278 aaKnown RBP30.41■■■□□ 2.46
RNF220-216ENST00000488865 CPVLQ9H3G5 476 aa30.41■■■□□ 2.46
RNF220-216ENST00000488865 ZSWIM5Q9P217 1185 aa30.41■■■□□ 2.46
RNF220-216ENST00000488865 UMODL1Q5DID0 1318 aa30.41■■■□□ 2.46
RNF220-216ENST00000488865 FGBP02675 491 aa30.4■■■□□ 2.46
RNF220-216ENST00000488865 CDC37Q16543 378 aaPredicted RBP30.4■■■□□ 2.46
RNF220-216ENST00000488865 ASPRV1Q53RT3 343 aa30.4■■■□□ 2.46
RNF220-216ENST00000488865 ENAHQ8N8S7 591 aaPredicted RBP30.4■■■□□ 2.46
RNF220-216ENST00000488865 MTG1Q9BT17 334 aaPredicted RBP30.4■■■□□ 2.46
RNF220-216ENST00000488865 PBX4Q9BYU1 374 aa30.4■■■□□ 2.46
RNF220-216ENST00000488865 KRT23Q9C075 422 aa30.4■■■□□ 2.46
RNF220-216ENST00000488865 GPHNQ9NQX3 736 aaPredicted RBP30.4■■■□□ 2.46
RNF220-216ENST00000488865 RAD50Q92878 1312 aa30.4■■■□□ 2.46
RNF220-216ENST00000488865 SUPT20HL2P0C7V6 817 aa30.39■■■□□ 2.46
RNF220-216ENST00000488865 COL25A1Q9BXS0 654 aaPredicted RBP30.39■■■□□ 2.46
RNF220-216ENST00000488865 CNNM2Q9H8M5 875 aa30.39■■■□□ 2.46
RNF220-216ENST00000488865 ABCB11O95342 1321 aa30.39■■■□□ 2.46
RNF220-216ENST00000488865 GRXCR1A8MXD5 290 aa30.38■■■□□ 2.45
RNF220-216ENST00000488865 KPNA6O60684 536 aa30.38■■■□□ 2.45
RNF220-216ENST00000488865 MYL3P08590 195 aa30.38■■■□□ 2.45
RNF220-216ENST00000488865 ADGRF4Q8IZF3 695 aa30.38■■■□□ 2.45
RNF220-216ENST00000488865 WNT8AQ9H1J5 351 aa30.38■■■□□ 2.45
RNF220-216ENST00000488865 PBX2P40425 430 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms